Bos indicus (zebu cattle): 109571085
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Entry
109571085 CDS
T04792
Symbol
CLIP1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109571085 (CLIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109571085 (CLIP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
biu04812
]
109571085 (CLIP1)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
109571085 (CLIP1)
Cytoskeleton proteins [BR:
biu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
109571085 (CLIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Fungal_TACC
Motif
Other DBs
NCBI-GeneID:
109571085
NCBI-ProteinID:
XP_019832822
UniProt:
A0A6P5D7C8
LinkDB
All DBs
Position
17:55711821..55796056
Genome browser
AA seq
1438 aa
AA seq
DB search
MSMLKPSGLKAPTKILKPGSTALKTPAAVAAPIEKTISSEKASSTLSSETQEEFVDDFRV
GERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCELLKGIFTR
PSKLTRKVQAEDEADGPQTPHASRATSSLSTSGISMASSSPATPSNIPHKSSQPTAKEPS
ATSQISNLTKTASESISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGE
WCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVM
ATTPASMKRSPSASSLSSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEK
QQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAA
DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENTQTKLEHARIKEL
EQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPAG
DVDMSLSLLQEISALQEKLEATHSDHQKEVASLKEHFGAREEMHQKELKVLQAATEKLSK
ENESLKSKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGVGTETAEFAELK
TQIEKMRLDYQQEIENLQNKQDSERSAHTKELEALRAKLMQVIKEKENSLEAIQSKLDKA
EEQHLVEMEDTLNKLQEAELKVKELEVLQAKCNEQTKVIDHFTSQLKAAEEKLSDLDALQ
KASSEGKLEIENLRQQLEAAEKQIKNLEIEKDAESSKASSITKELQGKELMLNNLQENLS
EVSRVKEALEKELQTLKEKFADASEEAVSFQRSMQETVNKLHQKEEQFNALSSELEKLRE
NLTDMEAKFRERDEREEQLIKAKEKLENDIAAIMKMSGDNSSQLTKMNDELRLKERNVEE
LQLKLTKANENASLLQKSIGEVTLKAEQSQKEAAKKHEEEKKELLRKLSDLEKKMEMSWN
ECQDLKARYEEASSESRAKHEEVLQNLHKLLRDTEERLKAAQEENRELLQKLEELGKQAD
RARAAQTAEDAMQIMEQMTKEKTETLASLEDSKQTNEKLQNELDTLKENNLKNVEELNKS
KELLTVENQKIEEFKKEIETLKQAAAQKSQQLSALQEENVKLNEELGRSRDEVTSHQKLE
EERSVLNNQLLEMKKRESKLIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTALR
GENASAKSLHSVVQSLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQAEEDERAQE
SQIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGDDLNNYDSDDQEKQSKKKPRLFCD
ICDCFDLHDTEDCPTQAQMSEDPPHSTHHGSRSEERPYCDICEMFGHWATNCNDDETF
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgctaaaaccaagcgggcttaaggcccccaccaagattctgaagcctggaagc
acagccttgaagacgcctgctgctgttgctgctccaatagaaaaaacaatatccagtgaa
aaagcatcaagcactctgtcctctgagacacaagaggagtttgtggatgactttcgagtt
ggggagcgagtttgggtgaatgggaataagcctggatttatccagttcctgggagaaaca
cagtttgcaccaggccagtgggccgggatcgttttggatgagcccataggcaagaatgat
ggctcagtagcaggagttcggtacttccagtgtgagcttctaaaggggatatttacccga
ccttcaaagttgacgaggaaggtgcaggcagaggatgaagctgatggcccgcagacgcct
cacgcttccagggcgacttcgtctctgtccacttcgggaatcagcatggcgtcctcgtct
ccagccaccccctcaaatattccccacaaatcatcccaaccaaccgcaaaggaaccttca
gctacgtctcagatcagcaaccttacgaaaaccgccagcgaatctatctccaacctttca
gaggccggctcaatcaagaaaggagagagagaactcaaaatcggagaccgagtactggtt
ggtggcacgaaggccggtgtagtccggtttcttggggagacagacttcgccaagggggag
tggtgtggcgtggagttggatgagcctcttgggaagaacgacggggctgttgctggaaca
aggtattttcagtgtcaacccaaatatggcctgtttgctccggtccacaaagtcaccaag
attggcttcccctccaccacgccagccaaagccaaggccgctgcggtgaggcgagtgatg
gcgaccacgcccgccagcatgaagcgcagcccgtccgcctcctctctcagctccatgagc
tccgtggcctcctctgtgagcagcaagcccagccggacaggactgttgaccgaaacctcc
