Bos indicus (zebu cattle): 109565673 Help Entry 109565673         CDS       T04792                                  Symbol COL3A1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism biu  Bos indicus (zebu cattle) Pathway biu04611   Platelet activation biu04820   Cytoskeleton in muscle cells biu04926   Relaxin signaling pathway biu04933   AGE-RAGE signaling pathway in diabetic complications biu04974   Protein digestion and absorption biu05146   Amoebiasis biu05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:biu00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     109565673 (COL3A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     109565673 (COL3A1)   09152 Endocrine system    04926 Relaxin signaling pathway     109565673 (COL3A1)   09154 Digestive system    04974 Protein digestion and absorption     109565673 (COL3A1)  09160 Human Diseases   09174 Infectious disease: parasitic    05146 Amoebiasis     109565673 (COL3A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     109565673 (COL3A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     109565673 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:biu00536]     109565673 (COL3A1) Glycosaminoglycan binding proteins [BR:biu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109565673 (COL3A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  109565673 NCBI-ProteinID:  XP_019825139 UniProt:  A0A6P5CIH1 LinkDB All DBs Position 2:complement(7731494..7771186) Genome browser AA seq 1466 aa AA seqDB search MMSFVQKGTWLLFALLHPTVILAQQEAVDGGCSHLGQSYADRDVWKPEPCQICVCDSGSV LCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRN GDPGPPGSPGSPGSPGPPGICESCPTGGQNYSPQYEAYDVKSGXAGGGIAGYPGPAGPPG PPGPPGTSGHPGAPGAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGRPG ERGFPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGVPGENGAPGPMG PRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPG SSGAPGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGEMGPAGIPGAPGLIGARGPPGPPG TNGVPGQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIAGPKGEDGKDGSPGEPGANGLPG AAGERGVPGFRGPAGANGLPGEKGPPGDRGGPGPAGPRGVAGEPGRDGLPGGPGLRGIPG SPGGPGSDGKPGPPGSQGETGRPGPPGSPGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG GPGPQGPAGKNGETGPQGPPGPTGPSGDKGDTGPPGPQGLQGLPGTSGPPGENGKPGEPG PKGEAGAPGIPGGKGDSGAPGERGPPGAGGPPGPRGGAGPPGPEGGKGAAGPPGPPGSAG TPGLQGMPGERGGPGGPGPKGDKGEPGSSGVDGAPGKDGPRGPTGPIGPPGPAGQPGDKG ESGAPGVPGIAGPRGGPGERGEQGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPPG AAGPAGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGPPGPPGSNGNPGPPGSSGAPG KDGPPGPPGSNGAPGSPGISGPKGDSGPPGERGAPGPQGPPGAPGPLGIAGLTGARGLAG PPGMPGARGSPGPQGIKGENGKPGPSGQNGERGPPGPQGLPGLAGTAGEPGRDGNPGSDG LPGRDGAPGAKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPSGAPGPAG SRGPPGPQGPRGDKGETGERGAMGIKGHRGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRG PVGPSGPPGKDGASGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGAG GVAAIAGVGAEKAGGFAPYYGDEPIDFKINTDEIMTSLKSVNGQIESLISPDGSRKNPAR NCRDLKFCHPELQSGEYWVDPNQGCKLDAIKVYCNMETGETCISASPLTIPQKNWWTDSG AEKKHVWFGESMEGGFQFSYGNPELPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYMD HASGNVKKALKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWGKTVFQYQTRKAVRLP IVDIAPYDIGGPDQEFGADIGPVCFL NT seq 4401 nt NT seq  +upstreamnt  +downstreamnt atgatgagctttgtgcaaaaggggacctggttacttttcgctctgcttcatcccactgtt attttggcacaacaggaagctgttgacggaggatgctcccatctcggtcagtcttatgca gatagagatgtatggaaaccagaaccgtgccaaatatgcgtctgtgactcaggatccgtt ctctgtgatgacataatatgtgacgaccaagaattagactgccccaaccctgaaatcccg tttggagaatgttgtgcagtttgcccacagcctccaacagctcccactcgccctcctaat ggtcaaggacctcaaggccccaagggagatccaggtcctcctggtattcctgggcgaaat ggcgatcctggtcctccaggatcaccaggctccccaggttctcccggccctcctggaatc tgtgaatcatgtcctactggtggccagaactattctccccagtacgaagcatatgatgtc aagtctggartagcaggaggaggaatcgcaggctatcctgggccagctggtcctcctggc ccacccggaccccctggcacatctggccatcctggtgcccctggcgctccaggataccaa