Bos indicus (zebu cattle): 109566080
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Entry
109566080 CDS
T04792
Symbol
RTN4
Name
(RefSeq) LOW QUALITY PROTEIN: reticulon-4
KO
K20720
reticulon-4
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
109566080 (RTN4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109566080 (RTN4)
03036 Chromosome and associated proteins [BR:
biu03036
]
109566080 (RTN4)
Membrane trafficking [BR:
biu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
109566080 (RTN4)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109566080 (RTN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
DUF639
Motif
Other DBs
NCBI-GeneID:
109566080
NCBI-ProteinID:
XP_019825711
UniProt:
A0A6P5CI57
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Position
11:complement(39292849..39367188)
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AA seq
1200 aa
AA seq
DB search
MEDMDQSPLVSSSSDSPPRPQPAFKYQFVKEPEDEEEEEEEEEDEDEDEDXEELEVLERK
PAAALSAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPSWDPSPVS
XSVPAPSPPSITADSPSKLFEDEEPPARPPPPPPADVSPEAEPSWTSVVPAPAAPPSTPA
APKRRGSSGSVDETLFALPAASEPVIHSSAEKVMDLKEQPGNTVSAGQEDFPSVLXETAA
SLPSLSPLSAASFKEREYLGDLPAVLPTEGTLPATSNEASKAFSEKAKNPFVERNLTEFS
ELEYSEMESSFSGSQKAEPAITVANPRDEIVVRSKDKEEDLVSLNILHTQQELSTVLTKS
VKEEDRVLSPEKTKDSFNEKGVAAEASMREEYADFKPFERVGEVKDTYKQDSDVLVAGGN
IESKLEGKVDKKRFSDSLEQTNREKDSESSNDDASFPSTPEAVRGGSGAYITCAPFNPTT
ENVSTNIFPLLEDHTSENKTDEKKIEEKKAQIVTEKNASVKTSNPFLMAAQESKTDYVTT
DHVSKVTEEVVANMPEGLTPDLVQEACESELNEATGTKIAFETKMDLVQTSEAVQESLYP
VTQLCPSFEESEATPSPVLPDIVMEAPLNSVVPSAGASAVQLSSSPLETPTSVNYESIKF
EPENPPPYEEAMNVSLKKESGMNEEITEPEGISVAVQETEAPYISIACDLIKETKISTEP
TPDFSSYSEIAEVAQPVPEHSELVEDSSPDSEPVDLFSDDSIPEVPQKQDEAVILVKENL
TEISSESVTGHDNKGKLSASPSPEGGKPYLESFQPSLGITKDTLAPDEVLALTQKEKIPL
QMEELNTAVYSSDGLFIAQEANLRESETFSDSSPIEIIDEFPTFVSSKADSSPTLAREYT
DLEVAHKSEIADIQDGAGSLACAGLPHDLSFKSIQPKEEVHIPDEFSKDRGDVSKVPVLP
PDVSALDAQAEIGSIEKPKVLVKEAERKLPSDTEKERRSPSAIFSAELSKTSVVDLLYWR
DIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHP
FRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVG
ALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRKAE
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatggaccagtcgcctctggtctcctcgtcctcggacagcccacctcggcct
cagcccgcattcaagtaccagttcgtgaaggagcccgaggacgaagaggaagaggaggag
gaggaggaagacgaggacgaggacgaagacstggaggagctggaggtgctagagaggaag
cccgccgccgcgctgtcggcggccccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnngcagccgtcttgggacccgagccccgtgtcg
tagtcggtgcccgcgccctccccaccctccattacagcagactcgccctccaagctcttt
gaagacgaggagcctccggcccggcctccccctcctccaccggccgacgtgagccctgag
gccgagccctcgtggacctcggttgtcccagcccccgccgcgcccccctccacgccggcc
gcacccaaacgcaggggctcctcgggctcagtggatgagacactttttgctcttcctgct
gcatctgagcctgtgatacactcctctgcagaaaaagttatggatttgaaggagcagcca
ggtaacactgtttctgctggtcaagaggattttccatctgtcctgcytgaaackgctgct
tctcttccttctttatctcctctctcagctgcttcttttaaagaacgtgaataccttggt