tcccgttacgccaggaagatctccggcaccaccgccctccaggaggccctgaaggagaag
cagcagcacattgagcagctgctggccgaacgggatctagagagggcggaggtggccaag
gccacgagccacgtgggggagatagagcaggagctcgccctggcccgggacggacacgac
cagcacgtcctggaattggaggccaagatggaccagctgcgaacgatggtggaagctgcc
gacagggagaaggtggaacttctcaaccaacttgaagaggagaaaaggaaggttgaggac
cttcagttccgggttgaagaagaatcgattactaagggcgatcttgagcaaaagagccag
atttctgaagatcctgagaatacgcagaccaaactggagcatgcccgcattaaggagctt
gaacagagcctgctctttgaaaagaccaaagctgacaaactccagagggagttagaagac
actagggtggccacggtgtcagaaaagtcccgcatcatggaactcgaaaaagacctcgca
ttgcgagtgcaggaggtagctgagctgcggaggcggctggagtccaataagccagctggg
gatgtggacatgtcactgtccctcttgcaagagatcagcgctttgcaggagaagttagaa
gccacccatagtgaccaccagaaagaagtcgcttctctgaaggagcattttggagcccgg
gaagaaatgcatcagaaggagttaaaggttttgcaggccgccacagagaagctttccaaa
gagaatgagtccctgaaaagcaagctcgaccatgccaacaaggagaattcagacgtgatc
gccctgtggaagtctaagctggagacagccatcgcgtcccaccagcaggccatggaggag
ctgaaggtgtccttcagcaagggggtcggcaccgagacagcygaattcgccgagttaaaa
acgcagatagagaaaatgagactggactaccagcaggaaatagaaaatctgcagaacaag
caagactcagaaaggtctgctcacacgaaagagctcgaagccctaagggctaagctgatg
caggtcattaaagagaaggagaacagtctggaagccatccagtcgaagttggacaaagcg
gaagagcagcacctagtggaaatggaggacaccttaaacaaactgcaggaagccgagcta
aaggtaaaggagctagaggtgctacaagccaaatgcaatgagcaaaccaaggttattgat
cattttacatcacagctcaaggctgccgaagaaaagctctcagaccttgatgcgcttcag
aaagccagctccgaaggtaaattggaaatcgagaacctcagacagcagcttgaggcagct
gagaaacagattaaaaacttagagattgaaaaggatgctgaaagcagcaaggctagtagc
atcaccaargagctgcagggaaaagagctaatgcttaataaccttcaggaaaacttgagt
gaagtcagtcgagtgaaagaggctttggaaaaagaactgcagactttgaaagaaaagttt
gctgatgcttcagaggaggcagtctcttttcagagaagtatgcaagaaactgtaaataaa
ttacatcaaaaagaggaacagtttaacgcactgtcttccgaactggagaagttgagagaa
aatttaacagatatggaggcaaaatttagagagagagatgaaagggaagagcagctgata
aaggcaaaagaaaaactggaaaatgacattgcagcaataatgaaaatgtctggagacaat
tcttctcagctgacaaaaatgaatgacgaactacgtctgaaagaaagaaatgtagaagaa
ttacagctgaaactaaccaaggctaatgaaaacgcaagccttctgcagaaaagtattggg
gaagtaactctcaaagctgaacagagtcagaaagaagcagctaaaaagcatgaggaagaa
aagaaagaactgctgagaaaactgtcagacctggaaaagaagatggaaatgagctggaac
gagtgtcaagatctgaaagccaggtacgaggaagccagttccgagagcagagccaagcac
gaagaagtcctgcagaacctccacaagctgctacgggacacagaggagcggctgaaggca
gcacaggaggagaaccgcgagctgctgcagaagctggaggagctggggaagcaagccgac
agagccagagctgctcaaaccgctgaagatgccatgcagataatggaacagatgaccaaa
gagaagactgaaacactggcctccttggaagattccaagcaaacaaatgaaaaactgcag
aatgaattggatacacttaaagaaaacaacttgaaaaacgtggaagagctgaacaaatca
aaagagcttctgacrgtagagaaccaaaaaatagaagaattcaagaaagaaatagaaacc
ctaaagcaggcagcagctcagaagtcccagcagctctcagcgctgcaagaagagaacgtg
aaacttaacgaggagctggggaggagcagggacgaagtcaccagtcaccaaaagctggaa
gaagagagatcggtgctcaataatcagttgttagaaatgaaaaagagagaatccaagtta
ataaaagacgcagatgaagaaaaagcttccttgcagaaatccatcagtatcactagtgcc
ttactcacagaaaaggatgccgagctggaaaaactgagaaatgaggtcacggcgctcagg
ggagagaacgcgtccgccaagtccttgcattcagttgttcagtctctagagtctgataag
gtgaagcttgagctcaaggtaaagaacttggagcttcaactcaaagaaaacaagaggcag
ctcagcagctcctcaggtaatactgatactcaggcagaagaggatgaaagagcccaggag
agtcagattgacttcctcaattcagtaatagtggaccttcagaggaagaatcaggacctc
aagatgaaggtggagatgatgtcagaagcagccctgaatgggaacggggacgacctgaac
aactacgacagtgatgaccaggagaaacagtccaagaagaaaccccgcctcttctgtgac
atatgtgactgcttcgatctccacgacacagaggattgtcccacccaggcccagatgtcc
gaggacccgccccactccacacaccacggcagtcggagcgaggaacgcccctactgtgac
atctgtgagatgtttgggcactgggctaccaactgcaatgacgacgagaccttctga
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