KEGG   Bos indicus (zebu cattle): 109571280
Entry
109571280         CDS       T04792                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109571280 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:biu03041]
    109571280 (SF3A1)
Spliceosome [BR:biu03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109571280 (SF3A1)
 Complex B
    109571280 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    109571280 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 109571280
NCBI-ProteinID: XP_019833200
UniProt: A0A6P5D5V5
LinkDB
Position
17:complement(72843497..72862843)
AA seq 793 aa
MPAGPVQAVPXXXXAATEPKQPTEEEASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQASQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFTKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKAEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPASKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAV
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggcggtgccccnnnnnnnnnccgcggccaccgagcccaaa
cagcccacagaagaagaagcatcttcaaaggaggattctaccccatccaagccygtggtg
ggtattatttaccctcctccggaggtcaggaacatcgttgacaagactgccagcttcgtg
gccagaaatggacctgaatttgaagcgaggatacgacagaacgagatcaacaaccccaag
ttcaacttcctgaaccccaacgacccttaccatgcctactaccggcacaaggtcagcgag
ttcaaggagggcaaggctcaggagccctcggccgccatccccaaggtcatgcagcagcag
cagcaggcctcccagcagcagctgccccagaaggttcaagcccaagtgatacaagaaacc
attgtgcccaaagagccccctcccgagtttgagttcatcgcagaccccccttccatctca
gccttcgacctggacgtggtgaagctgacagctcagtttgtggccaggaatgggcgccag
tttctgacccagctgatgcagaaagagcagcgcaactaccagtttgacttcctgcgcccg
cagcacagcctcttcaactacttcacgaagctggtggagcagtacaccaagatcttgatt
ccacccaaaggcttatttaccaaactcaagaaggaggcagagaacccccgggaagttttg
gaccaggtgtgttatcgcgtggagtgggccaagttccaggagcgtgagaggaagaaggag
gargaggagaaggagaaggagcgggttgcctacgctcagatcgactggcatgacttcgtg
gtggtggaaacagtggacttccaacccaacgagcaagggaacttccccccgcccaccacc
ccggaggagctgggggcccggatccttattcaggagcgctacgagaagtttggggagagc
gaggaggtcgagatggaggttgagtccgatgaggaggacgagaaacaggagaaggcggag
gagcctccgtcccagctggaccaggacactcaagtacaagacatggacgagggttcggat
gatgaagaagaagggcagaaagtgccgccacccccggagacacccatgccacctcctctg
cccccaactccagaccaggttattgtccggaaggactatgacccaaaagcttccaagcct
ctgcctccagcccccgctcccgatgagtatcttgtgtcccccattactggggagaagatc
cctgccagcaagatgcaggagcacatgcgcattgggcttctcgacccccgttggctggag
cagcgggatcgctccatccgtgagaagcagagcgatgacgaggtgtacgcgccaggtctg
gatatcgagagcagcttgaagcagctggccgagcggcgtacagacatctttggtgtggag
gaaacggccatcggtaagaagatcggcgaggaggagatccagaagccggaagagaaggtg
acctgggacggccactctggcagcatggcccggacccagcaggccgcccaggccaacatc
accctccaggagcagattgaggccatccacaaggcgaagggcctggtgccggaggatgac
accaaagagaagatcggcccgagcaagcccaacgagatcccccagcagccgccgccgccg
tcctcagccaccaacatccccagctcggccccgcccattacatcggtgccccggccgccc
gcgatgccgcctcccgtccgcaccacagttgtgtccgcagtacctgtcatgccccggccc
ccgatggcatccgtggtccggctgcccccaggctcagtgatcgcccccatgccgccgatc
atccacgcgcccaggatcaacgtggtgcccatgcctccctcrgcccctcctatcatggcg
cctcgcccaccacccatgattgtgccgacagcttttgtgcccgccccgcccgtggcacct
gtccctgctccagcccccatgccgcctgtmcaccccccgcctcccatggaagacgagcct
gcctctaagaaactgaagaccgaggacagcctcatgcccgaggaggagtttctgcgcaga
aacaagggtccagtgtccatcaaagtccaggtgcccaacatgcaggataagacagaatgg
aaactgaatggacaggtgctggtcttcaccctccccctcacagaccaggtctccgtcatc
aaggtgaagattcatgaagccacaggcatgccagcagggaaacagaagctgcagtacgag
ggcattttcatcaaggattccaactcgctggcttactacaacatggccaacggtgccgtc
atccacctggcgctcaaggagagaggcgggaggaagaagtag

DBGET integrated database retrieval system