ggtccccccggtgaacctgggcaagctggtccggcaggtcctccaggacctcctggtgct ataggtccatctggccctgctggaaaagatggggaatcaggaagacccggacgacctgga gagcgaggatttcctggccctcctggtatgaaaggcccagctggtatgcctggattccct ggtatgaaaggacayagaggctttgatggacgaaatggagagaaaggcgaaactggtgct cctggattaaagggggaaaatggcgttccaggtgaaaatggagctccwggacccatgggt ccaagaggggctcccggtgagagaggacggccaggacttcctggagccgcaggggctcga ggtaatgatggagctcgaggaagtgatggacaaccgggcccccctggtcctcctggaact gcaggattccctggttcccctggtgctaagggtgaagttggacctgcaggatctcctggt tcaagtggcgcccctggacaaagaggagaacctggacctcagggacatgctggtgctcca ggtccccctgggcctcctgggagtaatggtagtcctggtggcaaaggtgaaatgggtcct gctggcattcctggggctcctgggctgataggagctcgtggtcctccagggccacctggc accaatggtgttcccgggcaacgaggtgctgcaggtgaacccggtaagaatggagccaaa ggagacccaggaccacgtggggaacgcggagaagctggttctccaggtatcgcaggacct aagggtgaagatggcaaagatggttctcctggagaacctggtgcaaatggacttcctgga gctgcaggagaaaggggtgtgcctggattccgaggacctgctggagcaaatggccttcca ggagaaaagggtcctcctggggaccgtggtggcccaggccctgcagggcccagaggtgtt gctggagagcccggcagagatggtctccctggaggtccaggattgaggggtattcctggt agccccggaggaccaggcagtgatgggaaaccagggcctcctggaagccaaggagagacg ggtcgacccggtcctccaggttcrcctggtccgcgaggccagcctggtgtcatgggcttc cctggtcccaaaggaaacgatggtgctcctggaaaaaatggagaacgaggtggccctgga ggtcctggccctcagggtcctgctggaaagaatggtgagaccggacctcagggtcctcca ggacctactggcccttctggtgacaaaggagacacaggaccccctggtccacaaggacta caaggcttgcctggaacgagtggtccyccaggagaaaacggaaaacctggtgaacctggt ccaaagggtgaggctggtgcacctggaattccaggaggcaagggtgattctggtgctccc ggtgaacgcggacctcctggagcaggagggccccctggacctagaggtggagctggcccc cctggtcccgaaggaggaaagggtgctgctggtccccctgggccacctggttctgctggt acacctggtctgcaaggaatgcctggagaaagagggggtcctggaggccctggtccaaag ggtgataagggtgagcctggcagctcaggtgtcgatggtgctccagggaaagatggtcca cggggtcccactggtcccattggtcctcctggcccagctggtcagcctggagataagggt gaaagtggtgcccctggagttccgggtatagctggtcctcgcggtggccctggtgagaga ggcgaacaggggcccccaggacctgctggcttccctggtgctcctggccagaacggtgag cctggtgctaaaggagaaagaggcgctcctggtgagaaaggtgaaggaggccctcccgga gccgcaggccccgccggaggttctgggcctgctggtcccccaggcccccaaggtgtcaaa ggcgaacgtggcagtcctggtggtcctggtgctgctggcttccccggtggtcgtggtcct cctggccctcctggcagtaatggtaacccaggccccccaggctccagtggtgctccaggc aaagatggtcccccaggtccacctggcagtaatggtgctcctggcagccccgggatctct ggaccaaagggtgattctggtccaccaggtgagaggggagcacctggcccccagggccct ccgggagctccaggcccactaggaattgcaggacttactggagcacgaggtcttgcaggc ccaccaggcatgccaggtgctaggggcagccccggcccacagggcatcaagggtgaaaat ggtaaaccaggacctagtggtcagaatggagaacgtggtcctcctggcccccagggtctt cctggtctggctggtacagctggtgagcctggaagagatggaaaccctggatcagatggt ctgccaggccgagatggagctccaggtgccaagggtgaccgtggtgaaaatggctctcct ggtgcccctggagctcctggtcacccaggccctcctggtcctgtcggtccagctggaaag agcggtgacagaggagaaactggccctgctggtccttctggggcccccggtcctgccgga tcaagaggtcctcctggtccccaaggcccacgcggtgacaaaggggaaaccggtgagcgt ggtgctatgggcatcaaaggacatcgcggattccctggcaacccaggggcccccggatct ccgggtcccgctggtcatcaaggtgcagttggcagtccaggccctgcaggccccagagga cctgttggacctagcgggccccctggcaaggacggagcaagtggacaccctggtcccatt ggaccaccggggccccgaggtaacagaggtgaaagaggatctgagggctccccaggccac ccaggacaaccaggccctcctggacctcctggtgcccctggtccatgttgtggtgctggt ggggttgctgccattgctggtgttggagccgaaaaagctggtggttttgccccatattat ggagatgaaccgatagatttcaaaatcaacaccgatgagattatgacctcactcaaatca gtcaatggacaaatagaaagcctcattagtcctgatggttcccgtaaaaaccctgcacgg aactgcagggacctgaaattctgccatcctgaactccagagtggagaatattgggttgat cctaaccaaggttgcaaattggatgctattaaagtctactgtaacatggaaactggggaa acgtgcataagtgccagtcctttgactatcccacagaagaactggtggacagattctggt gctgagaagaaacatgtttggtttggagaatccatggagggtggttttcagtttagctat ggcaatcctgaacttcccgaagacgtcctcgatgtccagctggcattcctccgacttctc tccagccgggcctctcagaacatcacatatcactgcaagaatagcattgcatacatggat catgccagtgggaatgtaaagaaagccttgaagctgatggggtcaaatgaaggtgaattc aaggctgaaggaaatagcaaattcacatacacagttctggaggatggttgcacaaaacac actggggaatggggcaaaacagtcttccagtatcaaacacgcaaggccgtcagactacct attgtagatattgcaccctatgatatcggtggtcctgatcaagaatttggtgcggacatt ggccctgtttgctttttataa

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