Bos indicus (zebu cattle): 109571374
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Entry
109571374 CDS
T04792
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04151
PI3K-Akt signaling pathway
biu04510
Focal adhesion
biu04512
ECM-receptor interaction
biu04820
Cytoskeleton in muscle cells
biu04926
Relaxin signaling pathway
biu04933
AGE-RAGE signaling pathway in diabetic complications
biu04974
Protein digestion and absorption
biu05146
Amoebiasis
biu05165
Human papillomavirus infection
biu05200
Pathways in cancer
biu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
109571374 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109571374 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109571374 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109571374 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
109571374 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
109571374 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
109571374 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
109571374 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
109571374 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
109571374 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
109571374 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
biu04147
]
109571374 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
biu00536
]
109571374 (COL4A3)
Exosome [BR:
biu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109571374 (COL4A3)
Glycosaminoglycan binding proteins [BR:
biu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109571374 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109571374
NCBI-ProteinID:
XP_019833362
UniProt:
A0A6P5D8V4
LinkDB
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Position
2:119831191..119993297
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AA seq
1670 aa
AA seq
DB search
MRPRTAPRPPALLLTLLLVLLVAAPTEGKGCICKDKGQCFCDGAKGEKGEKGFPGPPGPP
GQKGYPGPEGLPGPQGPKGSPGSPGLTGAKGVRGITGLPGFSGPPGLPGIPGHPGPYGLA
GLPGCNGSXGEPGFPGLRGTPGYPGIPGVIGLKGEKGAPAEGEGVGLDGKGDPGLPGAPG
FQGLPGLPGFPGPAGPLGPPGFLGFPGTMGPPGPKGHMGDNVLGQKGERGVKGLTGPPGP
PGTVIVTLTGPDNRTDLKGEKGDLGAMGQSGPPGPSGPPGESYGSEKGAPGEPGXQGKPG
KDGAPGFPGTEGAKGDRGFPGLRGEDGIKGWKGNSGPPGFRGPTEYYDAYQEKGDEGIPG
LPGPKGARGPQGPSGPPGAPGSPGSSRPGLQGAPGVPGVKGSKGEQGPPGKTAAGLPGSP
GCPGSPGPMGFPGPPGPPGGIVFREGPPGVGGLPGHIGSPGIPGVGGPKGEPGLLCTQCP
CIPGSPGPPGFPGLEGEKGFQGEPGAAGIKGSPGSPGSAGLPGFPGFPGAQGQPGLKGEK
GETPRPEGEVGAPGDPGLQGHPGRKGLDGIPGTPGVKGLPGPKGEPALSGEKGDPGLPGD
PGIPGSPGPIGPAGPSDYGPQGEPGPKGAQGLPGAPGPPGEAGPEGETGVSTPVPGLPGP
PGPPGRAGPRGPPGIPGSTGECDLGLPGPDGEPGIPEIGFPGPPGPKGDRGFPGAKGSPG
CPGEMGKPGLPGKPGLPGIKGEPGLAMPGEPGAPGLPGERGSSGEXGEIGLPGLPGLPGV
PGTGGLDGPRGDPGKPGPPGERGPPGRCTEGPRGTQGLPGLNGLKGQQGRRGETGPKGDP
GIPGLDRSGFPGEPGLPGMPGHRGEMGPPGPKGYPGNPGFLGPPGEXGIMGMMGFPGNIG
PPGPPGSPGTPGQKGSFGIPGVKGARGPPGAQGEQGERGTPGSPQIFHLVGDKGEPGLKG
LAGKPGEKGNRGIPGFPGIKGLSGLPGPPGPPGPRGEPGSIGNPGEPGPRGTPGSMGNMG
