Bos indicus (zebu cattle): 109566883
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Entry
109566883 CDS
T04792
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109566883 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
biu04121
]
109566883 (LMO7)
Ubiquitin system [BR:
biu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
109566883 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
109566883
NCBI-ProteinID:
XP_019827125
UniProt:
A0A6P5CN70
LinkDB
All DBs
Position
12:51148848..51368886
Genome browser
AA seq
1795 aa
AA seq
DB search
MEEAEADCALAFAEAQRWVEAVTEKNFETKDFRASLENGVLLCDLINKLKPGVIKKINRL
STPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVKQEETDRRVKNVLITLYW
LGRKAQSNPYYNGPYLNLKAFENLLGQALTKALEESSCLKRSGRDSGCSDIWGPERGELL
ASPGSCKREDSFESLDSLGSRSFTSCSSDITLRGAREGCESDTDSEFTFKMQDHNKDDMS
YRRISAIEPKSALPFNRFLPNKSRQPSYVPAPLRKKKLDKNEDNRRSWASAVYTEADGAF
PRAERDISNPASYPKEVYGSESGSDSEEERRLPDVVWDDLANRRFQVKKRPESFISPKSC
SPXFSPPDPLTTGLYKLTSNERRTWGTNVENWPTVQETSDSSCYLEENESKKSVPNTVKD
DLYVRKLSPVMPSPGNAFDQFLPKCWIPEDVNWKRIKRETYKPWYKEFQGFRRNSDSDDE
DSGSDRSATIFSRIQNADHRLDSNCQRRSLLLELATKXARNSWDPHAARRTHGVSDEPSQ
FLLLQALQTYSDDILSSETNIKIDPTAGPRLITRRRNLSYAPGCAPGDALEMPVLDPDLE
NDDFFVRKTRAFHANPCVLRAFEDLRSLSGQDDPVERDIILQCREGELVFXDLEKDDMIV
RRIPAQKTEVPLSGGPDRYQPVPLPEPWMLPPEIQAKFLCVLERTCPSKEKSTSCRVLVP
SCRQKKDDMLARKIQSWKLGTAVPPVSFTPGPCSEADLQKWESIREASRLRHRKRLMVER
LFQKIYGENGSKSLSDVSAEDIQSLRQLRYEEMQRIKSQLKEQDQKWQDDLAKWKDRRKS
YTSDLQKKKEEREEIEKQALEKSERRSKTFNEMLQDRESQNQMSTVTSRRRLYSFDDGLN
EEKRPPVPPMPETYSQSERVEEKGTTYPTEIPKQDSTTFAKREXTVTAEVQFPSRSPVEE
QRPASLSSQHSLNTQMESTRVSATLPRSYQKTDAARLTSVVTPRPFGSQSRGISSLPRSY
TMDDAWKYNGDIEGVKRTQSSSISISVQRPDTRQLASGSSSEREAEAPRESVMRLPSPTS
PXSSLSQDQAATSKDTLSSISSPDLTSELGEGRSSPQAEVPRSQDQFSDMRISINQTPGS
RLDFGFTVKWAFSRIFVASVEAGSPAEFSQLQVDDEIIAINNTRFSYKDTKEWEETMAKA
QETGSLVMDIRRYGKSDWGKDQASLPFTRHKTLNLTSMATKIIGSPETKWIDATSGIYSS
DKASNLSVTTDFSESLQSSNTESKEINGICDESSTFESKASEPISLKNLKRRSQFFEQGS
SGFSYSSWVYLCGSSDSVVPDLPVPTISAPSRWAWDPEEERKRQERWQKEQDRLLQEKYQ
REQEKLREEWQRAKQEAERENSKYLNEELMVLNSNSISLTAREPALATRGEESKSPDKEG
TRAEEKMRHQQQEEDANEDQRKKLQEQLTLERERKLKEQQYQEEQQQKRREVEEQKHQAE
KERETSIKIYQYRRPIDSYDIPKREEESSGLLPSDRNKSRSTTELDDFPTNKNGSNRYAD
RSGNSSSSQKSSKKEPAPSGAELERQQILQEMRKRTSLYDDNSWIRQRSSSVNKEPICLP
GIMRRGESLDNLDSPRTNSWRQSPWLSQPSGVYASSSVQDFSRPPPQLLSTSNRAYMRNP
SSSVPPPSAGSVKTTTPSPIPRSHSPAAPQPGSQPRNRSVSGKRVCSCCHNILGKGAAMI
IESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNNQLYCNDCYLRFKSGRPTAM
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcggaggccgattgcgccctggcgttcgccgaggcccagcgatgggtggag
gcagtaacagagaagaatttcgagacaaaggattttcgagcctctctagagaatggtgtt
ctgttgtgtgatttaattaataaactgaaacctggggtcattaagaagatcaayagattg
tccacacctatagcaggcttggataatataaacgtttttttgaaagcgtgtgaacagatt
