Bos indicus (zebu cattle): 109570337
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Entry
109570337 CDS
T04792
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03013
Nucleocytoplasmic transport
biu05014
Amyotrophic lateral sclerosis
biu05200
Pathways in cancer
biu05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109570337 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109570337 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
109570337 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
109570337 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109570337 (TPR)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109570337 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
109570337
NCBI-ProteinID:
XP_019831770
UniProt:
A0A6P5D1L8
LinkDB
All DBs
Position
16:complement(65154618..65218484)
Genome browser
AA seq
2436 aa
AA seq
DB search
MPSSGSVSRNRQRGRPMTSRSFDGSRRGSLGRAGARELPSEEVEAAARTSGSSVSSPFFX
VSAASTAAAAVPGPVDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHE
KFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLELEKLNSQLKALTEKNKELEVXQD
RSIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYITEDFKRLNEKLKESNATKGELQL
KLDELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKC
NLENKKEEVSRMEEQMNGLKASNENLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDQLHRLLKSTGEASKGFQEHIIEVEESKDRMEKEMLE
KIRKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSIKLEQAMKE
IQRLQEDTDKANKHSSVLERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKISELQVKLE
NALTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGVAIPLQASSLDDISLVSTPKR
SSTSQTASTPAPVIEPAEAIEAKAALKQLQEIFENYKKEKADNEKMQNEQLEKLQEQVTD
LRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQD
LRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGIL
ERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNL
HLNTKELLKNAQKEIASLKQHLSNMEVQLASQSSQRTGKGQPSNKEDMDDLLSQLRQAEE
QVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEK
KLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLNSVQNEVQEALQRASTALSNEQQARR
DCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETAQKAESQLLE
CKASWEERERMLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVSSMKEGVQGPLNVSL
SEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAER
EKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILP
LQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVNQQKDPDTEEYRKLLSEKEVHTK
RIQQLTEELGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKENIQKELDAKIIDIQE
KVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLSQA
ETKSKSLENQVENLQKTLSEKEIEARSLQEQTLELQSELARLRQDLQDRTTQEEQLRQQI
TEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQY
EGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASMSDPPT
ANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQ
EAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSIPQPILTVQQQTQATAFVQPTQQSHPQI
EPTNQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASDQI
SDDTVEMPLPKKLKSVIPVGTEEEVMAEESTDGEVETQVYTQDSQDSIGEGVTQGDYTPM
EDSEETSQSLQIDLGPLQSDQQTASSQDGQGKGDDVIVIDSDDEEEEEDENDGEHEDYEE
DEDDDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGES
NQRAADSQNSGEGNTGTAESSFSQEISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTI
HAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTD
GFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESG
GRSVPTTPLQVAAPVTVFTESTASDASEHASQSVPMVTTSTGTLSTTNETAAGDDGDEVF
VEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVR
LQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtgtctagaaaccgccaaagaggacgacccatgacatcccga
agctttgacgggtcccgccgcgggagtctcgggcgggcgggcgcgcgcgagctaccgagt
gaggaggtcgaggcggctgcccggacctctgggtcctctgtgtcttcgcctttctttgmc
