Bos indicus (zebu cattle): 109571537
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Entry
109571537 CDS
T04792
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04360
Axon guidance
biu05017
Spinocerebellar ataxia
biu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
109571537 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
109571537 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
109571537 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
biu04040
]
109571537 (TRPC3)
Ion channels [BR:
biu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109571537 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_3
MFS_4
Motif
Other DBs
NCBI-GeneID:
109571537
NCBI-ProteinID:
XP_019833630
UniProt:
A0A6P5D7A9
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Position
17:37619899..37691664
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AA seq
920 aa
AA seq
DB search
MSSKVRKCKEQARVTFPAPAAEEEDEDEXXXXQRRRRGWRGVNGGLEPRSAPPQRGPRAY
CPPPFSPGPDMSMEESPSLRRKTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAAE
YGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLL
AISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILAA
HCQKYEVVHMLLMKGARIERPHDYFCKCGDCTEKQRHDSFSHSRSRINAYKGLASPAYLS
LSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILN
GDLESADPLEMHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTVAI
KCLVVLVVALGLPFLAIGYWIAPCSRLGKVLRSPFMKFVAHAASFIIFLGLLVFNASDRF
EGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQL
WNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFTYARDK
WLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVF
LAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGY
VLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFS
LVPSPKSFVYFIMRIINFSKCRRRRLQKDIEMGIGNSKSRLNLFTQSNSRVFESHSFNSI
LNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEE
LAILIHKLSEKLSPSVLRCE
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggtcaggaagtgcaaggagcaagcgagggtgaccttccccgcgccggcg
gcggaggaggaggacgaggacgaagnnnnnnnnnngcagcgccgccggaggggctggagg
ggcgtcaacggggggctagagccgcgctcggcgcccccgcagcggggaccgcgcgcctac
tgcccgccgcccttctcgccggggcccgacatgtcaatggaggaaagcccatccctaagg
cgcaagacggtgatgcgggagaagggccggcgccaagccgtccggggaccggccttcatg
ttcaacgaccggggtaccagcctcactgcggaggaggagcgcttcctcgacgccgccgag
tatggcaacatcccggtggtgcgcaagatgctggaggagtccaagacgctgaatgtcaac
tgcgtggactacatgggccagaacgcgctgcagctggcggtgggcaatgagcacctggag
gtgaccgagctgctgctcaagaaggagaacttggcacgcatcggcgacgccctgctgctc
gccatcagcaagggctacgtgcgcatcgtggaggccatcctcaaccaccccgggttcgcg
gccagcaagcgcctaaccctaagcccctgcgagcaggagctgcaggacgacgacttttac
gcttacgacgaggacggcacacgcttctccccggacatcacccccatcatcctggcggcg
cactgccagaagtacgaggtggtgcatatgctgctgatgaagggcgccaggatcgagcgg
ccgcatgactatttctgcaagtgcggggactgcacggaaaagcagaggcacgactctttc
agccactcgcgctcaaggatcaatgcctacaaggggctggccagtccagcttatctgtcc
ttgtctagcgaggaccctgtgctcactgccctggagctcagcaacgagctggccaagctg
gccaacatagagaaggagttcaagaatgactatcggaagctctccatgcaatgcaaagac
ttcgtggtgggtgtgctggatctttgcagagactcagaagaggtagaagccattctgaat
ggagacctggaatcggcagatcctctggaratgcacaggcataaagcttccctgagtcgg
gtcaaacttgccatcaagtatgaagtcaaaaagttcgtggctcaccccaactgccagcag
cagctcttgacaatctggtacgagaacctctcaggcctgcgggaacagacggtagctatc
aagtgtctggtggtgctggtcgtggccttgggccttccgtttcttgccatcggctattgg
atcgcaccttgcagcaggctggggaaagttctgcgaagtccttttatgaagtttgtagca
caygctgcttctttcatcatcttcctgggcctgcttgttttcaatgcctcagacagattt
gaaggaatcaccacattgccaaacatcactgttatcgactatcccaaacagattttcagg
gtgaaaaccacacagttcacttggactgaaatgctcattatggtctgggttcttggaatg
atgtggtctgagtgcaaggagctctggctggaaggacccagggagtacattttgcagttg
tggaatgtcctagactttggcatgctctccatcttcatcgctgctttcackgccagattc
ytggctttccttcaggcaacgaaggcacaacagtatgtggacagttatgttcaagagagt
gacctcagtgaagttacactaccaccagagatacagtatttcacttacgccagagataaa
tggctcccttctgaccctcagatcatatctgaaggcctctatgccatagcwgtagtgctc
agcttttctcgaatcgcctatatcctcccggcaaatgagagcttcggccccttgcagatc
tctctgggaaggactgtgaaggacatattcaagttcatggtcctctttattatggtgttt
cttgcctttatgattggcatgttyatattgtattcttactaccttggggctaaagtcaat
gctgcttttaccactgtagaagaaagtttcaagactttgttttggtcaatatttggattg
tctgaagtcacttctgttgtgctcaagtatgatcacaaattcatagagaatataggatat
gttctatatggaatatataatgtaactatggtcgttgttttgctcaacatgctcattgct
atgattaatagctcatatcaagagattgaggatgacagtgatgtagagtggaagtttgct
cgctcgaaactttggttatcttactttgatgatggaaaaacattacctccacccttcagt
ctagttcctagtccaaagtcatttgtttatttcatcatgcggatcattaacttttccaaa
tgcagaaggagaagactgcagaaggatatagaaatgggaattggtaactcaaagtccagg
ttaaacctcttcactcagtctaactcaagagtttttgaatcacacagttttaacagcatt
ctcaatcagccaacacgttatcagcaaataatgaaaagacttataaagcgatatgttttg
aaagcacaagtagacaaagaaaatgatgaagttaatgaaggtgaattaaaggaaatcaag
caagatatctccagccttcgttatgaacttttggaggacaagagccaagcaactgaggaa
ttagccattctaattcataagctcagtgagaaactgagccccagcgtgctgagatgtgaa
tga
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