ggattgaaagaagcccagcttttccatcctggggatctacaggatttatcaaatcgagtc
actgtcaagcaagaagagactgataggagagtgaaaaatgttttgataactttgtactgg
ctgggaagaaaagcacaaagtaacccctactataatggtccctatcttaatttgaaagcg
tttgagaatcttttaggacaagctctgactaaggcacttgaagagtccagctgcctgaag
aggagtggcagggacagtggttgcagygacatctggggccctgagcgcggggagcttctg
gcttctccaggcagctgtaagagggaggactcgtttgagagcttggactctttgggatca
agatcattcacaagctgctcctctgatatcacgttgaggggggcacgtgaaggttgtgaa
agtgacacagattctgaatttacattcaaaatgcaggaccataataaagatgacatgtct
tatagaaggatttcggctattgaacccaagtctgccttacccttcaatcgctttttaccc
aacaagagtagacagccatcgtacgtgccggcacccttgaggaagaaaaagctggacaaa
aatgaggataacagacgaagctgggcaagtgccgtctacacagaagcagatggagcattt
ccaagagcagagcgcgatatttcgaatccagcttcctatccgaaggaggtgtatggttct
gaaagtggatcggactcggaggaggaacggaggctgccggatgtagtttgggatgactta
gccaaccgtagattccaagtgaaaaagaggcctgagagtttcatctctcctaaatcttgt
tcacccaycttttctcctcctgacccattaaccactgggctgtacaaactgacgagtaac
gagaggagaacttggggcacgaacgtggagaactggccaacagtacaagaaacttcagat
tcctcttgttatttggaagagaacgaaagcaagaaaagcgttcccaacactgtaaaggat
gatctttacgtgcgaaagctaagcccagtcatgccaagcccagggaatgcttttgatcag
tttcttcccaaatgctggatcccagaggatgtgaactggaaacgaataaaaagggaaact
tacaaaccgtggtataaagaatttcagggattcagaaggaattcagactctgacgatgag
gactcaggctctgacagaagtgccaccatttttagtagaatacaaaatgcagatcatagg
ctagacagcaactgtcaaagacgttcactcctgctggaactggctaccaaacrggccaga
aactcctgggacccccatgcagccaggagaacccatggtgtttcagatgagcccagtcag
tttttattacttcaggccctccagacatattctgatgacatcttgtcttctgaaacaaat
atcaaaatcgaccccacggctggcccccggctcataacacgcagaaggaacctctcttat
gctcctgggtgtgcaccgggagatgccctggagatgccagtcctggatcctgacttagag
aatgacgacttctttgtcagaaagactagggctttccatgcaaacccatgtgttctccgg
gctttcgaagacttaagaagtctgtctgggcaagatgatcctgtagagcgagatataatc
ctgcagtgtagggaaggggaacttgtctttcyggacctcgaaaaagatgatatgattgtt
cgccgcattccagcacagaagacggaggtgcctctgtcaggaggccctgatagatatcag
ccagtcccattgcccgaaccctggatgcttcctccagaaattcaagcaaaatttctctgt
gtgcttgaaaggacatgcccctcgaaagaaaaaagtactagctgtagagtgttagttcct
tcctgtaggcagaagaaagacgacatgttggctcgtaagatccagtcttggaagctggga
accgcggtccctcccgtcagtttcacccctggtccctgcagcgaggcggacttacagaag
tgggagtccatccgagaggccagcaggcttaggcacaggaagcggctgatggtggagaga
ctctttcaaaagatttatggtgagaacgggagtaagtccttgagtgatgtcagcgcagag
gatattcagagcttgcgtcagctacgttacgaggagatgcagagaatcaagtcccagtta
aaagagcaggaccagaaatggcaggatgaccttgcaaaatggaaagatcgtcggaaaagc
tacacttcggatctgcagaagaaaaaggaggagagggaggagattgagaagcaagctctt
gagaagtcggagagaagatctaagacgtttaacgaaatgctgcaggacagggaatcccaa
aatcagatgtctacagttacgtcgagaaggaggctgtattcttttgatgayggattgaat
gaagaaaagcgtccccctgtgccgcctatgccagaaacctattcccagagtgagagagta
gaagagaaaggaacaacttatccgacagaaattcctaagcaggattctacaacttttgcg
