Bos indicus (zebu cattle): 109564074
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Entry
109564074 CDS
T04792
Symbol
ARID1B
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03082
ATP-dependent chromatin remodeling
biu04714
Thermogenesis
biu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109564074 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
109564074 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
109564074 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109564074 (ARID1B)
03021 Transcription machinery [BR:
biu03021
]
109564074 (ARID1B)
03036 Chromosome and associated proteins [BR:
biu03036
]
109564074 (ARID1B)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Helix-turn-helix
ARID
109564074 (ARID1B)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109564074 (ARID1B)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109564074 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
109564074
NCBI-ProteinID:
XP_019823190
UniProt:
A0A6P5CC23
LinkDB
All DBs
Position
9:97165243..97542109
Genome browser
AA seq
1783 aa
AA seq
DB search
MSSFTSSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRP
PGAMGGMQYPQQQMPAQYGQQGVSGYCQQGQQPYYNQQPQPPHLPPQAPYLPSQSQQRYQ
PQQDMSQEGYGTRSQPPLASGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSA
VSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASI
PGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSPHPS
PGGQMHPGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPSMGVNAN
SQMHGQGPSQPCGAMPLGRVPSAGMQNRPFPGNMSSMTPSSPGMSQQGGPGMGPPMPTVN
RKAQEAAAAVMQAAANSAQSRQGGFPGMNQSGLMASSSPYSQPMNNSSGLMNTQAPPYSM
TPNMVNSSTASMGLADMMSPSESKLPLPLKADGKEEGSXQPEGKSKDSYSSQGISQPPTP
GNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNE
PERKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELA
TNLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANS
GSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSTVSVHDPFSDASES
SFPKRNSMTPSTPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPTSSM
QDMYNQSPSGAMSSLGMGXRQQFPYGTSMNSRHEPYGQQYPGQGPPSGQPSYGGHQPGLY
PQQTNYKRHMDGMYGPPAKRHEGDMYNMQYGSQQQEMYNQYGSSYSGPDRRPLQGQYPYP
YNRERMQGPGQIQPHAIPPQMMGGPMQSSSNEGPQQSMWATRNDMPYPYQNRQGPGGPTQ
APPYPGMNRTDDMMVPDQRINHESQWPSHVSQRQPYMSSSASMQPXTRPPQSSYQTPPSL
PNHISRAPSPASFQRSLESRMSPSKSPFLPSMKMQKVMPTVPTSQVTGPPPQPPPIRREI
TFPPGSVEASQPVLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDS
TVATFNLSQLSGFLELLVEYFRKCLIDIFGILTEYEVGDPSQKALDHNAAKRDDSQSLAD
DSGREEXDAECIEEEEDEEDEEEEDSGRAETEDRSSAAVASPDATTDLKEKPRQASKFDK
LPIKIVKKNNLFVVDRSDKLGRVQEFSSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRP
PPTLSSTGRKKDQEGKGDSDEHQEKSIIATIDDVLSARPGALPEDANPGTQTESSKFPFG
IHQARSHRNIKLLEDEPRSRDEAPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMS
KHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLV
TLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETL
CKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAA
RAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMA
RVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttttacttcttcacagggcagcccaatggatcccatggtgatgaagagaccc
cagctgtatggcatgggcagtaaccctcattctcagccacagcagagcagcccttaccct
ggaggttcctatggccccccaggcccacagcggtatccaatcggcattcaaggtcggccc
ccgggggccatgggaggcatgcagtacccccagcagcagatgccagctcagtacggacag
cagggtgtgagtggttactgccagcagggccagcagccttactacaaccagcagccgcag
cctccgcaccttcccccgcaggcgccatatctgccctcccagtcccagcagaggtaccag
ccgcagcaggatatgtctcaggaaggctatggaactaggtctcaacctcctctggcttct
ggaaaacctaaccatgaagacttgaacttaatacaacaagaaagaccatcaagtttacca
gacctgtctggctccattgatgacctccccacgggaacrgaagcaactttgagctcagca
gtcagtgcatctgggtccacgagcagccaaggagatcagagcaacccagctcagtcacct
ttctctccgcatgcatctccccatctctccagcatccctgggggcccatcgccttctcct
gtyggctctcctgtaggaagtaaccagtcacgatctggcccaatttctcctgccagtatt
ccaggaagtcagatgccccctcagccacctgggagccagtcagaatccagttctcatcct
gccttgagccagtcaccaatgccacaggaaagaggttttatggcaggcacacaaagaaac
cctcagatgtctcaatatggacctcagcagacaggaccatccatgtcgcctcatccttct
cctggaggccagatgcaccctggaatcagtagctttcagcagagtaactcaagtggaact
tacggtccacagatgagccagtatggaccacaaggtaactactccagacccccaacatac
agtggggtgcccagtgcaagctacagcggcccagggcccagcatgggcgtcaatgccaac
agccagatgcatggacaagggccaagccagccgtgtggtgccatgcccctgggacgagtg
ccatccgcaggcatgcagaacagaccatttcctggaaacatgagcagcatgacccccagt
tctcctggcatgtctcagcagggggggccaggaatggggccaccaatgccaaccgtgaac
cgtaaggcacaggaggcagctgctgcagtgatgcaggccgctgcgaactcggcgcaaagc
aggcaaggcggctttcctggcatgaatcagagtggactcatggcttccagctcaccctac
agccagcccatgaacaacagctctgggctaatgaacacccaggcgcccccctacagcatg
acgcccaatatggtgaacagctcaacagcatctatgggtcttgcagatatgatgtctcct
agtgaatccaaactgcccctgcccctcaaagccgacggtaaagaagaaggcagcrcacag
ccggagggcaagtcgaaggatagctacagctctcagggtatttctcagcccccaaccccc
ggcaacctgccagtcccttccccaatgtcccccagctctgctagcatctcctcatttcat
ggagatgaaagtgatagcattagcagcccaggctggccaaagactccatcaagccctaag
tccagctcatccaccaccactggggaaaagatcacaaaggtgtatgagctggggaatgag
ccagagaggaagctgtgggtggaccgctacctcaccttcatggaggagaggggctccccg
gtctcaagtctgcctgcagtgggcaagaagcccttggacctgttccgactctatgtctgc
gtcaaagagatcggaggtttggcacaggttaataaaaacaagaagtggcgtgagttggca
accaacctaaatgttggcacttcgagcagtgcagcaagctccctgaaaaagcagtatatt
cagtacctgtttgcctttgagtgcaagatcgagcgtggggaggagcccccgccggaagtc
ttcagcacgggcgacaccaagaarcagcccaagctccagccgccatctcctgctaactca
ggatccttgcaaggtccacagaccccccagtcaactggcagtaattcgatggcagaggtt
ccaggtgacctgaagccgcctactccagcctccacccctcatggacagatgaccccaatg
caaggtggaagaagcagcactgtcagtgtgcacgacccattctcagacgcaagtgagtca
tcgttccccaaacgcaactccatgactccaagcaccccgtaccagcagggcatgagcatg
ccagacgtgatgggcaggatgccctacgagcccaacaaggacccctttggggggatgagg
aaagtgcctggaagcagcgagcctttcatgacgcaaggacagatgcccaccagcagcatg
caggatatgtacaaccagagtccatctggagccatgtctagtcttggcatggggncacgg
cagcagtttccctacggaaccagtatgaattctaggcatgaaccttatgggcagcagtac
