Bos indicus (zebu cattle): 109562437
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Entry
109562437 CDS
T04792
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
biu03037
]
109562437 (RP1L1)
04812 Cytoskeleton proteins [BR:
biu04812
]
109562437 (RP1L1)
Cilium and associated proteins [BR:
biu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
109562437 (RP1L1)
Cytoskeleton proteins [BR:
biu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
109562437 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
109562437
NCBI-ProteinID:
XP_019821077
UniProt:
A0A6P5C7F6
LinkDB
All DBs
Position
8:8548084..8593760
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AA seq
2123 aa
AA seq
DB search
MNSTPRDAPAPGHRECLLPSAARTPSVTQVTPAKKITFLKRGDPRFAGVRVAVHQRAFRS
FGALMDELSQRVPLSFGVRSVTTPRGLHGLSTLEQLQDGGCYLCSDKKPPRTPGGLGQPQ
GRSPSAQQLREFEAPGTASTCKGLKASRRITLVKNGDPXLQQTVVLSHRNTRNLTAFLSK
ASDLLRFPVKHVYTTGGKRVDSLKALLRSPSVLVCAGLEPFRPLVTEDIRRKGSEPSSGQ
TSRNKSGSWGPKAKQSVIHARSRLENRPRQFSLMSERSGHSDPSVFPHRACMCPAPDRHX
LNTPAQLGPLVTGEDIEKNVSVNEDGSLSVEMKVRFHLLGEDPLLCSRRLGRASTLTATS
GEGPDAGEVDLLGCVWKGHSGDPSEPGARGLGPCEVGGVGAFDQGQRQQGSRYEIWMNPL
YISQGEWSASRWRSGLTQNCHSRAPRSQRVASRKRGSKDRASPASSDTPPGGSELNSSCC
SGSLVDAVASCGPHLASGAGEGKGEGAXLGCRDHDGCLKPRTRGLTDALPDSSASARSHE
KCSKRDKLSQGRPSETPQGATQQGVPGSPTVSPLSIANKDPQAEEFGQGAGHPQARNRSG
VRPPSTRGPSASGDDAGGYTPPSACASALGRSRKQESRASTLYSASSSVPSQGAQRACPR
QHHSPKDIHCPVHSSVSRPMPGLSSRDRAHPHGPPPSLSESPQGTWNQASWDPRPPFSGS
LYSQDTRRLSSIPITPGSNSDCVSNFYLPDSPSPETEGGPEFRPCSPALTPSNTSGPFSA
PADGLGEKTRGDRFQPSWPLVLPAGWPEGGRLGAQWGSCCSHLGTSLARGASCGTIQTIP
APQLQGSQRPSSKACWVCSRYCPTPPRTRPLGKRHPSGSRSEGDRSADGKPSGEQVGEEK
LDAWHPRPPGSQGAALGRAVRAVRRGRPRSGPQLRRMVQGKLSGRGGGLEEPEEGGSELL
GALPRASPEAVVRAWLSNIPEEPIKHELEDKGEDVAGHGLEGPQEDPVDKHSPDSLERSV
WARQLPLEQAATEEAEPDKAFPVASSASPKSGEGMPCRGVSETPTEAGTGCGRWEGRVLP
SRVSTSLQIMKALMGSRPXXHSSLPEVSHSAGRRLSRSAQALITCLARLHFFDDDDLGSP
ASKVRFTDSPRYQELLSTFQALWPGSGLRNTELELDLRELGWRQALPALGPHIATEDFRP
TSSSGVDVGSGSGGSGEGSGPCTVDCSLVSEKMELPLSISCQGPDSRTLGNPEVPGNQQL
SSYEAEGAASDNGAEKNGREQTLGGDPDQGDKNTMQEEGVQLEEIKEEKERAELQVEGVR
GFPEEEGVMELGLSGAGSQDGAGVWENKSLNEEEPGDPTAVATQSSSERRGSPPEPPRSL
SERYLDASGSQSGPKAEPPLEKLLGAAETGCGQTLDKITQGAGERGTCKGRRGSLILDPV
WVSKLLKKMEKAFMDHLATATAELCTRWGLQGDHLLDQMVAELQRDVGQRLQDSVEKELL
KVQSWAGGAGTGMPREALHWEASLQTEQRRRRLQALRNLSPFSEQMRGRGPPSFSLEDLP
IFRGALGTQLAVEAKGEEFCPCEACVRKKMAPASPVDAAGSASAPIRKAFDLQHILQKKK