gatttaccagcagtactacccactgaaggaacacttccagcaacttcaaatgaagcttct
aaagcattctcagagaaggcaaaaaatccatttgtagagagaaatttaacagagttttca
gaattggaatattcagaaatggaatcatcattcagtggctctcaaaaggcagaacctgcc
ataacagtagcgaatcctagggatgaaatagttgtgaggagtaaagataaagaagaggac
ttagttagtcttaacatccttcatactcagcaggagttatctacagtccttacgaaatca
gttaaagaagaagatagagttctgtctccagaaaaaacaaaggacagttttaatgaaaag
ggagttgcagcagaagcttctatgagggaggaatatgcagacttcaaaccatttgagcga
gtaggggaagtgaaagatacttacaagcaagatagtgatgttttggttgctggaggtaat
atagagagcaaattggaaggtaaagtggataagaaacgtttttcagatagccttgaacaa
acaaatcgtgaaaaagatagtgaaagcagtaatgatgacgcttcatttcccagtacacca
gaagctgtaagaggtggttccggagcgtacatcacgtgtgctccctttaacccaacaact
gagaatgtttcaacaaacatttttcccttgttggaagatcatacttcggaaaataagaca
gatgaaaaaaagatagaagaaaaaaaggcacaaattgtaacagagaagaatgcaagtgtc
aaaacatcaaaccctttccttatggcagcacaggagtctaagacagattacgttacaaca
gatcatgtgtcaaaggtgaccgaggaagtagtggcaaacatgcctgaaggtctaacccca
gatttggttcaggaagcatgtgaaagtgaattgaatgaagctactggtacaaaaattgcc
tttgaaacaaaaatggacctggttcaaacttcagaagctgtgcaggagtcactttaccct
gtaacacagctttgcccatcttttgaagaatctgaagctactccgtcaccggttttgcct
gacattgtcatggaagcaccattaaattctgtagttcctagtgctggtgcttctgcagtg
cagctcagttcatcaccattagaaactcctacttcagttaattatgaaagcataaagttt
gagcctgaaaatcccccaccatatgaggaggccatgaatgtatcactaaaaaaagaatca
ggaatgaatgaagaaatcacagagcctgaaggtattagtgtagctgttcaggaaacagaa
gctccttatatatctattgcatgtgatttaattaaagaaacaaagatctctactgaaccg
actccagatttctctagttattcagaaatagcagaagttgcacagccagtgcccgagcat
tctgagctagttgaagattcctcccccgattctgaaccagttgacttatttagtgatgat
tcaatacccgaagttccacaaaaacaagatgaagctgtaatacttgtgaaagaaaacctc
actgaaatttcatctgagtcagtgacaggacatgacaataagggaaaactcagtgcttca
ccatcacctgagggaggaaaaccgtatttggagtcttttcagcccagtttaggcatcaca
aaagataccttagcacctgatgaagttttagcattgacccaaaaggagaaaatccctttg
cagatggaggagctcaatactgcagtttattcaagtgatggcttattcattgctcaggaa
gcaaacctaagagaaagtgaaacattttcagattcatctccgattgagattatagatgag
ttcccgacctttgtcagttctaaagcagattcttctcctacattagccagggaatacact
gacctagaagtagcccacaaaagtgaaattgctgacatccaggatggagctgggtcattg
gcttgtgcaggattgccccatgacctttctttcaagagtatacaacctaaagaggaagtt
catatcccagatgagttctccaaagataggggtgatgtttcaaaggtgcccgtactgcct
ccagatgtttctgctttggatgctcaagcagagataggcagcatagaaaaacccaaagtt
cttgtgaaagaagccgagagaaaacttccttctgatacagaaaaagagcgaagatctcca
tctgctatattttcagcagagctgagtaaaacttcagttgttgacctcctctactggaga
gacattaagaagactggagtggtgtttggtgccagcttgttcctgctgctctcgctgaca
gtattcagcattgtgagtgtaacggcctacattgccttggccctgctctctgtgactatc
agctttaggatatataagggtgtgatccaggctatccagaaatctgatgaaggccaccca
ttcagggcatatttggaatctgaagttgctatatctgaggagttggttcagaagtacagc
aattctgctcttggtcatgttaactgcacaataaaagaactcagacgcctcttcttagtt
gatgatttagttgattctctgaagtttgcagtgttgatgtgggtatttacctatgttggt
gccttgttcaatggtctgacactactaattttggctctgatttcactcttcagtgttcct
gttatttatgaacggcatcaggcgcaaatagatcattatctgggacttgcaaataagaat
gttaaagatgctatggctaaaatccaagcaaaaatccctggattgaagcgtaaagctgaa
tga
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