Bos indicus (zebu cattle): 109576220
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Entry
109576220 CDS
T04792
Symbol
DCP1A
Name
(RefSeq) mRNA-decapping enzyme 1A
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109576220 (DCP1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109576220 (DCP1A)
03036 Chromosome and associated proteins [BR:
biu03036
]
109576220 (DCP1A)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109576220 (DCP1A)
mRNA degradation factors
5'-3' decay
Decapping complex
109576220 (DCP1A)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109576220 (DCP1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
109576220
NCBI-ProteinID:
XP_019840310
UniProt:
A0A6P5DT91
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All DBs
Position
22:48733910..48778197
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AA seq
579 aa
AA seq
DB search
MESLSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS
ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK
LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISS
PGLQPSTQISNLGSTETLEETPSGLQDKSAPSGHKHLTVEELFGTSLSKEQPAVVGLDSE
EVEKLPGDASQKEPNSFLPFSFEPGGAPQSENLGVHPAAHPSVQPEVTTPVLITPASITQ
SSEKQAPSYAIPLHSVLSPSLPAEASTGQAPPSLPRKTTMMQTVKTAPRQRSPLLSQPVP
ELSHASLTASQSPFRAPLSVTNTTSPSLPSVDLLQKLRLTPQHDQIQPQSLGKGAAAPSF
SPAAGQLATPESFIEPSPKATAARAPASLSNMVLAPLQSMQQNQDPEVFAQPKVLSSAIP
VASSPLVPATTSAAPSVLLSPSVFQQTVTRSSDLERKASSPSPLTVGTTENQRKPSIILS
KSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNRDNHNL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgctgagtcgagctgggcaagagatgagcttagcggccctgaagcaacaygac
ccctacatcaccagcatcgcagacctcacgggccaggtcgcactgtacaccttctgcccc
aaggccaaccagtgggagaagactgatatagaagggaccttatttgtatatcgaaggtca
gcttcaccttaccatggtttcaccattgtgaatcgactgaatatgcacaatctagttgaa
ccagtaaayaaagatttggaatttcagctccacgaaccatttcttctgtatagaaatgca
agtttgtcaatatacagtatctggttttatgacaagaacgactgtcaccgcatagccaaa
ctcatggccgatgtggtagaagaggagacacggcggtcccagcaagcagctcgggataag
cagagtcccagccaggccaatggctgcagtgaccacaggcccatcgacatcctggagatg
ctaagcagagccaaggatgagtacgagaggaatcagatgggcgactcaaatatctccagc
cctgggctgcagccaagtactcagatctccaatctgggaagcactgagacgctagaagag
acaccatctgggttgcaagataagtctgctccatctggacacaaacatctgacagtggaa
gaattatttggaacctctttgtcaaaggaacagccagcagttgtgggtctggattcagaa
gaagtggagaagctgccaggagatgcctcccagaaagagcccaactcattcctaccattt
tcctttgagcctggcggggcaccccagtcagaaaacctgggtgtccatcctgctgcccac
ccctcagtccagcccgaagtcaccaccccggtgctaatcactcctgcttccatcactcag
tccagtgaaaagcaggcccccagctatgccatcccattgcactctgtgctcagtcccagt
ctaccagcagaagcttctactggacaggctccccccagcctaccccgaaaaaccaccatg
atgcaaacagtgaagaccgcgcctaggcagaggtctccactcctgagtcagcctgtccct
gagctgagccacgccagcctgactgccagccagagcccattcagggccccgctgagcgtg
acaaacacaaccagtccgtctctcccaagtgttgatcttctccagaaactcaggttgacc
ccacagcatgaccaaatacagccacagtcactcgggaaaggtgcagcggcacccagcttt
tcgccagcagccggccagctggccacgcctgagagcttcatagagccttcccctaaagcg
acagcagcgagagccccagcctccctgagcaacatggtgcttgctccccttcagtctatg
cagcaaaaccaggatcctgaagtttttgcccagcctaaggtgttatccagtgccatcccg
gtggcaagctcccctctggttcccgcaacaacctcggcagcgccctcagtcctgctgtcc
cccagtgttttccagcagacagttacaaggtcctcagaccttgagaggaaagccagctcc
ccttctcctctcaccgtcgggacgacagaaaatcagagaaagccttccatcatcctcagc
aagtctcagctccaggatacattaatacatctaatcaagaatgattccagcttcctcagc
acacttcatgaagtctacttacaggttctgaccaagaacagagacaaccacaacctatga
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