GGCADGETVEVAPAVEREVEPLHRDPSRTSTVQGADGDPELGSGQGPRAEEGDQTLGRDE
DPWGTEEEAGAQEEERKTEPCVGSDPWEGLGXGEQGMGGEEGDLEADCGAEDTGEAHGLG
GGGPGPCGQDAGAETTEALEAAREERSETGGGHGGDEEGGLQVGLGCGQSREASGDRSPT
PGADPLQQRSGPRSGLSSFSTSSLGSCSLLSQKGSEDEPWDRCMRSTEDQAMDIPDPERK
VTGMYPESSASEQEGAPSGTRTPEQGTEKASYTPQRLHRKAWLLLRPWLKPMDRTQVSRW
QDPPQAQRAPFYIPGDWESETLPSVPHCLVAEPGAQRWSLWLPCPRPVLVVRLQKADGLY
STVFAPTLQENHMEELTGVCPCTPQSPSPPPAPPSQKTTRRNSRECVFGLQSNMTGQFRH
AGILLCDPKVLCAQALPVTLGFCPPAADDVSTFGTIRSHTYSPRPPFQEASLKPSESQES
PQNAAEAAILESTQEGLMFLLSP
NT seq
6372 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcactccgagggacgccccggcccccggccaccgcgagtgcctcctgccttct
gcggcccggaccccctctgtcacccaggtcacgccggccaagaagataaccttcctcaag
cgaggggatccccggtttgctggggtccgcgtggctgttcaccagcgcgccttcaggagc
tttggggccctgatggacgagctctctcagcgggtaccgctctcctttggggtgcgctcg
gtcaccacaccccggggcctgcacggcctcagcaccctggagcagctgcaggatggtggc
tgctatctctgctccgataagaagccccccaggactcccggtgggctgggccagccccag
gggagaagcccttccgctcagcagttgagggaatttgaggcaccgggaacagcctctacc
tgcaaaggtctcaaagcctcgaggaggatcacactggttaagaacggggaccctcrgctc
cagcagacagtggtgctcagccacagaaacaccaggaacctgacggcctttctcagcaaa
gcgtcggacctactgcgctttcccgtgaagcatgtgtacacgaccggtgggaaaagggtg
gactctctgaaggctctgctgcgaagcccctctgtgctggtgtgygccggtctcgagccc
ttcagaccrctggtgacggaagatatcagaagaaaaggaagtgaaccttcatctgggcag
acttcaaggaacaaaagtgggagctgggggcccaaggccaaacagagcgtgatccacgca
cggtccaggttggagaacaggccacggcagttctccttgatgtcggagaggtcggggcac
agcgacccctcggtgttcccgcatcgtgcctgcatgtgccctgccccggacaggcaccst
ctgaacactcctgcccagctcggccccttggtgacaggtgaagacatcgagaagaatgtg
agcgtgaatgaggatggcagcctatctgtagagatgaaagtccgcttccacctgctgggg
gaggacccgcttctgtgttccaggaggctcgggagggccagcaccctcaccgcgaccagt
ggggagggccccgatgctggggaggtggatctgcttggctgtgtgtggaagggccactct
ggggacccctcagagcctggggcaaggggactggggccctgcgaggtgggaggggtggga
gcctttgaccaaggccagcggcagcaggggtctagatacgagatctggatgaaccccctg
tacatctcccagggagagtggtcagcctctcggtggaggtctgggctgacccagaactgc
cactccagggccccccggagccaaagggtagccagcaggaaaagagggagcaaggacagg
gccagccctgcctccagcgacacaccccctggaggctctgagctaaactcctcctgctgc
tctgggtccctggtggatgctgtggccagctgtggcccacatctggcctcgggggctggt
gaaggcaaaggcgagggagcagygctgggctgcagggaccatgatggctgcctgaaaccc
aggacccgcggcctgacagatgctcttcctgactcctccgcaagcgccaggtctcatgag
aagtgcagcaaaagggacaagctgtcccagggccgccccagcgagactccccagggggcc
acccagcagggagttccgggttcccccactgtgagccccttgtctatagcgaacaaggac
ccacaggcagaggagtttggacagggagcagggcacccccaggccagaaacaggtctggg