VPGTKGMKGTVGFPGLAGSPGLPGIHGLQGDKGEPGYSEGARPGPPGPXGDPGLPGDXGK
KGERGPPGAPGRSGPAGPEGLPGSPGPPGHPGKSGPGGDLGSKGIKGFPGFPGTKGPPGP
PGLPGNPGPVGERGNQGLDGIPGPAGEKGETGLLGAPPGPRGKPGPQGTKGDRGAPGLPG
LPGRKGPVGDXGPPGPIGVTGPQGAPGFPGVTIPGQKGDRGPPGSXGNPGMPGPPGPPGS
PVEGIKGDKGLMGEPGQRGPPGAXGDMGSPGHPGAPGVPGQPGARGDPGFYGFPGMKGEK
GNSGFPGPPGPPGQXGPKGPPGVRGEPGTVKIISLPGSPGPPGSAGEPGMQGEPGPPGPP
GDPGPCGPKGKPGEDGPPGTPGPTGEKGNKGSKGEQGPPGSDGLPGLKGKPGDTGPPAAG
AVMRGFVFTRHSQTTAIPSCPEGTEPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTTM
PFLFCNINDVCNFASRNDYSYWLSTPAMIPMDMAPITGRALEPYISRCTVCEGPAIAIAV
HSQTTDIPPCPAGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
TCNYYSNSYSFWLASLDPKRMFRKPIPSTVKAGELENIISRCQVCMKMRP
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgaggaccgcgccgagaccaccggcgctgctgttgacgctcttgctggtgctc
ctggtggcggcgcccacggagggcaagggctgtatctgtaaagacaaaggccagtgcttc
tgtgatggggccaaaggggagaagggggagaaaggcttcccaggaccccctgggcctccy
ggccagaagggatacccaggtcccgaaggcctgcctggaccacagggacccaagggctct
ccaggatctccaggactgactggtgccaaaggcgtgaggggaataactggattaccagga
ttttcaggtcctcctggacttccaggcatcccgggccatcctggaccttatggacttgct
ggtttgccaggatgcaatggttccargggagagccagggttcccaggacttcgggggaca
ccaggctacccaggaataccgggtgtcattggtttgaaaggagaaaagggtgctcctgct
gaaggagaaggtgtaggccttgatggaaaaggtgaccctgggttgccaggagctcctgga
ttccagggtttgccaggccttccaggttttcctggacctgcaggtccacttggccctcca
ggattccttggctttccrggaaccatgggacctccaggacctaagggtcacatgggtgat
aacgtgctaggacagaaaggagagcggggtgtgaaaggattgacaggaccccctggacca
ccaggaacagttattgtgactctaaccggccctgataacagaacggacctcaagggagag
aagggagacctgggagccatgggacagtccggaccccctggaccctcygggccgcctgga
gaatcttatggatcagaaaaaggtgctcctggagaaccaggcycacagggaaagcctgga
aaagatggtgcccctggtttccctggcactgagggagccaaaggagacaggggtttccct
gggttaaggggtgaagatggcattaaggggtggaaaggaaactctggccctccaggattt
cgtggtccaacagaatattatgacgcataccaggaaaarggagatgaaggaattccaggc
ctaccagggcccaagggagctcgtggcccgcagggtcccagtggtccccctggagcccct
ggaagtcctgggtcatcaaggcctggcctccaaggagcccctggagtacccggtgtgaaa
ggaagtaaaggggagcaagggcccccaggaaagactgcagcggggcttccggggtccccc
ggctgtcctggttctccaggtcctatggggttcccaggacctccaggcccaccaggtggt
attgtttttcgcgaaggtccacctggagtcggtggacttccaggccatatagggtctcca
ggtatcccaggagtcggtggacccaaaggggagccaggcctcttgtgtacacagtgtcct
tgtatcccagggtctccaggcccccctggatttccaggcttagaaggcgaaaaaggattc
caaggagaaccaggggcagctggcattaaaggaagcccagggtccccaggaagtgctggt
cttccaggatttccaggattcccaggtgctcagggtcagccaggacttaaaggagaaaaa
ggtgaaacacctcggccagagggagaagtgggtgccccaggggatccaggactccaagga
catcctggaagaaagggcttggatggcattcctggaactccgggagtgaaaggattacca
ggacctaaaggagaaccggccctgagcggtgagaagggggacccaggtcttccaggggat
cctggtatccctgggtccccaggacccataggaccggctggaccatcagactatggacca
cagggagagcctggtccaaagggagcccaaggacttcctggagcccctggaccacctgga
gaagccggtcctgagggagaaactggtgtttcaacaccagtcccagggctcccaggaccc
cctgggcctccaggccgtgctggcccccggggtccacctggtatccctggatccacagga
gaatgtgacctgggtctcccagggcctgatggtgaaccaggaattccagaaattggattc
cccgggcctcctggacctaagggagaccgagggtttccaggagccaaaggatcaccaggt
