Bos indicus (zebu cattle): 109576194
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Entry
109576194 CDS
T04792
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4 isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
biu01002
]
109576194 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
biu04121
]
109576194 (USP4)
Enzymes [BR:
biu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109576194 (USP4)
Peptidases and inhibitors [BR:
biu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109576194 (USP4)
Ubiquitin system [BR:
biu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109576194 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Motif
Other DBs
NCBI-GeneID:
109576194
NCBI-ProteinID:
XP_019840239
UniProt:
A0A6P5DQW4
LinkDB
All DBs
Position
22:51738964..51778745
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AA seq
963 aa
AA seq
DB search
MAEGGGYRERPDAETQKSELGALMRTTLQRGAQWYLIDSRWFKQWKKYVGFDSWDMYNVG
EHNLYPGPIDNSGLFSDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVEGQQPIVRK
VVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKLFNIPAERE
TRLWNKYMSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNEDGTWPRQTQQSKSSTAPSRN
FTTSPKSSASPYSSVSASPIANGDSTNTSGMHSSGVSRGGSGFSASYNCQESPLTHVQPG
LCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIK
QMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLEL
KDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLP
LPLKKDRVMEIFLVPADPRCRPTQYRVVVPLMGAVSDLCEALSKLSGIAAENMVVTDVYN
HRFHKIFQMDEGLNHIMPRDDIFVYEVCSTSPDGSECVTLPVYFRERKSRPSSTSTGAVL
YGQPLLVSVPKHKLTLESLYQAVCERISRYIKQPLPDESGSSPLELGACNGSRSGCAGED
EEEMEHQEEGREQLSETEGSGDDEPGSDHGEATQKKNKGRPCPRRLFTFSLVNSYGTADI
NSLATDGKLLKLNSRSTLAIDWDSETRSCYYNEQESETYEKHVSMLQPQKKKKTAVALRD
CIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDT
VVEFPVRGLNMSEFVCDPSARPYVYDLIAVSNHYGAMGVGHYTAYAKNKLNGKWYYFDDS
NVSLACEDQIVTKAAYVLFYQRRDDEFHKTPSLSFPGSSDGGARPSSSQQGTGDDETYSM
DTN
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggcggagggtaccgtgagcgaccggatgcggagacccagaaatccgagctc
ggggccttgatgaggaccactctccagcgaggggcgcagtggtatcttattgacagccgg
tggttcaagcagtggaagaagtacgtgggcttcgacagctgggatatgtacaatgtgggt
gaacataatctgtatcctggcccgatagataactccggactcttttcagatcctgagagt
cagaccttaaaggaacatttaattgatgaattggactatgttttggtcccagcagaggcc
tggaataagttactaaactggtatggctgcgtagaaggccagcagcccattgtcagaaaa
gtggtagaacatggcctgtttgtcaagcactgcaaggtggaggtatatttgctggaactg
aagctttgtgagaacagtgaccccaccaacgtgctgagctgccatttcagcaaggcagac
accatcgcaaccatcgagaaggagatgaggaagctcttcaacatccctgcagagcgtgag
acacggctgtggaacaaatacatgagcaacacctacgagcagctgagcaagctggacaac
actgtgcaggatgccgggctgtaccagggtcaggtgctagtaattgagccccaaaatgaa
gatggcacatggccaaggcagacccagcaatcaaaatcaagcactgcgcctagcagaaat
tttactacctctccaaaatcatcagcaagtccctattcctcagtgtctgcctctcccatt
gcaaatggtgatagcactaacacctcggggatgcacagctccggtgtcagcaggggtgga
tctggcttctctgcttcgtataattgtcaggagtccccattgactcacgtccaacctggg
ctctgcggacttggaaacctggggaacacctgcttcatgaactccgctttgcagtgctta
agcaacacagcaccgttgactgactactttctcaaagatgaatacgaagccgaaatcaac
agggacaaccccctgggaatgaaaggggaaattgcagaggcctacgcagagctcattaag
cagatgtggtctggcagggatgctcacgtggcacctcgaatgttcaagactcaggtggga
cgttttgcccctcagttttctggctaccaacaacaagactctcaggagcttttagccttt
cttctagatggcttgcatgaagatctgaaccgtgtgaagaaaaaaccctacctagagctg
aaggatgccaatgggcggccagatgcggtggtggcaaaggaagcctgggagaatcatagg
ttgaggaatgattctgtgattgtggacacgttccatggcctcttcaaatctacattggtt
tgcccagaatgtgctaaggtttctgtgacctttgacccattttgctatctaactctccca
ttgcccttgaagaaagaccgagttatggagatcttcctagttcctgccgaccctcgctgc
aggcctacccagtaccgtgtggttgtgccactgatgggggccgtgtccgacctgtgtgag
gctctctccaagctgtctggcattgctgcagaaaacatggtggtcacagatgtgtataat
caccggttccacaagattttccaaatggatgaaggtttaaaccacatcatgcctcgggat
gacatttttgtgtacgaagtctgcagcacctccccggatggctctgagtgtgtcacgctt
cccgtgtacttcagggagaggaaatctaggccgtcgagcacttctaccggggcagtgctg
tacgggcagccactgctggtttctgtccccaagcacaagctcaccctcgagtctttgtac
caggcggtttgtgagcgcatcagccgatacataaaacagcctttgcctgatgagtcaggc
agctctcccttggagctgggagcctgcaatggctccaggagcggctgtgcaggtgaagat
gaagaagaaatggagcatcaggaagaaggcagagagcagctctcagaaacggagggcagt
ggggacgatgagccgggaagtgaccacggtgaggccacccaaaagaagaacaaaggccgg
ccttgccccagaaggctttttaccttcagcctcgtgaactcctatggcacagctgacata
aattcccttgccactgatgggaaactactgaaactcaactctcggtccacgctagccatc
gactgggacagtgagacccggagctgttactacaacgaacaggaatctgagacgtacgag
aagcacgtcagcatgttgcaacctcagaagaaaaagaagacggcggtggccctgagggac
tgcatcgagctctttactaccatggagacccttggggaacatgacccctggtactgtccc
aactgtaagaagcaccagcaggccacaaagaagtttgacctgtggtccttgccgaagatc
ctggtggtccacctcaaacgtttctcctacaatagatactggagggataagcttgataca
gtcgtggagttcccagtcagaggtctgaacatgtcggagtttgtctgtgacccgtcagcg
aggccatatgtgtacgatctcatcgccgtgtccaatcactatggagccatgggggttggc
cactacactgcgtacgcgaagaacaaactgaacgggaagtggtattactttgatgatagc
aatgtgtccctggcctgtgaggatcagatagtgacgaaagcagcttacgtgctgttctac
cagcgtcgagacgatgagtttcataagacgccgtcactcagttttcctggctcttctgat
ggaggtgcaagaccaagcagctcacagcagggcacgggggatgacgagacttacagcatg
gacaccaactga
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