gtgaggccaccctcgactcggggcccatctgcttctggggatgatgcgggaggctacacc
ccaccttctgcctgtgcctcagccctgggcagaagcagaaagcaggagagcagagccagc
accctgtattcagccagcagttctgttcccagccaaggggcccagagggcctgccccagg
cagcaccacagccctaaggacattcactgcccagtccactcgtctgtgtcccggccaatg
ccagggctgtccagcagagacagggcccacccacacggccccccacccagcctttctgaa
agcccacagggcacctggaaccaggcttcttgggacccaaggccacccttctcaggctct
ctttattcccaggacacacgcaggctaagcagcatccccattacccctgggagcaattct
gactgtgtttccaatttctatctccccgattctccctctcctgagactgaagggggccct
gagttcaggccgtgctcaccggctctcacaccttcaaacacatccggccctttcagtgcc
ccagctgatggcctgggtgaaaagactaggggtgacagattccagccttcctggcccttg
gtcctgccagctgggtggcctgagggagggaggctgggagcacaatggggcagctgctgt
tcacacctgggaacatccctggctcgcggagcctcctgtgggacgatacagacgatacca
gccccacagctgcagggcagccagaggccctcctccaaggcctgctgggtgtgcagcagg
tactgtcccacgccccccaggacacggcccttgggcaagaggcatccttcaggcagccgc
agcgagggtgaccgcagcgctgatgggaagcctagtggggagcaggtgggggaagaaaag
ttggatgcntggcatccgcggccccctggctctcagggagcagccttggggagagcagtc
agagctgtgagaaggggcaggcctcgcagcggtccccagctcaggagaatggtccaaggg
aagctctcaggcagaggaggaggcctggaggagccagaggaaggtggcagtgagctgctg
ggagctctgccccgagcctccccagaagctgtggtccgtgcgtggctgagcaacatcccg
gaagagcccatcaaacacgagctggaggacaagggcgaggatgtggccgggcatggcctg
gaaggcccccaagaggaccctgtggacaaacattccccagacagtctggaaagatcagtt
tgggccagacaactgcccctggaacaggcggccactgaggaagcagaaccagataaagcc
tttccagtggctagcagtgccagtcccaagtcaggagagggtatgccttgccgtggagtg
tcagaaacccctacggaggctggaacaggctgtggacggtgggaggggcgcgtgctgccc
agcagggtctccacctccttacagatcatgaaggcactgatggggtcccggccgnnnnng
cacagcagtctgcctgaagtgtcccactcagcgggcaggaggctcagccgctcggcccag
gccctcatcacctgtctygccaggctccacttctttgatgatgatgatcttgggtctccc
gctagcaaagtgaggttcacagactcccctcggtaccaggagctcctaagtaccttccag
gccctgtggccagggagtggcctcaggaacactgagctggaattggacctccgggagctc
ggctggcgccaggccctgccggccctcgggccccacattgcaaccgaggacttcaggccc
acgtcctcctctggggtggatgtcggcagtggttctggtggctcgggggagggcagcgga
ccctgcaccgtggactgcagcttggtgtctgagaagatggagctgcccttaagcatctcc
tgccaggggcctgattccagaaccttggggaacccagaagttccgggaaaccaacagctg
agtagttatgaggctgagggtgctgccagtgacaacggggcagaaaaaaacggcagggag
cagacgcttgggggtgacccagaccaaggagataaaaacacaatgcaggaagagggggta
caattggaggaaataaaagaagaaaaagaaagagcagaactgcaagtagagggtgtcaga
gggtttccggaagaggaaggagtcatggaactaggattgtcaggggcaggctctcaggat
ggggctggtgtctgggaaaataagagcctgaatgaagaggagccaggagaccccactgcc
gttgccacgcagagctcttcagagaggagagggagcccgccagagccccccaggagcctc
