Bos indicus (zebu cattle): 109562924
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Entry
109562924 CDS
T04792
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03082
ATP-dependent chromatin remodeling
biu04714
Thermogenesis
biu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109562924 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
109562924 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
109562924 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109562924 (SMARCA2)
03036 Chromosome and associated proteins [BR:
biu03036
]
109562924 (SMARCA2)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109562924 (SMARCA2)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109562924 (SMARCA2)
Chromatin remodeling factors
BAF complex
109562924 (SMARCA2)
PBAF complex
109562924 (SMARCA2)
GBAF(ncBAF) complex
109562924 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
109562924
NCBI-ProteinID:
XP_019821578
UniProt:
A0A6P5C7F3
LinkDB
All DBs
Position
8:complement(44458983..44794482)
Genome browser
AA seq
1572 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPSM
GSADFPQEGMHQMHKPMDGMHDKGVEDIHCGSMKGTAMRPPHPGMGPPQSPMDQHSQGYM
SPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGPLIPGDPQAMNQPNRGPSPFSPVQLHQ
LRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQPPPQPQPQPQPQQPQPQQQALVN
YNRPSGPGPELSGPSPPQKLPVPAPSGRPSPAPPAAAPPPAAAVPGPSVPQPAPGQPSPI
LQLQQKQSRISPVQKPQGLDPVEIMQEREYRLQARIAHRIQELENLPGSLPPDLRTKATV
ELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKI
EQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERI
EKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKK
RRRKKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLD
AWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEKILLDPNSEEVSEKDAKQII
ETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSL
YNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPS
VVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN
HHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA
MTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILY
RHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNG
VINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDG
TTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQD
RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQ
AILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED
ELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEME
EEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYK
DRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN
HKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNE
EEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDE
NEQSEASGTDDE
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacccacagaccctggcgcgatgccccacccggggccttcgccagggccggga
ccctctcctggacccattcttgggcccagtccgggacccggaccatcccccggttccgtc
cacagtatgatggggccaagtccrgggcctcctagtgtctcrcaccctatgccgtcgatg
gggtctgctgacttccctcaggagggcatgcatcagatgcacaagcccatggatggtatg
cacgacaagggggttgaagatatccattgtggatccatgaaaggcactgctatgcgacca
cctcacccaggaatgggccctcctcagagtccgatggatcagcacagccaaggttacatg
tcaccrcacccgtctccgctgggagccccagagcacgtgtccagccctatatcaggaggc
ggcccgaccccaccacagatgccaccragccagccaggacccctcatcccaggcgaccct
caggcgatgaaccaacccaacaggggtccctctcctttcagtcccgtccagctgcatcag
ctccgagcccagattttagcttacaagatgctggcccggggccagcccctccccgaaaca
ctgcagcttgcagtccaggggaaaaggacgttgcctggcatgcagcaacagccgccgcca
cagccccaaccccagcctcagccgcagcagccacagccgcagcagcaggcccttgttaac
tacaacagaccatctggcccggggcctgagctgagcggcccgagccccccgcagaagctg
ccggtgcctgcgcccagcggccggccttcacccgcgcctcccgccgcagcgccaccgccc
gcggctgccgtgcccggaccctccgtaccgcagccggccccggggcagccctcgcccatc
ctgcagctgcagcagaagcagagccggatcagccctgtccagaaaccgcaaggcctggac
cccgtggagattatgcaggagcgggagtacagacttcaggctcgcatagcccataggata
caggagctggaaaatctgcctggctctttgccaccagacttacgaaccaaagcaaccgtg
