Bos indicus (zebu cattle): 109565853
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Entry
109565853 CDS
T04792
Symbol
NPAS2
Name
(RefSeq) neuronal PAS domain-containing protein 2 isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
109565853 (NPAS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109565853 (NPAS2)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109565853 (NPAS2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
Motif
Other DBs
NCBI-GeneID:
109565853
NCBI-ProteinID:
XP_019825364
UniProt:
A0A6P5CJD1
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Position
11:5983903..6107637
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AA seq
804 aa
AA seq
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MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN
EVSAQTEICDIQPDWKPSFLSNEEFTQLMLEALDGFIIAVTTDGSILYVSDSITPLLGHL
PSDVMDQNLLNFLPEQEHSEVYKMLSSHMLVTDAPSPEYLKSDNDLEFYCHLLRGSLNPK
EFPTYEYIKFVGNFRSYNNVPSPSCNGFDGALSRPCRVPLGKEVCFIATVRLATPQFLKE
MCIVDEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLELLARCH
QHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYAEVRVER
RQELALEDPLLENVHPSALKEKGSSLEPQQHFNALDMGTSGLNTSHSPSASSRSSHKSSR
TAMSEPTSTPSKLRAEASTPALPRSAQELPVPGLGQAAAMPAPLPAPASCDLTQQLLPQT
ILQSPPAPVSQFSAQLSMFQTIKDQLEQRTRILQANIRWQQEELHKIQEQLCLVQDSNVQ
MFLQQPDGSLSFSSAQRPETQQQLQQRSGPGPQLVASPQLPGQIASAQVTNQHLLRESSV
VSTQGPKPLRSSQMIQGSSLTPQFSSTTTALPLALSLTTPASASQEAPQGQPSPDFSHDR
QLRLLLSQPIQPMMPGSCDARQPSEVGRTGRQVKYPQSQAVFQNPDVHTTSSSAATPVLL
MGLQPRFPASQPSPLKPAQAQPQPPHFLQVQVPTSLHSEQQDSLLLSTYSQQPGSLVYPT
PGPARPARRVSSLSESSGLQQPPR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggatgagaaagacagagcaaagagagcttcccgaaacaagtctgagaagaag
cgtcgggaccagttcaatgtcctcatcaaagagctcagctccatgctgcctggcaacacg
cggaagatggacaagaccaccgtgctggagaaggtcattgggttcctgcagaaacacaat
gaagtctcagcgcaaactgaaatctgtgacattcagccrgactggaagccttcattcctc
agtaatgaagaattcacccagctgatgttggaggccttggatggcttcatcattgccgtg
acgacggatggcagcatcctctatgtttctgacagcatcacgcctctccttgggcactta
ccgtcggatgtcatggatcagaatttgttaaatttccttccagagcaagaacactcggaa
gtctataaaatgctctcttcccatatgcttgtgacggacgccccttccccagaatactta
aaatctgacaacgatttagagttttattgccatcttctcagaggcagcttgaacccaaag
gaatttccaacttatgaatacataaaatttgtaggaaattttcgctcttacaacaatgtg
cccagcccctcttgtaatggctttgatggcgccctttcaaggccctgccgagtgcccttg
gggaaggaagtctgcttcatcgccaccgttcgcctggccacaccacagttcttaaaggaa
atgtgcatcgttgacgaacctttagaggaattcacttcaaggcatagcttggaatggaaa
tttttatttctggatcacagagcccctcctatcatagggtacctgccttttgaagtcctg
ggaacctcrggctacgactactaccacgtggatgacctggagctcctagctaggtgccac
cagcacctgatgcagtttggcaaagggaagtcgtgctgctacaggtttctaaccaaaggc
cagcagtggatttggctccagacccactactacatcacctaccaccagtggaactccaag
cccgagttcatcgtgtgcacacactcggtggtcagttacgccgaggtccgggtggagagg
aggcaggaattggcgctggaggacccgctgctggagaacgtccacccttctgcactgaag
gagaagggctccagcctggaacctcagcagcactttaatgcacttgacatgggcacctca
ggccttaacaccagtcactcaccatcggcctcctcaagaagttcccacaaatcctcacgc
acagccatgtcagagcccacctccactccaagcaagctgagggcagaggccagcaccccg
gctttgcccagatcggcccaagagctcccagtgccaggactcggccaggcagccgcgatg
ccggcccccctgccagccccggcgtcctgtgacctcacacagcagctcctgcctcagacc
atcttgcagagcccacctgcccccgtgtcacagttttcagcacagctcagcatgttccag
accatcaaagaccagctggagcagcggacacgaatcctgcaagccaacatccggtggcag
caggaagaactccacaagatccaggagcagctctgcctggttcaggactccaacgtccag
atgtttctgcagcagccagatggatccctgagcttcagcagtgcccagcggccggagact
cagcagcagctccagcagaggtccggcccaggtccccagcttgtggccagcccgcagctt
ccagggcagatagcctctgcccaggtcacaaaccagcacctgctaagagaatcgagtgtg
gtatcgacccagggtccaaagccattgagaagctcacagatgattcaggggagcagcctg
acaccccagtttagcagcaccaccactgcgctcccgttggctctgagcctgaccacgcca
gcttccgcctcccaggaggccccccagggccaacccagcccggacttcagccatgaccgg
cagctcaggctactgctgagccagcccatccagcccatgatgcccggatcctgtgacgcg
aggcagccctcagaggtcgggaggactggacggcaagtcaagtatccacagagccaggcc
gtgtttcagaaccccgacgtgcacaccaccagcagcagcgccgccacccctgtcctgcta
atggggctgcagcccagattccccgcctcccagccgtcacccctgaagcctgcacaggcc
cagccgcagcctccgcactttcttcaggtgcaggtgccaacctctctgcacagtgagcag
caggactccctccttctctccacctactcgcaacagccagggtccctggtctacccgacg
ccggggcccgcgcgcccggcccgaagggtcagcagcctgtctgagtcctcaggcctccag
cagccgccccggtag
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