Bos indicus (zebu cattle): 109561924
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Entry
109561924 CDS
T04792
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
109561924 (COL23A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
biu00536
]
109561924 (COL23A1)
Glycosaminoglycan binding proteins [BR:
biu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109561924 (COL23A1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
109561924
NCBI-ProteinID:
XP_019820321
UniProt:
A0A6P5C408
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Position
7:complement(38663730..39062452)
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AA seq
518 aa
AA seq
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MLDERAMSPGRRAYEDKRNGDAAGGGGGPVSPATGARAWAVSALCLLLSASSAVACLLLA
VQAAALQGRVAALEEERELLLRAGTPDALAAWAEPRLERLLREKLEGPVKIRTVREAPTD
CVCPPGPPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPQG
DPGQDGAAGPPGPPGPPGARGPPGDTGKDGPRGAPGPEGPKGEAGQDGATGPSGPPGPKG
DDGIPGQPGLSGPPGPKGEPGHPGTDGATGQRGPPGLKGEQGDTVVIDYDGRILDALKGP
PGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEAGPTGPKGEAGEMGLSGL
PGANGPKGEKGESASDKLQESLAQIIAEPGPPGPPGPPGPMGLQGMQGPKGLDGAKGEKG
SSGERGPTGLPGPAGPPGLIGLPGTKGEKGRPGEPGLDGFPGPRGEKGDRSERGEKGDRG
VPGRKGMKGQKGEPGPPGLDQPCPVGPDGLPVPGCWHK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgagcgcgccatgagtccaggccggcgcgcctacgaggacaagcggaacgga
gacgcagctggcggcggcggcggacccgtgagccccgcgactggagcgcgggcctgggcg
gtgagcgcgctgtgcctgctgctctccgcgagctcggcggtcgcctgcctgctgctggcc
gtccaggcggccgcgctacagggccgggtggcggccctcgaggaagagcgggagctgctg
ttgcgcgcggggactcccgacgccttggccgcctgggccgagccgcggctggagcgcctg
ctgcgtgagaagttggagggaccagtcaagatccggacagttcgagaagcaccgacagac
tgtgtctgccccccaggcccccctggacggcgtggcaagcccggaagaagaggtgatccc
ggtcctcctgggcaatcgggacgagatggctacccggggccactgggtctggatggaaag
cctggacttccgggccccaaaggggaaaagggygcaccaggagactttggcccccaggga
gatccagggcaagatggagctgctgggcctccagggcctccaggaccccctggggcccgg
ggccctcctggcgacactgggaaagatggccccaggggagcaccaggcccagagggtccc
aaaggagaagctggacaagatggtgcaacgggcccgagtggacccccaggccccaagggg
gatgacgggataccaggccaaccagggctctctggacccccagggcccaagggggagccc
ggccacccaggcactgatggagccacggggcagcggggtcccccgggcctcaagggygaa
caaggagacacagtggtaattgactacgatggcaggatcttggacgcccttaagggtcct
cctgggccacaggggcccccagggccaccagggatccccggagccaagggcgaactcgga
ttgcctggtgctcctggaatcgacggagagaagggtcccaaaggacagaaaggagaccca
ggagaagccggaccaacaggacccaaaggggaagcaggagaaatgggcttgtcaggcctc
ccgggtgccaacggccccaagggagagaagggagagtctgcatctgacaagctacaggag
agcctggcccagatcatagcagagccagggcccccaggccctcctggtcccccaggcccc
atgggccttcaggggatgcagggtcccaagggcttggatggagcaaagggagagaagggc
tcgtcgggtgagagaggacccaccggcctgcctgggccagctggcccaccaggccttatt
gggctgccaggaaccaaaggagagaagggcagacccggggagccaggactagatggtttc
cctggacctcgaggagaaaaaggagaccggagcgagcgtggagagaagggggatcgcggt
gtcccgggtcggaaaggaatgaaaggccagaagggcgagccgggacccccaggcctggac
cagccgtgtcctgtgggccccgatggactgcctgtgcctggctgctggcataagtga
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