Bos indicus (zebu cattle): 109566431
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Entry
109566431 CDS
T04792
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109566431 (RC3H2)
04121 Ubiquitin system [BR:
biu04121
]
109566431 (RC3H2)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
109566431 (RC3H2)
Ubiquitin system [BR:
biu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109566431 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
109566431
NCBI-ProteinID:
XP_019826338
UniProt:
A0A6P5CLG7
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All DBs
Position
11:complement(97247061..97300574)
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AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAIRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENSVSQLIPRSTDSTLRALETVKKVGKVGTNGQNAAGPSVE
SVTENKIGSPPKTPVSNVAATSAGPTSAGTELNSVPPKSSPFITRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPVYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPE
QWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRTDFSENVSGTKFEDDHLSHYSPWS
CGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNLLSKEIELRNGESDYTEDAADTKPDRDIELELSALDTDEPDGQGEQIEEILDI
QLGISSQNDQLLNGTAVENGHPVQQHQEEPLEQKRQSLGEDRVILEEQKTILPVTSCFSQ
PLPVSISNASGLPITTSVSVGNLILKTHVMSEDKNDFLKSVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaacgtgcacaaacccatcagtttaggttgttcacacactgtttgtaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtgcttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagat
catcagtcagtaaagttaagtaatttaggtgagaacaaacactatgaggttgcaaagaaa
tgtgttgaagatttggcgctctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactagtgacacttgtaaactgt
cagctggtggaggaagaaggtcgtgtaagagccatacgcgcagcccgttcacttggagaa
aggactgtaacggagctaatattacagcaccagaaccctcagcagttgtctgccaaccta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaggaagaagct
ttgaagttggtgttactggcattagaagatggttctgctctctcaaggaaagttctggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttaccaaaagggatgaagac
tcttccctgatgcagctaaaggaggaattccgcagttatgaggctttacgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggactccgtatttcacctgagcaatgg
tcctcacttctgtatggtgacttggcgcataaatcacacatgcagtctatcattgataag
ctgcagtctcccgaatcctttgcaaagagtgttcaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaatagattgaggcctcacttagagcttcttgcaaatata
gaccctaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggcctagtagacttcatacaaaattatagtagaaaaggccat
gagacacctcagcctcagccaaacagcaaatacaagaccagcatgtgtcgagatttgcga
cagcaaggagggtgtccacgaggaacaaattgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacgtttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacggggaaaattgttccaagtacaaatggaatttcaaatgcagaa
aacagtgtttcccagctaattccacgtagtactgacagtacattaagagctctggagact
gtgaagaaagtggggaaggttggcaccaatggtcagaatgctgctgggccttctgtagag
tctgtaactgaaaataaaattggctctccacccaagactcctgtaagtaatgtagcggct
acctcagctgggcccactagtgctggaacagagctgaattctgtgcctccaaaatccagc
ccatttatcactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccaaggactcagataccctttgaagtcccacagtacccacagactggatactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagagtcctccctcccacctgcttccatgccatatgccgatcattacagtaca
ttttcccctcgagatcgaatgaattcttctccttaccaacctcctcctccgcagccgtat
ggaccagttcccccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgcccacctgtgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcgtcagtgtatcagacgtctttgcgggaaagatataactcattagat
gggtattattcagtggcttgtcagccaccaagtgagccaaggacaactgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggca
acacagtcaccaacaccaccttctcctctattcagtgtagactttcgcactgatttctct
gaaaatgtgagtggcacaaaatttgaagatgatcatctttcccattattctccctggtct
tgtggcaccatcggttcttgtataaatgccattgattcagagcccagagatgtgattgct
aattcaaatgcggtattaatggacctggacagtggggatgttaagagaagagtgcattta
tttgaaactcagagaaggacaaaagaagaagatccaataattccttttagtgatggaccc
atcatctcaaaatggggtgcgatttctagatcttcccgtactggttaccataccacggac
cctgtccaggccactgcttcccaaggaagtgcaaccaagcccatcagtgtatcagattat
gtaccttatgtcaatgctgttgattcaaggtggagttcatatggtaatgaggctacatca
tcagcacattatattgaacgcgacagattcattgttaccgatttatctggtcatagaaag
cattccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactcattg
cttcttcagagggaggccaatgctctggctatgcaacagaagtggaattccctggatgaa
ggccgtcacctcacattaaatcttctaagtaaggaaattgaactgagaaatggagagagt
gattatacagaagatgcagctgatactaagcctgatagggatattgagttagagctgtca
gcacttgatactgatgaacctgatggacaaggtgaacagattgaagagatcctggacata
cagcttggtatcagttctcaaaatgatcagttgctgaatggaacagcagtagagaatggg
catccagtccagcagcaccaagaggagcctctggagcagaagagacagagtttaggtgaa
gaccgtgtgattctggaagagcaaaaaacaattctgccggtaacttcttgctttagccag
ccactcccagtgtccatcagcaatgcgagtggcctacccatcaccacatctgtcagtgtt
ggcaacctcattctgaaaactcatgttatgtctgaagataaaaacgactttttaaaatcc
gttgcaaatgggaagatggttaatagctga
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