ccgggccaaggccctccctcaggacagccgtcatatggaggacaccagccaggcctgtac
ccacagcagacgaactacaagcgccatatggatggcatgtatgggcctccagccaaacgc
cacgagggagacatgtacaacatgcagtatggcagccagcagcaggagatgtacaaccag
tacgggagctcctactccggcccggaccggaggcccttgcagggacagtatccttacccc
tacaaccgagagaggatgcagggcccggggcagatacagccacatgccatccctccgcag
atgatgggyggcccgatgcagtcgtcctccaacgaagggcctcagcagagcatgtgggcg
acccgcaacgatatgccttatccctaccagaacaggcaaggccckggcggccccacgcag
gccccgccttaccccggcatgaaccgcaccgatgacatgatggtccctgatcagaggata
aaccacgagagccagtggccttcccacgtcagccagcgtcagccttacatgtcctcgtca
gcctccatgcagcccrtcacgcgcccgcctcagtcgtcctaccagacgccaccctcactg
ccaaaccacatctccagggcgcccagccccgcctccttccagcgctccctggagagccgc
atgtctcccagcaagtcccccttcctcccctccatgaagatgcagaaggtcatgcccacc
gtccccacgtcccaggtcaccgggccacccccccagccgccccccatcagaagggagatc
accttccctcctggctccgtggaagcctcacagccagtcctgaaacaaaggcggaagatt
acctcaaaagatatcgttactccagaggcctggcgtgtgatgatgtcccttaagtcaggt
ctcttggctgaaagtacttgggctttggacactattaatattcttctctatgacgacagc
actgtcgctactttcaatctctcccagttgtccggatttctcgaacttttagtagagtat
ttcaggaaatgcttgattgacatttttggaattcttacggaatatgaagtgggagacccc
agccaaaaagcacttgatcacaatgcagcaaagagagatgacagccagtccttagccgac
gattctgggagagaggaagawgatgctgaatgtattgaggaggaggaggaygaggaggac
gaggaggaggaagacagygggagggcggagacggaggacaggagcagtgcagctgtggcc
tcccccgatgccaccacagatctaaaggagaagcccaggcaagccagtaaatttgacaag
ctgccaatcaagatagtcaaaaagaacaacctgtttgtcgtcgaccgctctgacaagctg
ggtcgcgttcaggagttcagcagtggacttctgcactggcagctcggcgggggagatacc
actgagcacatccagactcacttcgagagcaagatggagattcctcctcgcaggcggccg
cctcccactttgagctccacaggcagaaagaaagaccaggaaggcaaaggggattctgac
gagcaccaagagaaaagcatcatcgcaaccattgatgatgtcctatctgctcggccaggg
gctctgccygaagacgcaaaccctggtacccagaccgaaagcagcaagtttccctttgga
atccatcaagccagaagtcaccgcaacatcaagctgctggaggacgagccaaggagccgg
gacgaggccccgctctgcaccatcgcacactggcaggactcgctggccaagcgctgcatc
tgcgtgtccaatattgtccggagcttgtcttttgtgcctgggaatgacgcggaaatgtcc
aaacacccgggcctggtgctgatcctggggaagctgattcttcttcaccacgagcatccc
gagagaaaacgagcgccgcagacctacgagaaggaggaagacgaggacaaaggggtggcc
tgcagcaaagatgagtggtggtgggactgcctcgaggtcttaagggacaacacgctggtc
accttggccaacatttctgggcagctagacttgtccgcttacacggaaagcatctgcttg
ccaattttggatggcttgctgcactggatggtgtgcccatcagcagaggcacaagacccc
tttcccacggtgggacccaactctgtcctgtcgcctcagagactcgtgctggagacgctc
tgtaaactcagcatccaggacaacaatgtggacctgatcttggccacgcctccgtttagt
cgtcaggagaaattctatgccacgttagttaggtacgttggggatcgcaaaaacccagtc
tgtcgagaaatgtccatggcgcttttatcgaaccttgcccaaggggacgcactggctgca
agggccatagctgtccagaagggaagcatcggaaacttgataagcttcctagaggatggg
gtcacaatggcccagtatcagcagagccagcacaacctcatgcacatgcagcccccgccc
ctagagccccctagcgtggacatgatgtgcagggcggccaaggctctgctggccatggcc
agagtggacgagaaccgctccgagttccttctgcacgagggccgattgctggatatctca
atatcagccgttctgaactctctggtggcatctgtcatctgcgatgtactgtttcagatc
gggcagttatga
DBGET
integrated database retrieval system