gaactgaaagcacttcggttactcaatttccaacgtcagctgcgacaggaggtggtggcc
tgcatgcgacgggacacgaccctggagacggccctcaactccaaagcgtacaagcggagc
aagcgccagaccctgagggaagcccgcatgacggagaagctggagaagcagcagaagaty
gagcaggagcggaagcgaaggcagaagcaccaggaatacctgaacagtattttgcaacat
gcaaaagactttaaggagtatcatcggtctgtggctggcaagatccagaagctttccaaa
gcagtggccacctggcatgccaacaccgaaagggagcagaagaaagagacggagcggatt
gagaaggagagaatgcggaggctgatggctgaagatgaagagggctatagaaaactgatt
gatcaaaagaaagacaggcgtttagcatacctcttgcagcagactgatgagtatgtggcc
aacctgactaacctggtttgggagcacaagcaagcccaggcggccaaagagaagaagaag
aggaggaggaagaagaagaaggckgaagagaacgcagaaggaggagagtctgccctggga
ccagatggagagcccatagacgagagcagccagatgagtgacctccccgtcaaagtgact
cacacagaaactggcaaggtcctgtttggcccagaagcacccaaagcaagtcagctggac
gcctggttggaaatgaatcctggttacgaagttgcccctagatcggacagtgaagagagt
gattctgattatgaggaggaggatgaggaggaagagtccagcaggcaggaaactgargag
aaaatacttctggatccaaacagcgaggaggtttcggagaaggacgccaagcagatcatc
gagacagctaagcaagatgtggaygatgagtacagcatgcagtacagtgccagaggctcc
cagtcctactataccgtggcccacgccatctccgagagggtggagaagcagtcggccctc
ctcattaatggaaccctgaagcattatcagctccagggcctggaatggatggtttctctg
tataataacaatttgaacggaatcttagctgatgaaatggggctgggaaagaccatacag
accattgcactcatcacttatctgatggagcacaaacgactcaatggcccctatctcatc
attgttcccctttcgactctatctaactggacgtatgaatttgacaaatgggctccttct
gtggtgaaaatttcttacaagggcacccctgccatgcgtcgctctcttgtcccccagcta
cggagtggcaaattcaacgtcctcctgactacttatgagtacatcataaaagacaagcac
attcttgcaaagatccggtggaaatacatgatagtggacgaaggccaccgcatgaagaat
caccactgcaagctgacgcaggtcctcaacacgcactacgtggcccccagaaggatcctc
ctgaccgggaccccactgcagaataagctcccggaactctgggccctcctcaacttcctc
ctccccaccatttttaagagctgcagcacattcgagcagtggtttaatgcaccgtttgcc
atgactggagagagggtggacttaaatgaagaagaaactatattgatcatcagacgtctg
cataaggtgttgagacccttcttactgaggagactgaagaaagaagttgaatctcagctt
ccggaaaaggttgagtatgtgatcaagtgtgacatgtcagctctgcagaagattctgtat
cgccacatgcaagccaaagggatcctcctcacagatggttcagagaaagataagaagggg
aaaggaggtgctaagacactaatgaacaccatcatgcagttgagaaagatctgcaatcac
ccrtatatgtttcagcacattgaggaatcctttgctgaacacctgggctattcaaatggg
gtcatcaatggggctgagctgtatcgggcctcgggaaagtttgagctacttgatcgtatt
ctgccaaaattgagagcgactaaccaccgcgtgctgcttttctgccagatgacgtccctc
atgaccatcatggaggattactttgcttttcggaacttcctttacctgcgccttgatggt
accaccaagtctgaagatcgtgctgctttgctaaagaaattcaatgaacctgggtcccag
tatttcattttcttgctgagcacaagagctggaggcctgggcttgaatctccaggccgct
gatactgtggtcatctttgacagcgactggaatcctcatcaggacttgcaggcgcaggac
cgcgctcaccgcattggccagcaaaacgaggtccgcgtgctgagactctgcacggtcaac
agtgtggaggagaagatcctcgccgccgccaagtacaagctgaatgtggatcagaaggtg
atccaggcgggcatgtttgatcagaagtcttccagccatgagcggagggccttcctgcag
gccatactggagcatgaagaggaaaatgaggaagaagatgaagtgcccgacgacgagact
ctgaaccaaatgattgctcgacgagaggaggaatttgatctttttatgcgcatggacatg
gaccggcggagagaggatgcccggaacccgaaacgcaagccccgcctgatggaggaagac
gagctgccctcgtggattattaaagatgacgccgaggtggaacggctgacgtgtgaagag
gaggaggagaagatctttgggagggggtctcgccagcggcgggacgtggactacagcgat
gccctcacggagaagcagtggctgagggccattgaagacggcaatttggaagaaatggaa
gaggaagtccggcttaagaagcgaaaaagacgaagaaacgtggataaagatcctgcaaaa
gaagatgtggagaaggccaagaagaggagaggtcgccctccagctgagaagctgtcacca
aatccccctaaactgacgaagcagatgaatgcgatcattgacacggtgataaactacaaa
gacaggtgtaacgtggagaaggtgcccagtaattctcagttggaaatagaaggaaacagt
tcagggcgacagctcagtgaagtcttcattcagttaccttcaagaaaagaattaccagaa
tattatgaattaattaggaaaccggtggatttcaaaaaaataaaggaaagaattcgtaat
cataagtaccggagcctgggtgacctggagaaagacgtcatgctcctctgtcacaatgct
cagacattcaacttggagggatcccagatctatgaagactccatcgtcttacagtcagtg
tttaaaagcgctcggcagaaaattgccaaagaggaagagagtgaggatgaaagcaatgaa
gaggaggaagaggaagatgaagaagagtcggagtcagaggcgaaatctgttaaggtgaaa
atcaagctcaataaaaaggatgagaaaggccgggacaaaggaaaaggcaagaaaaggcca
aaccgaggaaaagccaagcccgtggtgagcgattttgacagcgatgaagagcaagatgaa
aatgaacaatctgaagccagtgggactgatgatgagtga
DBGET
integrated database retrieval system