tgtcctggagaaatgggaaagccaggcttacctggaaagcccggtctcccaggaatcaag
ggagagccaggactagccatgcctggagaacccggagcgccaggtttgccaggagaaaga
ggcagctctggggaamatggagaaattggactccctggacttccgggtctccctggagtt
ccaggaactgggggtcttgatggaccacgaggggatccagggaagcccgggccaccagga
gaaagaggacccccaggaaggtgcacagagggtcccaggggaactcaaggacttccaggc
ttaaatggattgaaagggcaacaaggcagaagaggtgaaacagggccaaagggagaccca
ggtatcccgggcttggataggtcaggatttcctggagaacctggactaccaggaatgcca
ggtcaccgaggggagatgggaccacctggtccaaaaggatatccaggaaacccaggattt
ttagggccaccaggtgaamaaggaataatggggatgatggggtttccaggcaacattggt
cccccagggcctcctgggagcccaggcaccccaggacagaaggggagctttggaattcca
ggagtaaagggcgctagaggacccccaggagcccagggggagcaaggagaaagaggaact
ccygggtctcctcagatattccacttagtgggggacaaaggggagccaggactcaaagga
cttgcaggaaagcctggtgagaaaggaaatagaggcattccagggttcccaggtatmaaa
ggactctcagggcttcctggaccaccaggaccaccaggccccagaggagagcccggcagc
attgggaatcccggtgagccaggaccacgtggcaccccaggaagcatgggaaacatggga
gtgccaggtactaaaggaatgaagggaactgtggggttcccaggtctagctggaagtcca
ggcctcccgggtattcatggtctccaaggagataagggagagccaggttattcagaaggt
gcraggccaggaccaccaggaccamagggagatccaggattgccaggtgacatsggcaag
aaaggcgaaagaggaccacctggcgcacctggacgttcggggcctgctggaccagaggga
cttcctgggagccccggaccccctggccacccagggaaatctggtcctggtggtgatttg
gggtccaaaggaattaaaggcttccctggctttccaggaacaaaaggccctccaggtcct
ccaggattgccaggaaatcctggaccagtgggtgagagaggtaatcaaggacttgatgga
attcctggtccagccggagaaaaaggagaaacaggcttgctgggagcacctccaggtcca
agagggaaacctggtcctcaaggaaccaaaggagacaggggagcgccaggcttgcctggc
ctccctggcaggaaagggccagtgggagatsctgggcctccagggcccattggcgtgaca
ggacctcaaggggcaccaggctttcctggtgtaaccatcccyggccagaaaggagatcga
ggtccacctggctccaraggaaacccaggcatgcctggtcctcctggacctccagggagt
cctgtagaaggcataaaaggagacaaggggttgatgggagagcctggccaaagaggtcca
cctggagctrtaggagacatggggtcaccaggtcatccgggagcaccaggtgtccccggt
cagccaggggccagaggtgatcctggattctatggatttccaggcatgaaaggggagaag
ggtaattcaggatttccaggaccacctggacctccagggcaaaktggaccaaaaggacca
cctggagtacgtggagagcctggcacagtgaagatcatctcccttccaggaagcccaggc
ccacctggttcagctggagaaccagggatgcaaggagaacccgggcccccaggaccacca
ggagatccaggaccctgtgggccaaaaggtaaaccaggggaggatggtccaccaggaact
cctggaccaactggagaaaaaggcaacaaaggttctaaaggagagcaaggaccacctgga
tccgatggcctgccaggcttgaaggggaaacctggagacactggaccacctgcagcaggg
gcagtgatgaggggctttgtctttacccggcacagccagaccacagcgattccctcctgt
ccagaagggacagagccgctctatagtgggttttctcttctctttgtacaaggaaatgaa
caagcccatggacaggacctgggaacacttggcagctgcctgcagcgatttaccacaatg
ccattcttattctgcaatatcaacgatgtatgtaattttgcatctcgaaacgattattca
tactggctgtcaacaccagctatgataccaatggacatggctccaattactggcagggcc
ctggagccttatattagcagatgtacagtctgtgaaggtcctgcaattgccatagctgtt
cacagccaaaccactgatatccccccctgtcctgctggctggatttctctctggaaaggc
ttttctttcatcatgttcacaagtgctggttcggagggtgctgggcaagcactcgcatcc
cccggctcctgcctggaagaattccgagccagtccatttatagaatgtcacggaagagga
acatgtaactactattcaaactcctacagtttctggttggcttcattagaccccaaaaga
atgttcagaaaacctattccatcaactgtgaaagctggggagttagaaaacataataagt
cgctgtcaagtgtgcatgaagatgagaccatga
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