Bos indicus (zebu cattle): 109566959 Help Entry 109566959         CDS       T04792                                  Symbol COL4A1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism biu  Bos indicus (zebu cattle) Pathway biu04151   PI3K-Akt signaling pathway biu04510   Focal adhesion biu04512   ECM-receptor interaction biu04820   Cytoskeleton in muscle cells biu04926   Relaxin signaling pathway biu04933   AGE-RAGE signaling pathway in diabetic complications biu04974   Protein digestion and absorption biu05146   Amoebiasis biu05165   Human papillomavirus infection biu05200   Pathways in cancer biu05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:biu00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     109566959 (COL4A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109566959 (COL4A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     109566959 (COL4A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     109566959 (COL4A1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     109566959 (COL4A1)   09154 Digestive system    04974 Protein digestion and absorption     109566959 (COL4A1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     109566959 (COL4A1)   09162 Cancer: specific types    05222 Small cell lung cancer     109566959 (COL4A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     109566959 (COL4A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     109566959 (COL4A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     109566959 (COL4A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:biu04147]     109566959 (COL4A1)    00536 Glycosaminoglycan binding proteins [BR:biu00536]     109566959 (COL4A1) Exosome [BR:biu04147]  Exosomal proteins   Exosomal proteins of other cancer cells    109566959 (COL4A1) Glycosaminoglycan binding proteins [BR:biu00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109566959 (COL4A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  109566959 NCBI-ProteinID:  XP_019827264 UniProt:  A0A6P5CPT9 LinkDB All DBs Position 12:complement(83035680..83113159) Genome browser AA seq 1665 aa AA seqDB search MPKAFQLKPGPPVLLFKAVFSSFQGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVIGFPG MQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPSGVPGYPGNPGLPGIPGQDGPPGPPGIPG CNGTKGERGPVGPPGLPGFAGNPGPPGLPGMKGDPGEILGHIPGTLLKGERGYPGQPGAP GSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGEKGDQGVSGPPGLPG QAQVITKGDTAMRGEKGQKGEPGFPGLPGFGEKGEPGKPGPRGKPGKDGEKGEKGSPGFP GDSGYPGQPGQDGLKGEKGEAGPPGLPGTVIGTGPLGEKGEPGYPGGPGAKGETGPKGFP GIPGQPGPPGFPTPGLIGAPGFPGDRGEKGEPGLPGVSLPGPSGRDGLPGPPGPPGPPGQ PGHTNGIVECQPGPPGDQGPPGIPGQPGLTGEVGEKGQKGDSCLVCDTAELRGPPGPQGP PGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGAPGLMGQPGAKGEPGEIYFDIRLKGDKG DPGFPGQPGMPGRAGSPGRDGQPGLPGPRGSPGSVGLKGERGPPGGVGFPGSRGDIGPPG PPGFGPIGPIGDKGQIGFPGTPGAPGQPGPKGEAGKVVPLPGPPGAEGLPGSPGFQGPQG DRGFPGSPGRPGLPGEKGAIGQPGIGFPGPPGPKGVDGLPGDAGPPGNPGRQGFNGLPGN PGPPGQKGEPGVGLPGLKGLPGIPGIPGTPGEKGNXGGPGIPGEXGAIGPPGLQGLRGDP GPPGFQGPKGAPGVPGIGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPGPKGD KGSQGLPGLTGQSGLPGLPGQQGTPGQPGIPGPKGEMGVMGTPGQPGSPGPAGVPGLPGA KGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGEKGDQGEKGQTGPTGD KGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGVSGIPGAPGLPGPKGSXGGMGLPGMPGP KGVAGIPGPQGIPGLPGDKGAKGEKGQAGLPGIGIPGRPGDKGDQGLAGFPGSPGEKGEK GSTGIPGMPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGIKGEAGLPGKPGPT GPAGQKGEPGSDGIPGSVGEKGESGLPGRGFPGFPGSKGDKGSKGDVGFPGLAGSPGIPG SKGEQGFMGPPGPQGQPGLPGTPGHAVEGPKGDRGPQGQPGLPGRPGPMGPPGLPGLEGL KGERGNPGWPGTPGAPGPKGDPGFQGMPGIGGSPGITGAKGDVGPPGVPGFHGQKGAPGL QGVKGDQGDQGFPGTKGLPGPPGPPGPFSIIKGEPGLPGPEGPAGLKGLQGPPGPKGQQG VTGSVGLPGPPGEPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTPSVDH GFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMPFLF CNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGENIRPFISRCAVCEAPAMVMAVHSQT IQIPQCPTGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNY YANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 4998 nt NT seq  +upstreamnt  +downstreamnt atgccaaaagcatttcagttgaaacctggacctcctgttcttctgtttaaagctgttttc tcttccttccagggtgggtgtgccggctctggctgcgggaartgtgactgccatggcgtg aagggacaaaagggagaaagaggcctcccggggttacaaggggtcatcgggtttcccgga atgcaaggacccgaggggccacagggaccaccgggacagaagggtgacaccggcgagccc ggactgccaggcactaaaggcacaagaggaccctcaggagtgcctggttaccctggaaac ccaggacttcctggtattcctggccaggatggtcctccgggtcccccaggtattccagga tgcaacgggacaaagggtgagagagggcctgtggggcctcccggtttgcctggattcgcc ggaaatcccggaccaccagggttaccgggaatgaagggagatccaggtgagattctgggc catataccagggaccctgctgaaaggcgaaagaggatatcctggacagccaggagcgccc ggctcaccaggtctgccgggactgcaaggccccgtcggccccccaggattcactggacca ccaggccctccaggccctcctggccctccaggtgaaaaggggcagatgggcttgagctty caaggacccaaaggtgaaaagggtgatcaaggggtcagygggcccccaggattgccagga caggcgcaagtcatcacgaaaggagacacggccatgcgaggcgagaagggtcaaaaaggt gaacctggatttccggggctgccagggtttggagagaaaggagaacctggaaaaccaggg ccccgtggaaaaccaggaaaagatggtgaaaaaggagaaaaagggagtccagggtttcca ggcgactcagggtacccaggacagcccggccaagacggtttaaagggagagaaaggtgaa gcaggtcctcccgggcttcccggaactgttattggcacgggaccgttgggagagaaagga gagcccgggtacccagggggtccgggggcgaaaggggagacaggtcccaaaggtttccca ggaataccaggccagccaggccctccaggtttcccgactccggggctgattggtgccccc ggcttccctggcgacagaggagagaagggtgaaccgggcttgccgggygtgtcgctgcca ggacccagtggaagggacgggcttcccggcccccctggcccccccgggccccctgggcag ccgggccacacaaatggaatcgtggaatgccagcctgggccgccaggggaccagggtcct cccggaattccagggcagccggggttgacgggcgaagttggagaaaaaggtcaaaaagga gacagttgcctcgtctgtgacacagcagagcttcgtgggcccccagggccacagggaccc cccggagaaataggtttcccaggacagccaggagccaagggtgacagaggcttgcccggc agggacggtctggaaggactgcccggtccgcaaggtgcgccggggctcatgggccagccg ggagccaarggcgagcccggtgagatctacttcgacatacggctcaaaggcgacaaagga gaccccggcttcccaggccagcccggcatgccaggcagagcgggctcccccggaagagac ggccaaccgggtctgcccggccccagaggctccccgggttccgtaggattgaaaggggag cgtggccccccgggaggcgtcggattccccgggagccgtggcgacatcggccctccgggg cctccaggctttggcccgattggccccattggtgacaaaggacagataggcttcccagga acccccggggccccaggccagccaggtcccaagggcgaggcggggaaagtcgtgcccttg cccggcccccctggagcagaaggacttcccgggtcccccggcttccaggggccacaaggt gaccgaggttttcctggaagccccggaaggccgggcctccctggagagaagggcgccatc