Bos indicus (zebu cattle): 109569202
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Entry
109569202 CDS
T04792
Symbol
USH1C
Name
(RefSeq) harmonin
KO
K21877
harmonin
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
biu03037
]
109569202 (USH1C)
Cilium and associated proteins [BR:
biu03037
]
Primary cilia and associated proteins
USH complex and associated proteins
109569202 (USH1C)
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GFIT
Motif
Pfam:
USH1C_N
PDZ
PDZ_6
PDZ_2
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
109569202
NCBI-ProteinID:
XP_019830073
UniProt:
A0A6P5CWP3
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Position
15:33778422..33825488
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AA seq
863 aa
AA seq
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MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVGDLKLVINEPSRLPLFD
AIRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKD
GQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLIPVKSSPDEPL
KWQYVDQFVSESGGGRSSLGSPGSQENKEKKVFISLVGSRGLGCSISSGPIQKPGIFISH
VKPGSLSAEVGLETGDQIVEVNGIDFSNLDHKEAVNVLKSSRSLTISIVAGAGRELFMTD
RERLAEVRQRELQRQELLMQKRLAMESNKILQEQQEMERQRKKEIAQKAAEENERYRKEM
EQIVEEEEKFRKQWEEDWGSKEQLRSPKTITAEVHPIPLRKPKSFGWFYRYDGKFPTIRK
KGKDKKKAKYDSLQELRKNKKELEFEQKLYKEKEEMLEKEKQLKINRLAQEVSETEREDL
EESEKIQYWVERLCQTRLEQISSADNEISEMTTGPPPPPPSVSPLAPPLRRFAGGLHLHT
TDLDDIPLDMFYYPPKSASALPVMPHPPPSNPPSKVSAPPVLPSSGRLSASSSPWVQRTP
PPIPIPPPPSIPTQDLTPTRPLPSALEEALGNHPLRTGETGNPAEDREAKNHGGKPANSP
VPDRSFPPTQKTFCPSPQPPRGPGVSTISKPVMVHQESNYVYRPPVKSEVLPQEMLKRMV
VYQTAFRQDFRKYEEGFDPYSMFTPEQIMGKDVRLLRIKKEGALDLALEGGVDSPIGKVV
VSAVYEGGAAERHGGIVKGDEIMAINGKIXTDYTLAEAEAALQKAWNQGGDWIDLVXAVC
PPKEYDDELPSLPSSXAKSPQPV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggatcggaaggtggcccgagaattccggcacaaggtggactttctgattgaaaatgat
gcagaaaaggactatctctatgatgtgctgcggatgtaccaccagaccatggacgtggcc
gtgcttgtgggggacctgaagctggtcatcaacgagcccagccgtctgcccctgttcgat
gccatcaggcctctgatcccactgaaacaccaggtggagtacgaccagctgaccccccgg
cgctccaggaagctgaaggaggtacgtctggaccggctgcaccccgaaggcctcggcctc
agcgtgcgtggcggcctygagtttggctgtggactcttcatttcccacctcatcaaagat
ggccaggccgacagcgttgggctccaggtaggggatgagatcgtccggatcaatgggtat
tccatctcctcctgcacccatgaggaggtcatcaacctcatccgcaccaagaagactgtg
tccatcaaagtgagacacatcggcctgatccctgtgaagagctctcccgacgagcccctc
aaatggcagtatgtggaccagtttgtgtcggaatctgggggcgggcggagcagcctgggc
tcccccggcagccaggaaaacaaggagaagaaggtcttcatcagcctggtgggctcccgg
ggccttggctgcagcatttccagcggccccatccagaaacccggcatcttcatcagccat
gtgaagcctggctccctgtctgctgaggtggggttggagacaggggaccagattgttgaa
gtcaatggcatcgacttctccaacttggaccataaggaggccgtgaacgtgctgaagagt
agccgcagcctgaccatctccatcgtagctggagctggccgggagctgttcatgacagac
cgggagcggctggcggaggtccggcagcgcgagctgcagcggcaggagctcctgatgcag
aagcggctggcgatggaatccaacaagatcctccaggagcagcaggagatggagaggcaa
aggaaaaaggaaattgcccagaaggcagcagaggagaatgagagataccggaaggagatg
gaacagatcgtggaggaggaagagaagttcaggaagcagtgggaagaagactggggctca
aaggaacagctgcgttcacctaaaaccatcaccgccgaggtgcacccgataccccttcgc
aagccaaagtcctttggctggttttatcgttacgatggcaaattcccaaccatccggaag
aaaggaaaggataagaagaaagccaagtatgatagccttcaggagttgagaaagaataag
aaggaactggagtttgagcagaagctttacaaagagaaagaggaaatgctggagaaggaa
aagcaactgaagatcaaccggctggcccaggaggtatctgagacagagcgggaagacctt
gaggagtcggaaaagattcagtattgggtggaaaggctctgtcagacacgccttgagcag
atttcctctgctgataatgagatttcagagatgaccacagggcccccacctcccccgccc
tctgtgtctcccctggccccgcccctgagacgcttcgcaggcgggctgcacctgcacacc
actgacctggatgacatccccttggacatgttctactatccccccaagagtgcctctgcc
ttgcctgtgatgcctcaccctccaccctccaacccaccctccaaggtgtccgcaccccct
gtcctgccctcatcgggccgcctgagtgcctcttcctcgccctgggtgcagcgcactcca
ccccccattcccatccctcccccgccctccattcccacgcaagacctcactcccacccgc
ccgctgccctcggcactggaagaagcgctgggcaaccacccgttgcgcactggggagaca
ggcaatccagcagaggaccgggaggccaagaaccacggggggaagcctgccaactctcct
gtccccgatcggagcttcccacccacccagaagacattctgcccaagcccacagcctcca
cgaggccctggcgtgtccaccatctccaagcctgtcatggtccaccaggagtccaactat
gtctacaggccacctgtgaaatccgaggtcctgccacaggagatgttgaagaggatggtg
gtttatcagacagcgttccgacaagatttccggaaatatgaggaaggcttcgacccctac
tccatgttcaccccggagcagatcatggggaaggatgtccggctcctgcgcattaagaag
gagggagctttagacctggccctggaaggcggcgtggactccccgatygggaaggtggtt
gtctccgccgtttacgagggtggagctgctgagcggcatggtggcattgtgaaaggggat
gagatcatggccatcaatggcaagatcrtgacagactacaccttagctgaggctgaggcc
gccttgcagaaggcctggaatcaagggggagactggatcgaccttgtyrtcgccgtctgt
ccccccaaggagtatgacgatgagctcccctctcttccctcttctgyagccaaaagcccc
cagccagtctga
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