Bos indicus (zebu cattle): 109572043
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Entry
109572043 CDS
T04792
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109572043 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109572043 (CNOT3)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109572043 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109572043 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
109572043
NCBI-ProteinID:
XP_019834135
UniProt:
A0A6P5D759
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Position
18:63365864..63380577
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AA seq
745 aa
AA seq
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MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSSQHPQSPAVPPSYPPGPPPAASALSATPGSNGAPAAAAPASALGAKASP
APSHSAGTPAPYAQAVAPPAPSGPPSAQPRPPSAQPGAGSGGGGNSGGGGGAGKQNGATS
YSSVVADSPAXAALSSTGGSSTGSQALGXXPGPHNPPPSTAKEPSATAPVGAGGVAPGSG
NNAGGPSLLVPLPVNPPSSPTPSFSEAKAAGSLLNGPPQFSAAPEIKAPEPLSSLKSMAE
RAAISSGIEDPVPTLHLTERDILLSSTSAPPASAQPPLQLSEVNIPLSLGVCPLGPVPLT
KEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLST
ETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFD
YEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgaccgctgcctcaagaaggtgtccgag
ggcgtggagcaatttgaagatatttggcagaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgatctaaagaaggagattaagaagcttcaacggctgagggac
cagatcaagacatgggtagcgtccaacgagatcaaggacaagaggcagctcatagacaac
cgcaagctcattgagacgcaaatggagcggttcaaagtcgtggagcgagagaccaagacc
aaagcctacagcaaggagggcctgggcctggcgcagaaggtggaccccgcccagaaggag
aaggaggaggtcggccagtggctcacgaacaccatcgacaccctgaacatgcaggtggac
cagtttgagagcgaagtggagtccctgtcggtgcagacgcgcaagaagaagggtgacaag
gatcagaagcaggaccggatcgagggcctgaagcggcacatcgagaagcaccgttaccat
gtgcgtatgctggagaccatcctgcgcatgctggacaatgactccatcctggtggacgcc
atccgcaagatcaaagacgacgtcgagtactatgtggactcgtcccaggaccccgacttc
gaggagaacgagttcctctacgatgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggacgagatcttcaaccagtccagcagc
acgcccacctcgaccacctctagctcgcccatcccgcccagcccggccaactgcaccacg
gaaaactcggaagacgacaagaagaggggccgctcgacagacagtgaagtcagccagtct
ccagccaaaaacggctccaagcccgtccacagcagccagcaccctcagtccccggctgtg
ccgcccagctacccgcccggccccccgcccgccgcctctgccctgagcgccacccctggc
agcaacggggccccagctgcggctgcccccgcgagcgctctgggcgccaaggccagcccg
gcgcccagccacagtgcaggcacccctgccccctacgcacaggctgtggccccgccggcc
cccagtgggccccccagtgcccagccccggccccccagcgcccagcctggggcgggaagt
ggcggcgggggcaacagcggcggaggcgggggcgccggcaagcagaacggtgccaccagt
tacagctcggtggtggcggacagcccggcggakgcagcgctcagcagcacggggggcagc
agcactggcagccaggccctgggnnnnnngcccggcccccacaacccgccccccagcacc
gcgaaggaacccagtgccacagccccagtgggtgccgggggtgtggccccaggctcaggg
aacaacgcagggggacccagcctcctggtgccgctccctgtgaacccccccagctcccca
acgcccagcttcagtgaggccaaggcagctggcagcctgctgaacgggcctccgcagttc
agcgccgcacccgagatcaaggccccygagcccctgagctcgctgaagtctatggcggag
cgtgcggccatcagctctggcatcgaagaccccgtacccacgctgcacctgaccgagcga
gacatcctcctgagcagcacgtcggcacccccggcctcggcccagccccccctgcagctg
tcggaggtgaacatcccgctgtcgctgggcgtgtgtccactgggcccagtgcccctcacc
aaggagcagctctaccagcaggccatggaggaggccgcctggcaccacatgccccacccc
tcggactcggagcgtatccggcagtacctaccccggaacccttgtccgacgcccccctac
caccaccagatgccacccccacactcggacaccgtggagttctaccagcgcctgtccaca
gagacgctcttcttcatcttctactatctggagggcacgaaggcgcagtacctggcagcc
aaggccctgaagaagcagtcctggcggttccacaccaagtacatgatgtggttccagagg
cacgaggagcccaagaccatcacagacgagttcgagcagggcacctacatctactttgac
tacgagaagtggggccagcggaagaaggaaggcttcacctttgagtaccgctacctggag
gaccgggacctccagtga
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