Bos indicus (zebu cattle): 109573914
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Entry
109573914 CDS
T04792
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109573914 (TNRC6C)
03036 Chromosome and associated proteins [BR:
biu03036
]
109573914 (TNRC6C)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109573914 (TNRC6C)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109573914 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA
RRM_1
RRM_occluded
THOC7
Motif
Other DBs
NCBI-GeneID:
109573914
NCBI-ProteinID:
XP_019837055
UniProt:
A0A6P5DI30
LinkDB
All DBs
Position
19:complement(55629475..55705716)
Genome browser
AA seq
1724 aa
AA seq
DB search
MATGSAQGSFTGQTKKTNGNNGSNGTLVQNPSAQSALGAGGANSNGGAARVWGVAASAGS
GLAHCSLGGGDGKMDNMIGDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVGT
GNPSSICSPVSAIGQNMGTQNGNPAGTLGAWGNLLPQESTGPQTSTSQNVSFSAQPQNLN
TDGPNNTNPLSPSPSPLNAVQTNGLPNWGMAVGMGAIIPPHLQGLPGANGSSVSQVGGGG
GEGIGSSVWGLSPGNPATGNSGSGFSQGNGDTVNSALSAKQNGSSSAVQKEGNGGNNAWD
SGPPAGPGILAWGRGGGSSGVGNLHSGAWGHPSRSTSNGVNGDWGKPPNQHSSSDINGKG
STGWDSPSAGGQNPAAQPGSEHVNSWAKAASSGTSASEGSSDGSGSHHEGSTGRDGAEGR
RRDKGVLEQGHLQLPRSDLDPRVLSNTGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWG
CAATQPSHSGGKNDGSSVNSTNTSSVSGWVSSPPAAAPAHAGWGDSSHKAPNGPGVWGEA
ISSTAVNNAAAAKSGHAWSGTVNQEDKSPTWAEPQKPRSQNWGDGHKPNPAWSAGGGDWA
DSSSVLGHLGEGKKNASGWDADSSRSGSGWNEAPRSGTGGWGNGTNAKVNPGTSWGESLK
PGPQQNWASKPPDSSSSNWGGAASVKQTGTGWIGGPLPVKPKDTSEATGWEEPSPPSIRR
KMEIDDGTSAWGDPSNYNNKTVNMWDRNNPGIQSSASAGAAATATATATSDSASXXXXXX
XXQASAQLSRSPLLGPVSSGWGEMPNVHSKAENSWGESSSPSTLVDNGTAAWGKPPSSGS
GWGDQPTEPALTFGRASAPAAAPALCKPASKSMQEGWGSGGDDANLGASQWEDEDGGMWN
NAASQESPSSCSSWGNAPKKGLQKGMKTSGKQDEAWIMTRLIKQLTDMGFPREPAEEALK
SNNMNLDQAMSALLEKKVDVDKRGLGVTDYNGMVTKPLGCRPPISKESSVDRPTFLDKDG
GLVEEPTTSPFLPSPSLKPPLSNSALPSQALGGIASGLGMQNLNSARQTPSGNLGMFGSS
GAAPARTMQQPPQPPVPPLSSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSP
INPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQEQQVARTITNLQQQIQQH
QRQLAQALLVKPPPPPHLSLHPSAGKSALDSFPPHPQAPGLPELQTKEQQSSSPSTFAPY
PLAGLNPNMNASSMDMTGGLSVKDPSQSQSRLPQWTHPNPMDNLPGAASPLDQNPSKHGA
IPGGLSIGPPAKSSIDDSYGRYDLIQSSESPASPPVAVPHSWSRAKSDSDKISNGSSINW
PPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGSSPPSSQNA
ALPPSSAWPLAASGHSRAFSSLAPAPTVAGKLSDIKSTWSSGSASHTQASLSHELWKVPR
NTTAPTRPPPGLTNPKPSSAWGASPLGWTSSYSSGSAWSTDASGRTSSWLVLRNLTPQID
GSTLRTLCLQHGPLITFHLNLTQGIAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGE
EEVNRFLAQGQALPPTSSWQPSPGTSQTRLGTSGSAHGLVRSDAGHWNAPGLAGKGSSDL
LLGGVPQYSSSLWGPPSSDDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggctacggggagcgcccagggcagcttcactggacagaccaagaagacgaacggcaat
