Bos indicus (zebu cattle): 109573368
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Entry
109573368 CDS
T04792
Symbol
HELZ
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109573368 (HELZ)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
109573368 (HELZ)
3'-5' decay
Other 3'-5' decay factors
109573368 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PAM2
PhoH
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_7
AAA_16
Bac_DnaA
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
109573368
NCBI-ProteinID:
XP_019836089
UniProt:
A0A6P5DER2
LinkDB
All DBs
Position
19:complement(64911283..65114000)
Genome browser
AA seq
1876 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALQHCTEALLSLGQYSVADFTGPCPLEIESIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLAKGDGAFQAVLCCMQLKGKLQPVSHILAKSLT
GESLNGMVTKDLTRLKTLLKETETATSNVLSGYHVEDLEEGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQTENKQLSGSYMETLI
EKWMNSLSPEKVLSECVEGVKVEHDPGLSVTVNTKKSHQTWTFALTCKPARMLCRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAPNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEEEYFLHARLEFSFTAKRWDLFXDYCRFEPNETT
DLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNLKV
QLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVPKE
KLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDYDTQVELQFQLNRLPLCE
MHYALDRVKDNGVLFPDITMAPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQLP
PVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGNPQ
ARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLCQL
DLEPGFFTHILLDEAAQAMECETIMPLALATRHTRVVLAGDHMQLSPFVYSEFARERNLH
VSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKEFYPLT
FFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVF
RIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTE
DLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHGIT
FEQIKAQLEALELKKTYVLNPLAPEFIPRALRAQHAGNTNKPQQSPPKGKSLHHTQNDHF
QNDGIVQPNPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVS
IGQPQNQHQEKDQHEQSRNGKSDTNNPGPEINKIRTPEKKPTEAKQIDLESNPQNRSPES
RSGIVYPHPKFHRKDNLTPRHINLPLPAPHAQYAIPGRHFHPLPQLPRPPFPIPQQHALL
NQQQSNLPEQPSPVPAQPSQVAPQLGPPPPQLSPAYPAGPGSAFFNNAVPHRPQSPPAEA
VVPEQQPPPVLQEGHSPLRALAQPGPILPSPLNSFPDESPPGLPMGEALDRMHGSVALET
LRQQHVRLQQWSEHHAYLSQGSLPYPHHHHPHPHLQHLPQPPVGLHQPPVRADWKLPSSA
EDEAETTDSRFQDLLRELSNREQSETRELAEMPPPQSRLLQYRQIQTRSPPAAPSPPSGA
DHSTHFPNFTDSSRDLEVANSPAFPQRLPPPMFSSPFSLPSEHLTPPLKYLAPDGAWTFA
NLQQNHLMGPSFPYGLPPLPHRPPQNPFVQMQTHQPAVGQEPLQPLSSRTVSSSSLPSLE
EYEPRGPGRPLYQRRISSSSVQPCSEEASTPQDSLAQRKELQDHNNQSSFTFSSPESWVN
ATSSTPYQNIPCNGSSRPAQPRELAAPPKTVKAPEEHLKPESLEGSSSFNYSVLQHLGQF
PPLMPNKQIAESASSSSPQSSGGGKPAMSYASALRAPPKPRPPPEQAKKSSDPLSLFQEL
SLGSSAGSNGFYSYFK
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaagtcatgtgaacaagcatgtgaatcactgaagaggcag
gactatgagatggccctccagcactgcacagaggccctcctttctcttggccagtactcc
gtggccgactttacagggccctgtccgctggagatagagagcatcaagatcgagagtctt
ctttatagaattgcctcctttttgcagctgaaaaactatgggcaagctgatgaagattgt
aggcatgtgctgggagaaggactggccaagggagatggcgcctttcaggcagtgctttgc
tgcatgcagcttaaaggaaagctccagcctgtatcccacattcttgccaagtcactgaca
ggagagtccctgaatgggatggtaacaaaagatttgacaaggctaaaaacacttctcaaa
gaaacagagacagcaactagtaacgtcctctctggatatcatgtggaagacttagaggag
ggatcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcgcagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacggttgata
aaattgaaacagcaaactgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattatctcctgagaaagtgctcagtgagtgtgtggaaggagtg
aaggtggagcatgaccccggtctgtctgtcaccgtcaacaccaaaaagtcccaccagacc
tggaccttcgctctcacctgtaagcctgcaagaatgctgtgtcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggagggaagatggccccaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagaagaatattttttacatgcgcggctggaattttctttt
acagctaaacgttgggatctcttctaagactattgtagatttgaacctaatgaaactact
gatttggagaagagccttcttatcagataccaaattcctctctctgctgaccagctgttt
acccagtccgttttagacaaatcattgaccaagaccaactatcagtcacggttgcatgac
cttctttatattgaggagatagcccagtataaggaagtcagcaagttcaatcttaaagtg
cagttgcagattctagcaagcttcatgctcactggagtttctggaggtgcaaagtacgct
cagaatggacaactttttggtcgctttaagcttactgaaactctttctgaagatactttg
gctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagtccctaaagaa
aagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaagaaaaa
acaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaatcttcgg
cctgattacgacacacaggttgaactccagtttcagttaaatcgattacccctctgtgaa
atgcattatgcgctagacagggtcaaggacaatggggttttgtttccagacatcactatg
gctccaaccataccttggagtcccaacaggcaatgggacgaacagttggatcctcggcta
aatgcaaaacagaaagaggctgttctggccattaccaccccactttcaatacagttgcct
cctgtcctcatcatcggcccatacgggacgggcaaaacattcactctagctcaggccgtc
aagcacattctccagcaacaggagaccagcaggattctcatttgcacccattctaatagt
gctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaatccccag
gcaagacctctcagggtatatttcagaaaccgctgggtgaagactgtccacccagttgtg
catcagtactgtttgatctcaagcgcacattccacctttcagatgccacagaaagaagat
attctgaaacaccgagtggtggtggttacattgaacacttcccagtacctctgtcagctg
gacctcgaacctgggttttttactcacatcttgttagacgaggctgcccaggccatggag
tgtgaaaccatcatgcctctggcactagcgactagacacacgcgggttgtcctggctggc
gaccacatgcagctcagtccttttgtttacagcgagtttgccagggagaggaaccttcac
gtgtcgttacttgatcggctctatgagcactaccctgccgagtttccctgtaggatcctc
ctgtgcgagaactaccgttcccacgaagctatcatcaattacacctctgagctcttctat
gagggcaagctgatggccagtggaaagcaaccagcacacaaggagttctatccactaacc
ttctttacagcacgaggggaagatgtacaggagaaaaatagcacagctttttataataat
gcagaggtattcgaagtggtggagcgagtggaagagctgagaaggaagtggccagtagcg
tggggcaagttggatgatggaagtattggtgtggtgactccatatgcagaccaggtgttc
aggatacgcgccgaacttcgaaaaaagaggttatctgacgttaacgtagaaagggtgctc
aatgttcaaggaaagcaattcagagttttgtttcttagcacagtacgtacaaggcatact
tgtaaacataaacagacaccaattaaaaagaaggagcagctgctagaagactccacagag
gacttggattatggctttttgtctaactacaagctcctcaacaccgccatcacaagagca
cagtccctggttgccgtggtgggggaccccatcgctctgtgctccattgggagatgcagg
aaattttgggagcggtttattgccctgtgtcatgaaaacaatagcctgcatggaatcact
tttgaacagatcaaagcgcagctagaggctttagaactaaagaagacatacgtgttgaat
ccactggcacctgaatttataccccgggctctaagagcacagcacgcgggaaacaccaac
aaaccgcagcaatcaccccccaagggraaaagcctccatcatacccagaatgatcatttc
cagaatgatggaattgttcagcccaatcccgtgccatggacaggataccagggcaggttt
gcggttgatcctcgaatcattacacaccaggcagcaatggcctacaacatgaacctctta
cagacacatggacgtgggtctcctattccttatggccttgggcaccacccacctgtcagc
atagggcagccacagaatcagcatcaggagaaggatcaacatgagcaaagtcgcaacggt
aaaagtgatacaaataatcctggacctgaaattaataagattcgaacaccagagaaaaaa
cctacagaagcaaaacagattgatttggaatcaaacccacagaacagaagtcctgaatca
cgttctggcattgtttatccccatcccaaatttcatcgcaaagataatctcaccccaaga
cacataaaccttcctctccctgccccccatgcccagtatgccatccccggtcgtcatttt
catcccctcccccagctcccgagaccacccttcccaattccgcagcagcacgccttgctg
aatcagcagcagagtaacttgcctgaacagccgagccccgtgccagcccagcccagtcag
gtggcccctcagctgggcccgccgccgcctcagctctcccctgcctacccggctggcccc
ggcagcgcgtttttcaataacgcggttccccaccgaccacagtccccgcctgcagaggct
gtggttcccgagcagcagcccccacccgtgctgcaggagggccacagtcccctgcgggcc
ctcgcacagcccggccccatcctgccttcacctctgaacagcttcccggacgagagcccc
ccgggcctgccgatgggggaggctttggatcgtatgcacgggagtgtggctctggaaacc
ctgaggcagcagcatgtgcggctacagcagtggagcgagcaccacgcctatctcagtcag
ggcagcctcccgtacccgcaccatcaccaccctcacccgcacctccagcaccttccccag
ccgcccgttggattgcatcagcccccagtgagagcagactggaaactccccagcagtgcc
gaagatgaagcagaaacaactgactcacggtttcaagacttactcagagaactgtctaat
cgtgagcaaagtgaaacacgggaactagctgaaatgccaccacctcaatcaaggcttttg
caatatagacaaattcagactaggagcccaccagcagccccctcgcccccgtccggcgca
gaccacagcacccactttccaaacttcactgacagcagcagagaccttgaagtggccaac
agcccggcgttcccacagcgcctgccgcccccratgtttagctctcctttctcgttgcca
tctgagcacctcacccctcctctgaaatacctggcgcctgatggagcttggacttttgct
aacttacagcagaatcacctgatggggccgagtttcccctacggcctacctccattgcct
cacaggcccccgcagaaccctttcgtgcaaatgcagacccaccagcccgctgttggccag
gagccgctccagccgctgtcctctcggacagtgtcgtcctcttcgctccccagcttagaa
gagtatgaacccagaggaccgggtcggcccttgtaccaaagaagaatctcatctagctca
gtgcagccttgttctgaagaagcaagcactcctcaagacagtcttgctcagcgtaaagag
cttcaggaccataataaccagtcttctttcaccttttcctccccggagtcctgggtaaac
gccacctcatccaccccctatcagaacattccgtgcaatggatccagcaggccagcccag
cccagagagttggcagctccacccaagaccgtcaaagcccccgaggaacatctgaagcct
gagagccttgaggggtccagttccttcaattacagcgtgctgcagcatctcggccagttc
cccccgctcatgcccaacaagcagatcgccgagtcggccagcagcagcagcccgcagagc
tccgggggcggcaagcctgccatgtcctacgccagcgccctgcgggcccctccaaagccc
aggcccccgcccgagcaggccaagaagagcagcgaccctctgtctctgtttcaagaactc
agcctggggagctcagccggcagcaatggcttttactcctattttaaataa
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integrated database retrieval system