agcgagaggtacctggatgccagtgggagtcaaagtggccccaaagctgagccccctttg
gagaagttgctcggagcagctgagactggctgtgggcaaaccctggacaagatcacccag
ggggctggtgagaggggcacttgcaagggccgcagggggtctctgatcttggaccccgtg
tgggtgtccaagttgttgaagaagatggagaaggccttcatggaccacctcgccactgcc
acggccgagctctgcacccgctggggcctgcagggcgaccacctgctggaccagatggtg
gccgagctgcagcgggatgtgggccagcggctccaggacagtgtggagaaggagcttctc
aaggtccagagctgggcagggggcgcgggcacggggatgcccagggaagccctccactgg
gaggcgtccctgcagaccgagcagcgcaggcggcgcctccaggccctgcgcaacctctcg
cccttctccgagcagatgcgaggccgggggcccccctccttctccctggaggacctgccg
atcttcagaggagccctggggacccaacttgcggtagaggccaagggggaggagttctgt
ccctgcgaggcctgcgtgaggaagaaaatggctcccgcatccccagtggatgctgcgggg
tcagccagcgcacccatcagaaaggccttcgacctgcaacacattctgcagaagaagaaa
ggagggtgtgctgatggagagacagtggaggtggcccccgctgtggagagggaggtggag
ccccttcacagggacccctcgaggacaagcactgtccagggagctgatggagaccctgag
ctcggatcaggccagggccccagagcggaggagggggaccagacccttggcagggatgaa
gacccctgggggacagaggaggaggcgggtgctcaggaggaagagaggaaaacagagccc
tgtgtaggcagcgacccctgggaggggctggggagsggggagcagggcatgggtggtgag
gaaggagacctggaggcrgactgtggggctgaggacactggggaggctcatggcctggga
ggaggtggtccgggtccatgcggacaagatgctggtgctgaaacaacagaggccctggag
gctgcaagggaggagcggtcagagacaggaggaggacatggaggtgacgaagaagggggc
cttcaggttggcctgggatgtggccagtcccgtgaggcttctggagacaggagcccgacc
ccaggggcagatccccttcaacagcggtcaggccccaggtcaggcctctcttccttcagc
acgtcctctctggggagctgctctctgctctctcagaaaggctccgaagatgagccatgg
gacagatgcatgaggagcactgaagaccaggccatggacatccctgatccagagagaaaa
gtcacaggcatgtacccagaaagctccgcttctgagcaagaaggagccccatcaggcacc
agaactccagagcaagggacagagaaagcatcctacacgccgcagcggctgcacaggaag
gcatggctgctgctgaggccgtggctgaagcccatggacaggacccaggtgtcccggtgg
caggatcccccgcaggcgcagagagccccattctacattccaggagactgggaatcagag
actttgccctcagttccacattgcctagtggctgagccaggagcccagcgctggtccctc
tggctcccatgcccacggccagtgctcgtggtcaggctgcagaaggcggatggcttgtac
tccacagtcttcgcccccaccctccaggagaaccacatggaggaactcacgggagtgtgt
ccttgtactccacagtctccctcaccgccccctgcccccccgtcgcagaaaaccacacgg
aggaactcacgggagtgtgtctttgggctccagagtaacatgacgggtcagttccgacac
gccggcatcttgctctgtgatcccaaagtgctttgcgcccaagcccttcctgtgaccctg
ggtttctgcccaccagcagcagatgatgtcagcacatttgggaccatcaggtctcacacc
tacagccccaggcctccattccaggaggcttccctgaagccttcggaatctcaggaatcc
ccccaaaacgctgcagaggcagcaattctggagtccactcaggaaggactcatgttcttg
ttgtctccctaa
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integrated database retrieval system