aatggctccaacggcacactggtccaaaacccgtccgctcagagtgcccttggggcgggg
ggagcgaacagtaacggaggtgccgccagagtgtggggcgtagccgccagtgccggctcg
ggcctggctcactgctccctcggcggtggggatgggaaaatggacaacatgatcggagat
gggaggagtcagaactgctggggtgcctccaactccaaygctggcattaatcttaacctt
aatcctaacgccaacccagctgcctggcctgtactcggacacgaaggaactgtggggaca
ggcaacccttccagtatttgcagtccggtcagtgccataggtcagaacatgggcacccag
aatgggaaccccgcgggcactttaggtgcttggggaaacttgctgccgcaagagagcaca
ggaccacagacgtccacttcccagaatgtgtctttcagcgcacaacctcagaaccttaac
actgacgggccaaacaacactaaccccctgagcccttctcctagccctctcaacgcagtg
cagacgaacggactgccgaactggggcatggctgttggcatgggggccatcatcccgccc
cacctgcaaggccttcctggtgctaacggatcgtcagtttctcaagtcggcgggggtggc
ggcgaaggaatcggcagttctgtgtggggactgtccccaggtaacccggccacaggaaac
agcggttccgggttcagtcaggggaatggcgacactgtgaactcagcattaagtgctaag
cagaacggctccagcagcgctgtgcagaaggaggggaacggagggaacaacgcgtgggac
tcaggacctcccgctggtcctggcatcctcgcctgggggcggggtgggggcagcagtggt
gtgggcaacctccactcgggagcttggggccaccccagccggagcacctccaacggggtg
aacggggactgggggaagccccccaaccagcattccagtagcgacatcaacgggaaagga
tcaacagggtgggacagtcctagcgctggcggccagaatcctgccgcgcagcctggcagc
gagcacgtgaactcttgggccaaagctgcgtcctctggaacgtcggccagtgaaggcagc
agcgacggttctggcagccaccacgaagggagcactgggcgggatggagcagaaggccga
cggcgagacaaaggggttctcgagcaagggcacctccaattgccaaggagcgacctggac
ccaagagttctgtccaacactggttggggacagacgccagtgaagcaaaacactgcctgg
gaatttgaagagtcccccaggtccgagcgcaagaacgacaatgggacagaggcctggggg
tgtgcagctactcagccttcacactcaggggggaagaacgatgggtccagcgtgaacagt
acaaatacctcttcagtatcggggtgggtcagctcaccgcctgctgctgcgccagcgcac
gccggctggggagacagcagccacaaagcgccaaatggccccggggtttggggggaggcg
ataagctctactgctgttaataatgctgctgctgccaagagtggccacgcttggagcggg
accgtaaatcaggaggacaagtcccccacctgggctgagcctcagaaacccagatctcag
aactggggagatggacacaagccgaacccagcctggagcgcaggagggggagactgggcg
gattcgtcctcggtcctcggacacctgggggaggggaagaagaacgcctcgggctgggat
gctgacagtagtcggtcagggtctggttggaacgaggctccgaggtcggggaccggtggc
tggggcaatggcacaaacgcgaaggtgaatccagggacaagctggggagagtctctgaag
cccggcccccaacagaactgggcgagcaaacccccagacagcagctcragtaactgggga
ggagccgcttccgtgaaacagacaggaacggggtggatcggggggccgctccccgtcaag
ccgaaggacaccagcgaggccacgggctgggaggagccttccccgccctccatccgacgc
aaaatggaaatcgatgacggtacctcagcttggggcgacccaagcaactacaacaataaa
actgtaaacatgtgggacagaaacaacccgggcatccagagcagcgcctcggccggcgcc
gccgccaccgccaccgccaccgccacgagtgacagcgcgagcnnnnnnnnnnnnnnnnnn
nnnnnncaggccagcgcccagctcagccgatcgccactgctcggcccagtttcgtcgggc
tggggagaaatgcctaacgttcattcgaaggctgaaaactcttggggggagtcatcatcc
ccgtccaccctggttgataatggcacagcagcatggggcaagccacccagcagcggcagc
ggatggggggaccagcccaccgagccggcgctgacattcgggagggccagcgcccccgct
gccgccccagccctgtgcaaaccagcttcaaaatctatgcaagaaggctggggcagcggc