gtttctgccgcgtcgaccgctgccgccgcggtccccggcccagtcgacatggcggcagtg
ttgcagcaggtcctggagcgcacggagctgaacaagctgccgaagtccgtccagaacaaa
cttgagaagttccttgctgaccagcagtccgagatcgacggcctgaaggggcggcacgag
aaatttaaggtggagagcgaacaacagtactttgagattgagaagagactgtcccacagt
caggagagacttgtgaatgaaacccgagagtgtcaaagcttgcggcttgagctagagaag
ctcaacagtcaattgaaggcacttaccgagaaaaacaaggaacttgaagttkctcaggat
cgcagtattgccattcagagccagtttacaaggacgaaggaagaattggaagctgagaaa
agagacttaattagaaccaatgagagactatctcaagaacttgaatatataacagaggat
tttaaacgtctaaatgaaaaacttaaggaaagcaatgcaacaaagggtgagcttcagtta
aaactggatgaacttcaagcttctgatgtttctgttaagtatcgagaaaagcgcttggag
caagaaaaggagttgttacataatcagaatacttggctcaatacagagttgaaaaccaaa
actgatgaacttctggctctcggcagagaaaaaggraatgaaattctagagcttaaatgt
aatcttgaaaacaaaaaggaggaggtttctagaatggaagaacagatgaatggcctgaaa
gcatcaaatgagaatcttcaaaagcatgtagaggatctgttgaccaaactgaaagaggcc
aaggaacagcaagctagtatggaagagaaattccacaatgaattaaatgctcacataaaa
ctctctaacctttacaagagtgctgctgatgattcagaggcaaagagcaatgaactgacc
cgagcagtggaccagctacacagacttttgaagtcaactggagaagccagtaaaggattt
caggaacatatcatagaggtggaagaatctaaagatcgaatggaaaaagaaatgcttgag
aaaataaggaaattagagaaggaattagagaatgcaaatgacctgctttctgccacaaaa
cgtaaaggggccatcttatctgaagaagagcttgcagccatgtctcctactgcggccgct
gtagctaagatagtgaaacctggcatgaagttaactgagctgtataatgcttatgtggaa
actcaggatcagctgcttttggagaaactagaaaacaaaagaattaataagtatctagat
gaaatagtgaaagaagttgaagccaaagcaccaattttgaaacgccaacgtgaggagtat
gagcgtgcacagaaagctgtggcaagtttatccattaagcttgaacaagccatgaaggag
attcagcgattacaggaggacacagataaagccaataaacattcatctgtgcttgaaaga
gacaatcaaagaatggaagtacaaataaaagatctttcacaacagattagagtgcttctg
atggaacttgaagaagcgaggggtaaccatgtaatccgtgatgaggaagtaagctctgct
gatataagtagttcatctgaagtaatatcacagcatctagtatcttatagaaacattgaa
gagcttcaacagcaaaatcaacgtctcttagtagcccttcgggaacttggggaaaccaga
gaaagagaagaacaagaaacaacttcatccaaaatttctgagcttcaggtcaaacttgag
aatgccctcactgaattggaacaactccgtgaatcacggcagcatcaaatgcagcttgtt
gattctatagttcgtcagcgtgatatgtaccgaattctgttgtcacagacaacgggagtt
gccattcctttacaagcttcaagcttagatgatatttctcttgtgtcaactccaaaacgc
tcaagtacatcacagacagcttccactcctgctccagtgattgagccagcagaggctata
gaggctaaggctgcacttaaacagctgcaggaaatttttgagaactacaaaaaagaaaag
gcagataatgaaaaaatgcagaatgagcagcttgagaaacttcaggagcaagtcacagat
ttgcgatcacaaaataccaaaatctctacccagctagattttgcttctaaacgttatgaa
atgctacaagataatgttgaaggataccgtcgagaaataacatccctacatgaaagaaat
cagaaactcactgcaacaactcagaagcaagaacagatcatcaacacaatgacgcaggat
ttgagaggagctaatgaaaagctagctgttgcagaagtaagagcagaaaatctgaaaaag
gaaaaggaaatgcttaaattgtcagaagtccgtctttctcagcaaagagaatctttgttg
gccgaacaaagagggcaaaacttactgcttactaatctgcagacaattcagggaatatta
gagcgatctgaaacagaaaccaaacaaaggcttagtagccagatagaaaaactggaacat
gaaatatcccatctaaagaagaagttggagaatgaggtggaacagaggcatacacttact
agaaatctggatgttcaacttttagatacaaagagacagctggatacggagacaaatctt
catcttaacacaaaagaactgttaaaaaatgctcagaaggaaattgcttcattgaaacag
cacctcagtaatatggaagtccaacttgcttctcagtcttcacagagaactggtaaaggt
cagcctagcaacaaagaagatatggatgaccttctgagccagctaaggcaggcagaagag
caggtgaatgacttgaaggaaagactcaaaacaagcactagtaatgtggaacagtatcgt
gcaatggttactagtttggaagagtccctcaacaaggaaaaacaggtgacagaagaagta
cgtaagaatattgaagttcgcttaaaagagtcagccgaatttcagacacagctggaaaag
aagttgatggaagtagagaaggaaaaacaggaacttcaggatgacaagagaaaagctata
gagagcatggaacaacagttatctgagttaaagaaaacactcaatagtgttcagaatgaa
gtacaagaagctcttcagagagcaagcacagctttgagtaatgaacagcaagccagacgg
gactgtcaggaacaagctaaaatagctgtggaagctcagaataagtatgagagagaactg
atgctgcatgctgctgatgttgaagctctccaagctgccaaggaacaggtttccaaaatg
gcatcagtgcgtcagcatttggaagaaacagcccaaaaagcagaatcacagttgttggaa
tgtaaagcatcttgggaagaaagagagagaatgttaaaggatgaagtttctaagagtgtg
tctcgctgtgaagatctagaaaaacaaaacaggttactccatgatcagattgaaaaatta
agtgacaaagtcgtttcctcaatgaaggaaggtgtacaaggtccattgaatgtatctctc