aaaagggagrctactgtcacagctgaagtccagtttccttctagaagccccgtggaagaa
cagcgcccagcctccttgtcgtctcagcattcgctgaatacacaaatggagtcgactcga
gtttcagcaactctccccagaagttaccagaaaaccgatgcggccaggttaacctctgtg
gtcacaccgagaccctttggctctcagtcaaggggaatctcatctctcccgagatcctac
acgatggatgatgcttggaagtataatggagacatagaaggcgtgaagagaacccagagc
agttcgatcagcatctctgtgcaaagacctgacacacgccagcttgcgtccggctcatcc
agcgaaagagaggccgaagcacccagagaaagtgtgatgcggttgccctctcctacatcc
ccctrctcatctctttcccaggatcaggctgccacttctaaagacacattgtcttcaata
tctagccctgatttaacatctgagcttggagaagggagaagctcgccacaggcagaggtc
cccaggtcacaggatcagttcagtgatatgagaatcagcataaaccagacgcctgggagc
cgtcttgactttgggtttacagtaaaatgggctttttccaggatcttcgtagcatcagtt
gaagcaggtagcccagccgaattttctcagctacaggtagatgatgaaattattgctatc
aacaacaccaggttttcatataaggacacaaaagagtgggaggaaaccatggctaaggcc
caggaaactgggagcctagttatggatatcaggcgctatggaaagtctgattggggcaaa
gaccaggcttccctgccatttacacggcataaaaccctcaatctcaccagtatggctacc
aaaattataggttcacctgaaacaaagtggattgatgccacttccggaatttacagctca
gacaaagcttcaaatctgtcagtaacaaccgatttctcagaaagccttcagagttctaat
actgaatcaaaagaaatcaatggaatttgtgatgaaagcagtacttttgaatcaaaagcc
tctgaacctatttctttgaaaaacttaaaaaggcgatcacagttttttgaacaagggtca
tcaggcttttcttacagttcatgggtctacctctgtggaagctccgattctgtggttccg
gatcttccagtcccaaccatcagtgccccaagtcgctgggcctgggatccagaggaggaa
cggaagcggcaggagagatggcagaaggagcaagaccgactgctgcaggaaaaatatcaa
cgagaacaggaaaaactgagggaagagtggcagagggctaagcaggaggctgagagagag
aattccaagtacttgaatgaggaactgatggtcctgaactcaaacagcatttctctgacg
gcccgggagcctgccctggccaccaggggtgaggagtccaagtctcctgacaaagaagga
acccgggcagaggaaaagatgaggcaccagcagcaggaggaagatgcgaatgaggaccaa
aggaagaagctgcaggaacaactcactcttgagagagagaggaagttgaaggagcagcag
tatcaggaagagcagcaacagaagcggcgtgaagtggaagagcagaagcaccaggcagag
aaagagagggaaacttccatcaaaatataccagtacagaaggcctattgattcctatgac
ataccaaagagagaagaagaatcttcagggttgcttcctagtgacaggaataaatccaga
tctactactgaattggacgatttccccacaaataaaaatggaagcaatagatatgcagac
cgaagtgggaacagtagctcatcacagaagagctcgaagaaggaaccagcgccatcagga
gcggagttggagagacagcaaatcctccaagaaatgaggaagagaacttctctttatgat
gacaacagctggatccgacagcgcagttccagtgtcaacaaagagcctatttgtctgcct
gggattatgagaagaggtgaatctctagataacctggattccccaagaaccaattcttgg
cgacagtccccgtggctcagtcagccgtcaggagtctatgcctcttcctccgtccaagac
ttcagtcgccccccacctcagctgttgtccacatcaaaccgtgcctacatgcggaacccc
tcctccagcgtcccccctccctcagctggttctgtgaagaccaccaccccgtcccccata
ccrcgtagccattcccccgcggctccgcagccaggctcccagccacgcaacaggtcggtc
agtgggaagcgcgtgtgctcctgctgtcataacattctgggcaaaggagccgccatgatc
atcgagtccctgggtctttgttatcatttgcattgttttaagtgtgtggcctgcgagtgt
gacctcggaggctcttcctcaggagccgaagtcagaatccgaaacaaccaactgtactgc
aacgactgctatctcagattcaaatctggacggccaaccgccatgtga
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integrated database retrieval system