ggggacgacgcgaacctcggcgccagtcagtgggaggacgaggacgggggcatgtggaac
aacgcggcttcgcaggagagcccctcttcctgcagctcttgggggaacgctcccaagaaa
gggctccagaagggcatgaaaacatctggcaagcaggacgaggcctggatcatgacccgg
ctgatcaaacaactcacagacatgggcttcccgagagagccggctgaagaggccttgaag
agcaacaacatgaatctcgatcaggccatgagcgctctgctggaaaagaaggtggacgtg
gacaagcgtggactgggagtgaccgactacaacgggatggtcaccaagccccttggctgc
cgcccaccratctccaaagagtcttccgtggaccgccccaccttccttgacaaggatggc
ggcctcgtggaagagcccacgacttcaccatttttgccttcaccaagcctgaagcccccc
ctttccaacagtgcactccccagccaggccctgggcgggattgcctcagggctgggcatg
caaaacttgaattctgctagacagacaccgagtggcaatctgggcatgtttggcagcagc
ggagcagcgcccgccaggaccatgcagcagccgccgcagccgcccgtgccgcccctgagc
tcctcccagcccagtctccgtgctcaagtgcctcagtttctatcccctcaggttcaagca
cagcttttgcagtttgcagcaaaaaacattggtctcaaccctgcactattaacctcgcca
attaatcctcagcatatgacgatgttgaaccagctctatcagctgcagctggcataccaa
cgtttacagatccagcagcagatgctacaggcccagcggaacgtttccggacccatgaga
caacaggagcagcaagttgcgcgcacaatcactaacctgcagcagcagatccagcagcac
cagcgccagctggcccaggccctgcttgtgaagccgccgcccccgccgcacctgtctctg
cacccctctgcaggcaaatcggccctggacagcttccccccccacccccaggcccccggc
ctccctgagctgcaaaccaaagagcagcagtcttcttcacccagcaccttcgccccctac
cctctcgctggactgaacccaaacatgaacgccagcagcatggacatgaccggtggtttg
tcagtgaaggacccatctcagtcccagtcgcgcctccctcagtggactcaccccaacccg
atggataacttacccggtgctgcttctccgctcgaccagaaccccagcaagcatggtgct
atccctggaggtctgagcatcggaccaccagccaagtcctccattgacgactcctatggc
cggtacgatttaatccagagcagcgagtcaccagccagccctcctgtagctgttccccat
agctggtcacgtgccaaatccgacagtgataaaatctcaaacggctccagcatcaactgg
cccccagaattccatcctggtgttccmtggaaaggacttcagaacatagatccggagaat
gaccccgacgtcactcctggaagtgtccccaccgggcccaccatcaacaccaccatacag
gatgtcaaccgctacctcctcaagagtggagggtcctccccaccgtcatctcagaacgcc
gcgctgcctccctcgagtgcctggccgctcgctgcctccggccacagtcgcgctttcagc
agccttgcgcccgctcctactgttgcaggtaagctgtcagacatcaaatcgacgtggtcc
tctggctctgcctcccacacgcaagcctctctgtctcacgaactgtggaaggtgcccaga
aacactactgcacccacaaggcccccgccagggctaaccaaccccaagccttcctctgcc
tggggagccagtcccctcggctggaccagctcttactcctcgggttccgcctggagtacc
gacgcctcaggaaggacaagcagctggctcgttctccgcaacctcacaccccagatcgac
ggctccaccctgcggacgctgtgcctgcagcacgggcccctcatcacrttccacctgaac
ctgacgcagggcatcgccgtggtccgctacagctccaaggaggaagccgccaaggcccag
aagtccctgcacatgtgtgttctgggaaacactaccatcttggccgagttcgccggcgaa
gaagaagtgaaccgtttcttagcccaaggccaagcactgccacccacctccagctggcag
cccagcccagggaccagccagacgcggctgggcacctcgggcagcgcccacggcctggtg
cggagcgacgccggccactggaatgccccggggctggccggcaaagggagcagcgacctg
ctgttgggcggggtcccccagtactcgagcagcctgtggggcccccccagcagcgacgac
ggcagggtcatcggaagccccaccccgctgaacacgttgctccctggcgaccttctcagt
ggggagtccatctag
DBGET
integrated database retrieval system