agtgaagaaggaaaatctcaagaacaaattttagaaattctcagatttatacggcgagaa
aaagaaattgctgaaactagatttgaagtggctcaagttgagagcctgcgatatcgacaa
agggttgaacttttagaaagagagctgcaggaactgcaggatagcctaaatgctgaaagg
gagaaagttcaggtaactgcaaaaacaatggcccagcatgaggaactgatgaagaaaacc
gaaacaatgaacgtagtcatggaaaccaataagatgctgagagaagagaaggagaggctg
gaacaggatctacagcagatgcaagccaaggtcaggaaactggagttagatattttaccc
ttacaagaagcaaatgctgaactgagtgagaaaagtggtatgttgcaagcagagaagaag
ttattagaagaagatgtcaaacgttggaaagcacgtaaccagcatctagtgaatcaacag
aaagatccagatacagaagaatatcgtaagctgctttctgaaaaggaagttcacactaag
cgtattcagcaattgactgaagaacttggaagacttaaagctgaaattgcaagatcaaat
gcatctttgactaacaaccagaacttaatccagagtctaaaggaagatttaaataaagta
agaacagaaaaggaaaatatccagaaggagttagatgccaaaataattgatattcaagaa
aaggttaaaactattactcaagtcaagaaaattggacgtaggtacaagactcaatatgaa
gaacttaaagcacaacaagataaggtcatggagacctcagctcagtcttctggagaccat
caggaacagcacgtctcagtccaggaaatgcaggagctcaaagagaccctaagccaagct
gaaaccaagtcaaagtcactcgagaatcaagtggagaacctgcagaagactttatctgag
aaagagatagaagcaagaagtctccaggaacagactctggagcttcaatctgaacttgca
cgacttcgtcaggaccttcaagatagaaccacacaggaagagcaactccgacagcagata
actgaaaaggaagaaaaaacaagaaaggccattgtagcagcaaaatcaaaaattgcacat
ttagctggtgtaaaagatcagctaactaaggaaaatgaagagcttaaacaaaggaatgga
gccttagatcagcagaaagatgaactggatgttcgtatgactgctcttaaatcccagtac
gaaggtcgaattagtcgcttggagagagaactcagggagcatcaagagagacaccttgag
cagagagacgagcctcaggaacctaccaataaggtcccagaacagcagagacagatcacg
ttgaaaacaactccagcttctggtgaaagaggaattgccagcatgtcagacccaccaaca
gccaatatcaagccaacccctgttgtatctacgccaagtaaagtgacagctgcagctatg
gctgggaataagtcaacacccagagctagtatccgcccaatggttacacctgcaactgtt
acaaatcctactactaccccaacagccacagtgatgcccactacacaagtggagtcacag
gaagccatgcagtcagaagggcctgtggaacatgttccagttttcggaagcacaagtgga
tctgttcgttctaccagtcctaatgtccagccttctatccctcaacccattttaactgtt
cagcaacaaacacaggctacggcttttgtgcagcctactcaacagagtcatcctcagatt
gagcctacaaatcaagaactatccccaaacatagtggaggtggttcagagttcaccagtt
gagcggccttctacttccacagcagtatttggcactgtttcagctaccccaagttcttct
ttgccaaagcgtacacgtgaagaggaagaagatagcaccatagaagcatcagaccagatt
tctgatgatacagtggaaatgcctcttccaaagaagctgaaaagtgttatacctgtagga
actgaggaggaagttatggcagaagaaagtactgatggagaggtagagactcaagtatac
acccaggattctcaagattccattggagaaggagtcacccagggagattatacgccaatg
gaagacagtgaagaaacctctcaatctctacaaatagaccttgggcctcttcagtcagat
caacaaacagcttcatctcaagatggtcagggcaaaggagatgatgtcattgtaattgac
agtgatgatgaagaggaggaggaggatgaaaatgatggggaacatgaggattatgaagaa
gatgaagacgatgatgatgatgatgaagatgacacagggatgggagacgagggtgaagat
agtaacgaaggtaccggcagtgcggacggcaatgacggatatgaggctgatgatgctgag
ggtggtgacgggactgatccaggtacagaaacagaagaaagtatgggtggaggtgaaagt
aatcagagagcagctgattctcaaaacagtggcgaaggaaatactggtactgcagagtcc
tctttttcccaggagatatctagagaacagcagccatcatcggcatctgaaagacagacc
ccccgagcacctcagtcaccaagacgcccaccacacccacttcccccaagactgaccatt
catgctccacctcaggagctgggaccgccagttcagagaattcagatgacccgaaggcag
tctgtaggacgtgggcttcagttgactccaggaataggtggcatgcagcagcattttttt
gatgatgaagatagaacagttccaagtaccccaactctggtggtgccacatcgtactgat
ggatttgctgaagcaattcattctccacaggtagctggtgttcctagattccggtttggg
ccacctgaagatatgccacaaacaagttctagtcattctgatcttggccaacttgcttct
caaggaggtttgggaatgtatgaaacaccccttttcctagctcatgaagaggagtcgggt
ggccgaagtgttcctactactcctctgcaagtagcagccccagtgaccgtatttactgag
agcaccgcctccgatgcctcagagcacgcttctcagtctgtgccaatggtgacaacgtcc
actggtactttatccacaacaaacgaaacagcagcaggtgatgatggagatgaagtattt
gtggaggcagaatctgaaggtattagttcagaagcaggcctcgaaattgatagccagcag
gaagaagagcctgttcaggcctctgatgagtcagatcttccttccaccagccaggaccct
ccttccagttcttctgtagatactagcagtagtcagccgaagcctttcagacgagtaaga
cttcagacaacattgagacaaggtgtccgtggtcgccagtttaacagacagagaggtgtg
agccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
