Bos indicus (zebu cattle): 109565188
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Entry
109565188 CDS
T04792
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109565188 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109565188 (WDR33)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109565188 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Collagen
eIF2A
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
109565188
NCBI-ProteinID:
XP_019824522
UniProt:
A0A6P5CGR5
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All DBs
Position
2:4721390..4844653
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AA seq
1336 aa
AA seq
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MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQLSMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGIQRHPGPHGPLGPQGPPGPQGNAGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMLGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQGPP
PQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPHPSQGPI
PFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSR
GPPNHHMGPMSERRHEQSSGPEHGPERGPFRGSQDCRGPPDRRGPHPEFPDDFSRPDDFH
PDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDARGAARGPPGAWEGR
RPGDDRFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDGFPGPEDFGPEENFDASD
ETARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEHFRDAPR
PDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMDAPGGPSEDRGGK
GRGGPGPSQRVPKSGRSSSLDGDHHDGYHRDEPFGGPPGSGTPSRGGRSGSNWGRGSNMN
SGPPRRGASRGGGRGR
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaaattggttctcctcctcggtttttccatatgccaaggttccaacaccag
gcacctcgacaactgttttataagcgrccagattttgcacagcagcaagcaatgcagcag
cttacctttgatggaaaacgaatgagaaaagcagtaaaccgaaaaaccatagactataat
ccatctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcga
gcaattcagcctgatgcaggttattataatgatctggttccacctattgggatgttgaat
aatcctatgaatgcagtaacaacaaagtttgttcgaacatcaacaaataaagtaaaatgt
ccagtatttgttgtcaggtggactccagaaggaagaaggttggtcactggagcttctagt
ggggagttcaccttgtggaatggactcactttcaattttgaaacaatattacaggctcat
gatagcccagtgagagccatgacttggtcacataatgacatgtggatgttgacagcagat
cacggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcacggtgctgatgtgaagtgtgtagactggcatccaacgaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattaaatctcaatggc
aactggctactcacagcatcacgtgaccacctctgtaaacttttcgacatccgaaatctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagctacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggagggtctgatggctctttgttattttggcat
gttggagtagagaaagaagtgggtggaatggagatggcccatgaaggaatgatctggagt
ctggcttggcatccccttggacatattctctgctcaggctcaaatgaccatactagcaaa
ttttggacccgaaaccgaccaggtgataaaatgcgagatcgatacaacctcaacctatta
cctggaatgtctgaagatggagtggaatatgatgaccttgaacctaatagtctggcagta
attccagggatgggaataccagaacaactaaaattagctatggaacaagaacagatgggg
aaagatgaatcaaatgaaattgaaatgacaattccaggtttagattggggaatggaggag
gtaatgcagaaggatcagaaaaaagtgcctcagaagaaggttccgtatgcaaaacctatc
cctgctcagttccagcaggcatggatgcaaaataaagttccaattcctgccccaaacgag
gtattgaatgacagaaaagaagacattaaattggaagagaagaaaaaaacacaagcagaa
atcgaacaagagatggccacattacagtatactaacccacaacttctggagcaacttaaa
attgaaagacttgcacagaaacaggctgagcagattcagcctcctccttcatctggcacc
cctctcctgggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcaacagcctcatccatctcagcagctgtcaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttagaccccctggaccacagggacaaatgggaccacaaggccct
ccactgcatcagggaggtggggggccgcaaggattcatgggaccacaagggccccaggga
ccgccccaggggttgccaaggcctcaggacatgcatgggccccagggaatacaaaggcat
cctggacctcatggccctctgggacctcaaggaccacctggaccccagggtaatgctggt
cctcagggtcatatgggtcctcagggcccacctggcccacaaggtcacataggcccccaa
ggcccacctggtccccagggtcacttgggccctcagggacctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctccccatcctcacgggatacaaggc
gggccagggtctcaagggatccaaggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccaggcccccgagagaaccagggtcctgctccccaaggg
atgatgctgggtcacccacctcaagagatgagaggacctcatcctccaagtggactgctg
ggacatggccctcaggagatgcgaggtcctcaggagatgcgaggcatgcagggccctcca
ccccaaggatcgatgctgggccctccccaggaattgagggggcctccaggctcacaaggt
cagcaggggccgccccagggctctttgggacctccaccccagggtggcatgcaagggccc
cctggacctcagggacagcagaacccggcaagagggccacatccatctcaagggccaata
ccattccagcagcagaaaacagctctgctaggtgatgggccccgggcccccttcaaccag
gaaggacagaatgcaggccccccacccttgataccaggactagggcagcagggagcacaa
ggtcgcatcccccctcttaaccctggacaaggacctggccctaacaaaggtgattcgcgc
ggccctccaaaccatcacatgggcccaatgtcagagaggcggcacgagcagagcagcggc
cctgagcacggtcccgagagggggcctttccggggcagccaggactgcaggggtccccct
gataggcgtggccctcaccccgaattccctgatgacttcagcagaccagacgacttccac
cctgacaagcgctttggccaccggttacgagaatttgaggggcgaggaggccctttacca
caagaagagaagtggaggcgtgggggccctgggcctccattcccccctgaccacagggag
ttcagtgagggggatgcccggggtgcagcccggggccccccaggggcgtgggaaggccgc
agacctggagacgaccgcttcccccgggaccctgaggacccgcggttccgagggcgcaga
gaagaaagcttcagaagaggagcacccccaagacatgagggccgtgctccccccagagga
agagatggctttcctgggcccgaagactttggaccagaggagaattttgatgcttctgac
gaaacagcccgaggaagggatctcagaggtcgaggtcggggtaccccccgaggaggaagg
aagggtttgcttcccactcctgatgagttccctcgctttgaaggaggacggaaaccagac
tcctgggatggaaatagagagccagggccaggacatgaacatttccgtgatgctccccgc
cctgatcatccccctcacgacggtcattccccagctagcagagaacggtcctcttctctc
caaggcatggacatggcatctttaccaccccgaaagcgcccctggcatgatgggccggga
acctctgagcacagagaaatggatgccccaggaggtccttctgaggatcgaggaggcaaa
ggccgagggggcccaggaccttctcagagagtgcctaagtccggacgttccagctccttg
gatggagaccaccatgatggataccacagagatgaaccttttgggggccctccaggcagt
ggtaccccttctagagggggccggagtggcagtaactggggtagagggagtaacatgaac
tctggcccaccaaggcgaggagcttcgagggggggtgggaggggtcggtag
DBGET
integrated database retrieval system
