Bos indicus (zebu cattle): 109565383
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Entry
109565383 CDS
T04792
Symbol
VIPAS39
Name
(RefSeq) spermatogenesis-defective protein 39 homolog isoform X1
KO
K23287
VPS33B-interacting protein in polarity and apical restriction
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109565383 (VIPAS39)
Membrane trafficking [BR:
biu04131
]
Endosome - Lysosome transport
Others
Others
109565383 (VIPAS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
Motif
Other DBs
NCBI-GeneID:
109565383
NCBI-ProteinID:
XP_019824873
UniProt:
A0A6P5CHC1
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Position
10:complement(91188687..91215545)
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AA seq
492 aa
AA seq
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MNRTKGDEEEYWNSSKFKAFTFDDEDDELSQLKESKRAVNSLRDFVDDDDEDDLERVSWT
GEPVGSISWSIKETAGNSGSSHEREQLKNRNSFSTYAQLPKPASTYSLSSFFRGRTRPGS
FQSLSDALSDTPAKSYAPELGRPKGEYRDYSNDWSPSDTVRRLRKGKVCSLERFRSLQDK
IQLLEEAVSMHDGNVITAVLIFLKRTLSKEILFRELEVRQVALRHLIHFLKEIGDQKLLL
DLFRFLDRTEELALSHYREHLNIQDPEKRKEFLKTCIGLPFSAEDSAHIQDHYTLLERQI
IIEANDRHLELAGQTEVFRKHPRKASILNMPLVTTLFYSCFYHYTEAEGTFSSPVNLKKT
FKIPDKQYVLTALAARAKLRAWHDVDALFTTKNWLGYTKKRAPIGFHRVVEILHKNSAPV
QVLQEYVNLVEDVDTKLNLATKFKCHDVVIDTCRDLKDRQQLLAYRSKVDKGSAEEEKID
ALLNSSQIRWKN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggacaaagggtgatgaggaggagtattggaatagctccaagttcaaggctttc
acctttgatgacgaagatgatgagctctcacagttaaaggaatccaagcgggcagtgaat
agccttcgagactttgtggatgatgatgaygaagatgacctggagagagtcagctggacc
ggggaacctgtgggaagtatctcatggtccatcaaagagactgctggtaatagcgggtct
agccacgagcgtgaacagctgaagaaccgaaacagcttctccacctatgcacaactaccc
aaacctgcttctacctactctctgagcagcttttttagagggagaactagacctggaagt
ttccagtccctctctgatgctctgtcagacacacctgccaagagctatgctccagagctg
gggagacccaagggggagtatagggattacagcaaygactggagccccagtgacacagtg
cggcgcctcaggaagggcaaggtctgctcactggaaaggttccgctccttacaggacaaa
atccagctcctagaagaagcagtcagcatgcatgatgggaacgtcattactgcagttctg
atcttcctgaagaggacattgagtaaagagatcctcttccgagagctggaggtgcggcag
gttgccctgagacatctcattcacttccttaaggagataggtgatcagaagctgctttta
gacctctttaggttcctggatagaacagaagagcttgcgctgtcccattatcgagagcac
ttgaacattcaggaccccgagaaacgaaaagaatttcttaagacatgcattggcttgccc
ttttcagcagaagattctgcacacatacaagaccattacacactcctggaacgtcagatc
attatcgaggcaaacgatcggcatctagaattagcgggacagactgaggtcttccggaag
cacccccgcaaagcgtccattctcaacatgccgttggtgacgacgctcttctactcctgc
ttctaccactacacggaggctgaggggacgttcagcagcccggtcaacctgaagaagacg
tttaagatcccagacaaacagtacgtgctgacagcactggccgctcgcgccaagctccgg
gcctggcatgacgtcgatgccctgtttaccaccaagaactggctgggctacaccaagaag
agagcacccattggcttccatcgggttgtggaaattttgcacaagaatagtgcccctgtc
caggtattacaggagtatgtcaatctggtggaagatgtggacacaaagttgaacttagcc
accaagttcaagtgtcatgatgtcgtcattgatacttgccgggacctgaaggatcgtcag
cagttgctcgcatacaggagcaaggtggataaaggctctgccgaggaggagaagattgat
gcccttctcaacagctcgcaaattcgatggaagaattaa
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