Bos indicus (zebu cattle): 109567814
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Entry
109567814 CDS
T04792
Symbol
VSX1
Name
(RefSeq) LOW QUALITY PROTEIN: visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109567814 (VSX1)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
109567814 (VSX1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109567814
NCBI-ProteinID:
XP_019828389
UniProt:
A0A6P5CT16
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Position
13:complement(42868362..42876296)
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AA seq
365 aa
AA seq
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MTGRDALSDGRARSRAVVXXXXXXXXXXXXXAITDLLGLEAELPAPEGPGPGSXCEGPAA
APLAGPGLGGSCPARGALPLGLGLLCGFGAQPPAAARAPCLLLADVPFLPPEGPEPLAPR
FPGRPPPSAARQKRSESVSTSDEDSPSEDRSDRKASPAPSKRKKRRHRTVFTAHQLEELE
KAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGA
MVRHCIPLPDSVLGSGEGGLLGSCAPWLLGMHKKSAGTIRKAESEEKLAGLWGSDHLKEG
SSPHQAGPQRGLEEGSPVSGVEDVVIDLSSSTRQETDRAQQGVGDQGRPDSEGLEGLQPG
KEGAL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcagagacgcgctttccgacgggcgtgccagaagcagggctgtggtnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcgccatcaccgacctgctgggcctggag
gccgagctgcccgcacctgagggccccgggccgggatctnggtgcgaaggcccggcagcc
gcgccccttgcgggcccaggactcggaggctcctgcccggcacgcggagcccttccgttg
ggcctcggcctcctctgcggtttcggcgcgcagccccctgcggctgcccgggcaccctgc
ctgctcctcgccgacgtgcccttcctgccgcccgaggggcctgagcccctcgccccgcgc
ttccccggccgcccaccgccctcggccgcccgccagaaacgtagcgagagcgtgtcgacg
tccgatgaagacagcccttctgaagacaggagtgaccggaaggcgtccccagcccccagc
aaaaggaaaaagaggaggcacaggaccgttttcactgcccaccaactggaagagctggag
aaggccttcagtgaggcccactaccctgatgtgtatgcccgggaaatgctggccgtgaag
actgaactccccgaagaccgaatacaggtctggtttcaaaaccggcgggccaagtggcgg
aagcgagagaagcgctggggcggcagcagcgtgatggccgaatatgggctctacggggcg
atggtgcgccactgcatcccgctgcctgactccgtcctgggctctggggagggcggcctg
ctgggctcctgcgcaccctggctcctggggatgcataaaaaatctgcagggacaataagg
aaagcagaaagtgaagaaaagctggcaggactctggggctctgaccacctcaaggaaggt
tctagcccccatcaggcgggaccccagaggggcttggaggaaggcagtcctgtgagcggt
gtggaagacgtggtcattgatctctccagctccacacgccaggagactgatagagcacag
cagggggtcggggaccaaggacgtccagactctgaggggctagaggggctccaacctggg
aaggagggggccttatga
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