Bos indicus (zebu cattle): 109570500
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Entry
109570500 CDS
T04792
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109570500 (SOX13)
Transcription factors [BR:
biu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109570500 (SOX13)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109570500
NCBI-ProteinID:
XP_019832055
UniProt:
A0A6P5D2F0
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Position
16:865593..910416
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AA seq
603 aa
AA seq
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MSMXSPGSAQLVLDEVGTMVNCTVKAEGKKEPCYEDPQGSATAAESQPGDPARTPQNGAD
PQAPTQGDRDIQCVSQDSSSLENSESPEPRRPGGSEAASGSQEKLDFNRNLKEVVPAIEK
LLSSGWKEKFLGRSSVETKDVKGTKESLAEKELQLLVMIHQLSALRDQLLTAHSEQKNMA
AMLLEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQ
PLPVTPDSQLALPIQPIPCKPVEYPLQLLHSPPAPVVKRPGALPAHHPLQEPSQPLNLTA
KPKASELPNSSSSPNLKLSNCGPRPPSHGAPTLDLQANPPSLPLGFLGEGDAVTKAIQDA
RQLLHGHSGALDTSPSAPFRKDLISVDTSPAKERLEDSCVHPLEEAMLGCDMDGSRHFPE
SRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQ
ARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYATPQQTSQV
QMSPSEVLYPRXXGVPLAQPLVEHCVPRGLDPNMPVIVNTCSLREEGEGXEDRHSAADGE
VYR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgrggagccccggctctgcccagctggtcctggatgaagtgggcaccatggtg
aactgtactgtcaaggcagaggggaagaaggagccctgttacgaggacccccaaggctcg
gcgactgcagctgaatcgcagcctggagacccagcccgcaccccccagaatggtgctgac
ccgcaagctccaacccagggtgacagggacattcagtgtgtctcgcaggacagcagctcc
ctggagaacagtgagtccccagaacccaggagaccaggaggttccgaggctgcttctgga
agccaggagaagctggacttcaacagaaacttaaaagaagttgtgccrgccatcgagaag
ttgctgtccagtggctggaaggagaagttcctgggaaggagctctgtggaaaccaaagat
gtcaaagggaccaaggagagcctggcggagaaggagctgcagcttctggtcatgatccac
cagctgtccgccctgcgggaccagctcctgacagcgcactcagagcagaagaacatggcc
gcgatgctcctggagaagcagcagcagcagatggagctggcccggcagcagcaggagcag
atcgctaagcagcagcaacagctgattcagcagcagcacaaaatcaacctccttcagcag
cagatccagcaggtcaacatgccttacgtcatgattccagccttccccccaagccaccaa
cctctgcccgttacccccgactcccagctggctctgcctattcagcccatcccctgcaag
ccagtggagtatccgctgcagctactgcacagcccccccgccccagtggtgaagaggcct
ggggccttgccagcccaccaccccctgcaggaaccctcccaaccgctgaacctcacggcc
aagcccaaggcttcggagctgcctaactcctccagctcccccaacctgaagctgagcaac
tgcggaccgcgtcccccaagccacggggcccccacgctggacctgcaggccaatccccct
agcctgcctttgggcttcctcggtgaaggggacgctgtcaccaaagccatccaggatgcc
cgacagctgctgcacggccacagcggagccttagacacttcccccagtgcccccttccgt
aaggacctcattagcgtggacacatctccagccaaggagcggctggaggacagctgtgtg
cacccactggaagaagccatgctgggctgtgacatggacggctcccgccacttccctgag
tcccggaacagcagtcacatcaagcggcccatgaacgccttcatggtgtgggccaaggac
gagagaaggaagatcctccaagccttcccagacatgcacaactccagcatcagcaagatt
ctcggctcccgctggaagtccatgagcaaccaggagaaacagccttactacgaggagcag
gccagactgagcaggcagcacctggagaagtacccagactacaagtacaagccgcggccc
aagcgcacctgcatcgtggagggcaagcggctgcgggtgggcgagtacaaggctctgatg
aggacgcggcgccaggatgcccgccagagctacgcgaccccccagcagaccagccaggtg
cagatgagcccctcagaagtcctgtacccgcgggnnnnaggcgtgcccctggcacagccc
ctggtggagcactgtgtgccccgcggcctggacccgaacatgccggtcatcgtcaacacc
tgcagcctcagggaggagggcgagggcrcagaggacaggcactcagcggctgacggtgag
gtgtaccggtag
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