Bos indicus (zebu cattle): 109575826
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Entry
109575826 CDS
T04792
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein
KO
K12200
programmed cell death 6-interacting protein
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03250
Viral life cycle - HIV-1
biu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109575826 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109575826 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
biu04131
]
109575826 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
biu04147
]
109575826 (PDCD6IP)
Membrane trafficking [BR:
biu04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
109575826 (PDCD6IP)
Exosome [BR:
biu04147
]
Exosomal proteins
Proteins found in most exosomes
109575826 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
CCDC93_N
DUF792
Ly49
Motif
Other DBs
NCBI-GeneID:
109575826
NCBI-ProteinID:
XP_019839642
UniProt:
A0A6P5DRI9
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Position
22:8054565..8126493
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AA seq
901 aa
AA seq
DB search
MAAFISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQCSRGDRPTCRAVFGTWGSFPDD
ARKKTKYTVXYESYLFMSPQSRETKAKINKFALFFRYYDQICSIEPKFPFSENQICLTFT
WKDAFDKGSLFGGSVKLALASLGYEKSCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQ
FASGAFLHIKETVLSALNREPTVDISPDTVGTLSLIMLAQAQEVFFLKAKRDKMKDAIIA
KLANQAADYFGDAFKQCQYKDTLPKEVFPVLAAKPCIMQAYAEYHQSILAKQQKKFGEEI
ARLQHAAELIKTVASRYDEYVNVKEFSDKISRALTAAKKDNDFIYHDRVPDLKDLDPIGK
ATLVKSTPVNVPISQKFTDLFEKMVPVSVQQSLAAYNQRKADLVNRSIAQMREATTLANG
VLASLNLPAAIEDLSGDTVPQSILTKSTSVIEQGGIQTVDQLFKELPELLQRNREILDES
LRLLDEEEATDNDLRAKFKERWQRTPSNELYKPLRAEGNNFRITLDKAVHADGQVKERYQ
AHRDTIVLLCKPEPELNAAIPSANPAKTMQGSEVVNVLKSLLTNLDEVKKEREGLENDLK
SVNFDMTSKFLTALAQDGVINEEAISVTELDRIYGGLTTKVQESLKKQEDLLKNIQVSHQ
EFSKMKQSNNEANLREEVLKNLAAAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSDI
VFARKTERDELLKDLQQSIAREPSAPSIPTPTYQSSPAGGHAPTPPTPAPRTMPPTKPQP
PARPPPPVLPANRTPASAPAAALAPAPAPAGSGTTVPAPSQTPGSAPLPQAQGPPYPTYP
GYPGYCQMPMPMGYNPYAYGQYNMPYPPVYHQSPGQAPYPGPQQPSYPFPQPPQQSYYPQ
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttcatctcggtacagctgaaaaagacctcggaggtggacctggccaagccg
ctggtgaagttcatccagcagacgtacccgagcggcggggaggagcaggcccagtgttcc
cggggagacaggcccacttgtcgagcggtatttggaacctgggggtcttttcccgacgat
gcacggaagaaaacaaaatacactgttkgatatgagtcatatctttttatgtctcctcag
tcaagggaaacaaaagcaaaaataaacaaatttgctctctttttcagatactatgatcag
atctgttccattgaacccaaatttccattttctgaaaaccagatctgcttgacatttacc
tggaaggatgcttttgataaaggttcactttttggaggatcggtaaaattggctcttgca
agcttaggatatgaaaagagctgtgtgttgttcaattgtgcagccttagctagccagatt
gcagcagaacagaacctggataatgatgaaggattgaaaatcgctgctaaacattatcag
tttgctagtggtgcctttttacacattaaagagaccgttttatctgccttgaatagagag
cccactgtggacatatctccagacactgttgggaccctcagccttatcatgctggcccag
gcccaagaagtgttttttttaaaagccaaaagagataaaatgaaagatgccatcatagct
aaattggctaatcaggctgcagattattttggtgatgcttttaaacaatgtcaatacaaa
gatactctccccaaggaggtgttccctgtcctggctgcaaagccctgtatcatgcaggcc
tatgctgagtaccaccagtctatcctggcaaaacagcagaagaaatttggagaagagatt
gcacggctacagcatgcagcagaattgataaaaacagtggcatctcgctatgatgaatac
gtcaacgtgaaggaattctctgacaaaatcagccgtgcccttactgcggcaaagaaggat
aatgacttcatctatcatgatcgagttccagaccttaaagatctggaccctattggcaaa
gccacacttgtgaaatctactccagtcaacgtacccatcagccagaaattcactgatctg
ttcgagaagatggttcctgtgtcagtccagcagtctttggctgcctataatcagaggaaa
gctgatttagttaacagatcaattgctcagatgagagaagccaccactttggcaaatggg
gtgttagcttcccttaatcttccagcagcaattgaagatttatctggagataccgtacct
cagtctatattgaccaagtccacatctgtgattgaacagggaggcatccagaccgttgat
cagttgttcaaagagctacccgaacttcttcaaagaaatagagaaatcctcgacgagtca
ttaaggttgttggatgaagaagaagcgactgacaatgatttaagggcaaaattcaaggaa
cgttggcaaaggacgccatccaatgaactttataagcctttaagagcagagggaaacaac
ttcagaatcactttggataaagctgtgcacgcagatggacaggtgaaggagcgttaccag
gctcaccgagacaccattgtgcttctgtgcaagccggagccggagctgaacgccgccatc
ccttctgctaacccggcgaagacaatgcagggcagtgaggtggtgaatgtcttaaaatcc
ttattgacaaatcttgatgaagtaaagaaggaaagagaggggctggagaacgacctgaaa
tcagtgaattttgacatgacaagcaagtttctgactgctctggctcaagatggtgtgata
aacgaagaagctatttctgttactgaactggatcgaatctatgggggtctcacaactaaa
gtccaggaatctctaaagaaacaggaagatcttcttaaaaatattcaggtctcacaccag
gaattttcaaaaatgaaacaatctaacaacgaagccaatttaagagaagaagtcttgaag
aatttagctgctgcgtatgacaactttgttgaacttgtggctaatttgaaggagggcaca
aagttttacaatgagctgactgaaatacttgtcaggttccagaacaaatgcagtgatata
gtgtttgcacggaagacagaaagggatgaactcttaaaggacttgcaacaaagcattgcc
agagaacctagtgctccttcaatcccaacacccacataccagtcctctccagctgggggg
cacgcaccaacgccaccaactccagcaccaagaaccatgccgcctactaagccccagccc
ccagcccgrcctccacctcctgtgctgccagcaaatcgaactcctgcttcagctccggct
gcagctctagctccagccccggctccggcaggctctgggaccactgtaccagctccatca
cagactcccggttcagctcccctgcctcaggcccagggacccccgtaccccacctatcca
gggtatcccgggtattgccaaatgcccatgcccatgggctacaatccttatgcgtatggc
cagtataatatgccgtatccaccagtgtatcaccagagccctgggcaggctccatacccg
ggaccccagcagccttcataccccttccctcagcccccacagcagtcttactatccacag
cagtaa
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