Bos indicus (zebu cattle): 109575166
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Entry
109575166 CDS
T04792
Symbol
WHAMM
Name
(RefSeq) LOW QUALITY PROTEIN: WASP homolog-associated protein with actin, membranes and microtubules
KO
K20479
WASP homolog-associated protein with actin, membranes and microtubules
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109575166 (WHAMM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109575166 (WHAMM)
Membrane trafficking [BR:
biu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
109575166 (WHAMM)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
109575166 (WHAMM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
Motif
Other DBs
NCBI-GeneID:
109575166
NCBI-ProteinID:
XP_019838763
UniProt:
A0A6P5DKG9
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Position
21:22820851..22839028
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AA seq
732 aa
AA seq
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MEDEQPDSLEGWVPVREDLFAEPERHQLRFLVAWNDVEGKFAVTCHDRTAQRRRWREGSQ
AGPEPAPEPEAAAPPPSWAGLLSAAGLRGAHRQLAALWPPLDCAADCESTREFRERALRA
RRDEASARLRQLLQGHEKANTMVALMNVYREEDEAYQELVTATTMFFQYLLQPFRDMREL
ATSCKLAILKSLDEDDLGPKRIVALQKEAQEWTRQAEEAIVSIQDITVNYFEKTVEALAG
MKKQMAQDEKRFGQAAWATATPRLEKLKLMLAREALQLMRAKELCLNHRRAEIRGKXXDL
PEQEKKINIVDDLEIQYYEVQLELYEVKFEILKYEEILLVTQLDSIKRLIKDKQDEVIYY
DPCESPEELTVMDGVMGLQEGKQLEVGVLSRQCQQLESKRGSICARRARLRNRKDQCKEN
HRLRLQQAEERIKYSHQHHSVQRKRDKKKEEEQKKREWINQERQKTLQRLRAFKERCPGQ
PXLKSSRSQPVTPDLPNGLPKQTPXPTSQMTAVIHPSSRKTRXAPLSEVSTVKTPEREDC
XGDSPVPTLVPXGDQTHSTSSEELLPPPLPPXXPATSSPPPPPLPAQPFSSQPANHRNLR
FGTSVKDDQPLPLVCESPTENPRGPADSFSGPGSMDEVLASLRHGRAPPQKVQAPALPPP
RASVNEHILAAIRQGVKLKKVHPAPGPSPSSKPTSDLEKSIKAALQRIKRVSADSEEEGE
EGDEQGPHEWDH
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagcagcccgacagcttggagggctgggtaccggtccgcgaggacctcttc
gctgagcccgagcggcaccagctgcgcttcctggtagcctggaatgatgtggagggcaag
ttcgccgtgacttgtcacgaccgcacggcgcagcggcggcggtggcgcgaagggagccag
gcggggcccgaacccgcgcccgagcccgaggctgccgcgcccccgcccagttgggcgggc
ctgctctcggccgccgggctccgcggcgcgcaccgtcagctggcagcgctgtggccgccg
ctggactgcgcggccgactgcgagagcacgcgagaattccgggagcgagccctgcgcgcg
cggcgcgatgaggcgagcgcgcggctgcgccagttgcttcaagggcatgaaaaagccaac
accatggtagcattaatgaatgtgtatcgagaggaagatgaagcgtaccaggaattagtt
actgcgacaaccatgttctttcaatatttactgcagccattcagggacatgcgagaactt
gcaacttcatgtaagcttgctattttgaagtccttggatgaagatgatctaggtcctaaa
aggatagttgccctgcagaaggaagcccaagaatggaccagacaggctgaagaagctata
gtctctattcaagatattacagtgaattattttgaaaaaacggtagaagcattagcagga
atgaagaaacagatggcacaggatgagaagagattcggccaggctgcctgggccacagca
actcccaggttggaaaaactcaagctgatgttagcccgggaggctctacaactcatgaga
gccaaagagctgtgtttaaatcacagaagagctgaaattcggggcaagatnnnngatctt
ccagaacaagaaaaaaaaataaacattgtagatgacttagaaatacaatattatgaagtt
caattagaattatacgaggttaaatttgagatattaaaatatgaagaaatactgcttgtt
acacagttggactccattaaaagacttataaaagataaacaggatgaagtgatctactac
gacccgtgtgaaagcccagaggaacttacggtcatggatggtgtaatggggctacaggaa
gggaagcagctggaggtgggggtgctcagccggcagtgccagcagctggagtcaaagcgg
ggcagcatctgtgccaggagagcccgtctcaggaacagaaaggatcaatgcaaagaaaat
catcgactcagattgcaacaggctgaagaaagaataaaatattctcatcagcaccacagt
gttcagaggaaaagagacaagaaaaaagaggaggaacaaaagaaaagagaatggataaac
caagaacgccaaaaaaccctccaacgattaagagcatttaaagagagatgtccaggccag
cctrtcctaaagagctctcgctcacaacctgtgactccagacctgccgaatggactaccc
aagcagacacccscaccgacttctcagatgacagccgtgatccatccatcctctaggaaa
accagargtgctcccttgtctgaagtcagtactgtgaaaacccctgagcgtgaagactgt
rctggagacagccctgtcccgactttggttccanctggtgaccaaacacattccacgtca
agtgaggaactgctgccgccgccgctgcctccnnnnnnncccgccacctcctccccacca
ccaccgcccctccctgctcagcccttttcttctcaacctgcaaatcatcggaatttacgc
ttcgggacttcagtgaaagatgatcagccacttccactagtgtgtgaatcacccactgag
aacccacgtggtcccgcagacagttttagtggcccagggtcgatggacgaagtgctggcc
tccctaaggcatggcagggcccctccccagaaggtgcaggcgcccgcgttgccccctccc
cgagcctcagtcaacgagcacattctggctgccataaggcagggggtcaaactgaagaag
gtccaccctgcccctggcccgagccccagcagtaaacccaccagcgacctggagaagagc
atcaaggcagcactgcagagaatcaagagggtgtctgctgactcggaggaagagggggag
gaaggcgatgaacagggcccccacgagtgggatcattag
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