ggccagcctgggattggatttcctgggcctcccggccccaaaggcgttgatggtttacct ggagacgctggacctcctgggaatccgggtcgtcaaggcttcaacggcttacctggcaac cccggtccacctggacagaagggcgagcctggagttggtctgccgggactcaaaggcctg cccgggatacctggcatccccggcacccccggggagaagggaaacrtcggaggaccggga attcctggagagcrcggcgccatcggccccccaggcctccaggggctcagaggtgaccca ggaccacctggatttcaaggccccaaaggagctccgggagtccccggaatcggcccccct ggagcaatgggcccccccggaggacagggacccccagggtcatcaggcccccccggagtg aaaggagagaaaggcttccctggcttcccaggcctggacatgccrggccccaaaggagac aaagggtcccaggggctcccyggcctgacggggcagtctgggctgcctggccttcctgga cagcagggcacccccggccagcctggcattccaggtcccaagggagagatgggagtcatg gggactccrgggcagcccggctcgccagggccagcgggcgtgccaggattgccaggtgcc aaaggggaccacggcttccccggctcttcgggacccaggggagaccctggcttcaagggc gacaaaggcgacgtggggctccccggcaagccrggctccatggacaaggtggacatgggc agcatgaagggygagaagggagaccaaggcgagaaaggacaaactggtccgactggtgat aaaggatcccggggagacccgggaaccccaggtgtgccgggaaaggatggtcaggcagga caccccgggcagccaggacctaaaggtgatccaggtgtgagcgggatcccaggtgctccg ggacttcctggtcccaaaggatccrctggtggaatgggcctaccaggaatgccaggacca aaaggtgtggctggcatccccggcccgcagggcattcctggcttacctggagacaagggg gcaaaaggagagaaagggcaggcggggctgcctggcattgggattccaggacggcccggg gacaagggagaccagggcttagcaggatttcccggaagccccggcgagaagggagagaaa ggaagcactgggatcccagggatgcccgggtccccgggccccaaaggctccccaggaagt gttggctatccgggaagccctgggttgccyggagagaaaggtgacaaaggcctcccggga ctggatggcattcctggcatcaaaggagaagcaggtcttcctgggaagcctggccccacg ggtccagccggccagaaaggggagcccggcagcgatggaatcccagggtcggtgggagag aagggcgagtcaggtctacctggaagaggattcccagggtttccagggagcaaaggagac aaaggttcaaagggcgatgtgggcttcccaggattagccgggagcccaggaattcctgga tccaaaggagaacaaggattcatgggtcccccgggaccacagggacagccgggattgcca gggaccccaggccacgcggtagaggggcccaaaggagaccgcggcccgcaaggacaaccc ggcctgccagggcgtccggggcccatggggcctccaggcctccccgggctcgaggggctg aaaggtgaaagggggaacccaggctggccgggcactccgggagctccagggcccaaggga gacccaggattccagggcatgccgggcatcggcggctctccagggatcacaggagccaag ggtgatgtgggacctccaggagttccagggtttcacggtcagaaaggcgcccccggcctg cagggagtcaaaggtgaccaaggagatcaaggcttcccaggaactaaaggtcttcccggc cccccgggccccccaggtccrttcagcatcatcaagggggaaccagggctccctgggccc gagggccccgcgggtctgaaagggcttcagggacctccaggcccgaaaggacagcaaggt gtgacgggatccgtgggcttgcccgggcccccaggtgagcccggctttgacggcgcccca ggccagaaaggagagacggggcccttcggccctcccggtccacgtggcttcccaggtccg cccggccccgacgggctgccgggatccatgggtcccccgggcaccccatcagtcgatcac ggcttccttgtgacccggcacagtcagacaacagacgacccccagtgccctcctgggacc aaaatcctctaccacggctactctttgctctacgtgcaaggcaacgagcgggcgcacggc caggacttgggcacggcgggcagctgtctgcggaagttcagtaccatgcccttcctcttc tgtaacatcaacaatgtctgcaacttcgcgtcccgcaacgactactcctactggctgtcc accccggagcccatgcccatgtccatggctcccatcacgggggagaacatccggcccttc atcagcaggtgtgctgtgtgtgaggctccggccatggtgatggccgtgcacagccagacc atccagatcccgcagtgccccaccggctggtcctcgctctggatcggctactcctttgtg atgcacaccagcgccggggctgaaggctctggccaagccctcgcctcccccggctcgtgt ctggaggagttcagaagcgcccccttcatcgagtgccacggccgcggaacttgcaattac tacgcgaacgcttacagcttttggcttgccacgatagagcggagcgagatgttcaagaag cccacgccgtccacgctgaaggccggggagctgcgcacgcatgtcagccggtgccaggtg tgcatgcggaggacataa

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