KEGG   Bos indicus (zebu cattle): 109569202
Entry
109569202         CDS       T04792                                 
Symbol
USH1C
Name
(RefSeq) harmonin
  KO
K21877  harmonin
Organism
biu  Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:biu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:biu03037]
    109569202 (USH1C)
Cilium and associated proteins [BR:biu03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   109569202 (USH1C)
SSDB
Motif
Pfam: USH1C_N PDZ PDZ_6 PDZ_2 Baculo_LEF5_C
Other DBs
NCBI-GeneID: 109569202
NCBI-ProteinID: XP_019830073
UniProt: A0A6P5CWP3
LinkDB
Position
15:33778422..33825488
AA seq 863 aa
MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVGDLKLVINEPSRLPLFD
AIRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKD
GQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLIPVKSSPDEPL
KWQYVDQFVSESGGGRSSLGSPGSQENKEKKVFISLVGSRGLGCSISSGPIQKPGIFISH
VKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEAVNVLKSSRSLTISIVAGAGRELFMTD
RERLAEVRQRELQRQELLMQKRLAMESNKILQEQQEMERQRKKEIAQKAAEENERYRKEM
EQIVEEEEKFRKQWEEDWGSKEQLRSPKTITAEVHPIPLRKPKSFGWFYRYDGKFPTIRK
KGKDKKKAKYDSLQELRKNKKELEFEQKLYKEKEEMLEKEKQLKINRLAQEVSETEREDL
EESEKIQYWVERLCQTRLEQISSADNEISEMTTGPPPPPPSVSPLAPPLRRFAGGLHLHT
TDLDDIPLDMFYYPPKSASALPVMPHPPPSNPPSKVSAPPVLPSSGRLSASSSPWVQRTP
PPIPIPPPPSIPTQDLTPTRPLPSALEEALGNHPLRTGETGNPAEDREAKNHGGKPANSP
VPDRSFPPTQKTFCPSPQPPRGPGVSTISKPVMVHQESNYVYRPPVKSEVLPQEMLKRMV
VYQTAFRQDFRKYEEGFDPYSMFTPEQIMGKDVRLLRIKKEGALDLALEGGVDSPIGKVV
VSAVYEGGAAERHGGIVKGDEIMAINGKIXTDYTLAEAEAALQKAWNQGGDWIDLVXAVC
PPKEYDDELPSLPSSXAKSPQPV
NT seq 2592 nt   +upstreamnt  +downstreamnt
atggatcggaaggtggcccgagaattccggcacaaggtggactttctgattgaaaatgat
gcagaaaaggactatctctatgatgtgctgcggatgtaccaccagaccatggacgtggcc
gtgcttgtgggggacctgaagctggtcatcaacgagcccagccgtctgcccctgttcgat
gccatcaggcctctgatcccactgaaacaccaggtggagtacgaccagctgaccccccgg
cgctccaggaagctgaaggaggtacgtctggaccggctgcaccccgaaggcctcggcctc
agcgtgcgtggcggcctygagtttggctgtggactcttcatttcccacctcatcaaagat
ggccaggccgacagcgttgggctccaggtaggggatgagatcgtccggatcaatgggtat
tccatctcctcctgcacccatgaggaggtcatcaacctcatccgcaccaagaagactgtg
tccatcaaagtgagacacatcggcctgatccctgtgaagagctctcccgacgagcccctc
aaatggcagtatgtggaccagtttgtgtcggaatctgggggcgggcggagcagcctgggc
tcccccggcagccaggaaaacaaggagaagaaggtcttcatcagcctggtgggctcccgg
ggccttggctgcagcatttccagcggccccatccagaaacccggcatcttcatcagccat
gtgaagcctggctccctgtctgctgaggtggggttggagacaggggaccagattgttgaa
gtcaatggcatcgacttctccaacttggaccataaggaggccgtgaacgtgctgaagagt
agccgcagcctgaccatctccatcgtagctggagctggccgggagctgttcatgacagac
cgggagcggctggcggaggtccggcagcgcgagctgcagcggcaggagctcctgatgcag
aagcggctggcgatggaatccaacaagatcctccaggagcagcaggagatggagaggcaa
aggaaaaaggaaattgcccagaaggcagcagaggagaatgagagataccggaaggagatg
gaacagatcgtggaggaggaagagaagttcaggaagcagtgggaagaagactggggctca
aaggaacagctgcgttcacctaaaaccatcaccgccgaggtgcacccgataccccttcgc
aagccaaagtcctttggctggttttatcgttacgatggcaaattcccaaccatccggaag
aaaggaaaggataagaagaaagccaagtatgatagccttcaggagttgagaaagaataag
aaggaactggagtttgagcagaagctttacaaagagaaagaggaaatgctggagaaggaa
aagcaactgaagatcaaccggctggcccaggaggtatctgagacagagcgggaagacctt
gaggagtcggaaaagattcagtattgggtggaaaggctctgtcagacacgccttgagcag
atttcctctgctgataatgagatttcagagatgaccacagggcccccacctcccccgccc
tctgtgtctcccctggccccgcccctgagacgcttcgcaggcgggctgcacctgcacacc
actgacctggatgacatccccttggacatgttctactatccccccaagagtgcctctgcc
ttgcctgtgatgcctcaccctccaccctccaacccaccctccaaggtgtccgcaccccct
gtcctgccctcatcgggccgcctgagtgcctcttcctcgccctgggtgcagcgcactcca
ccccccattcccatccctcccccgccctccattcccacgcaagacctcactcccacccgc
ccgctgccctcggcactggaagaagcgctgggcaaccacccgttgcgcactggggagaca
ggcaatccagcagaggaccgggaggccaagaaccacggggggaagcctgccaactctcct
gtccccgatcggagcttcccacccacccagaagacattctgcccaagcccacagcctcca
cgaggccctggcgtgtccaccatctccaagcctgtcatggtccaccaggagtccaactat
gtctacaggccacctgtgaaatccgaggtcctgccacaggagatgttgaagaggatggtg
gtttatcagacagcgttccgacaagatttccggaaatatgaggaaggcttcgacccctac
tccatgttcaccccggagcagatcatggggaaggatgtccggctcctgcgcattaagaag
gagggagctttagacctggccctggaaggcggcgtggactccccgatygggaaggtggtt
gtctccgccgtttacgagggtggagctgctgagcggcatggtggcattgtgaaaggggat
gagatcatggccatcaatggcaagatcrtgacagactacaccttagctgaggctgaggcc
gccttgcagaaggcctggaatcaagggggagactggatcgaccttgtyrtcgccgtctgt
ccccccaaggagtatgacgatgagctcccctctcttccctcttctgyagccaaaagcccc
cagccagtctga

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