KEGG   Bos indicus (zebu cattle): 109577052
Entry
109577052         CDS       T04792                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
biu  Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:biu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:biu03400]
    109577052 (MDC1)
DNA repair and recombination proteins [BR:biu03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    109577052 (MDC1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 BRCT
Other DBs
NCBI-GeneID: 109577052
NCBI-ProteinID: XP_019841339
UniProt: A0A6P5DTU5
LinkDB
Position
23:28184794..28195562
AA seq 1813 aa
MSHRLRDRELILFADLPCQYHRLDVPRPFVSRGPLTVEETPRVQGGTQPPRLLLAEDSEE
EVDSLLDKCVVKGPRTSSLATVVPESDEEGPSPAPDGPGPPSAFNLNSDTDEEESQESGA
GEASSAPRRGTAAETEQPKPVTAEIQIEKDQCSVKERNRDTEIERDVKNGVVPTGVILER
SQPSGEDSDTDVSDESGPPRRLAGVRPKRAWSCNFIDSDTDGEDKGIPAAPAVVPMKERQ
IFHEAGTQSPQAPGVACRQESPADGDTDIEEGEAPLDRSQASMVIDSNTDDEEEVSAALT
LARLRESQAGKWNRDPXAEEDRAQPVALLERSQASARGDSDTDVEEEGLPVGRRGMVPKG
HMDREYSKKSQHPPRDSDTEGKKDESSPGVHLERSQASAQVEDEVPLGPAVALPEKHQVQ
GIVWTHHTDAEAEGGPAQLPVLRLEEARPPLAGDCELDAENTSSAAAGVRKSQLPAEKDA
GTTXAAAIPEQDRTLATRTQGGSSXAPGEQDLLPVSRENLANLVVDTGTPREPQPQREGA
QTTTGREKEPHGNRATDSGESLHDSEDLDLPATQCFADRENQSLEAPSMEDEPTQAFLFT
LPQEPGPSCCSSQATGSLNEAWEVLATQPFCPREYEASETQTAVTLLDTRASCPPPSRTA
QQEQHPESPVHAEALGMEGRGMQTVEKDMGTQRETAERVIPEGGPPQNETKKLPSEGERE
DVTGEEELIGGIQGREQNQVLARDTQSQESDKTVKSASTGRGMEIVKLETETPKETQEKE
REKQTLAGEIFESEAGKLVAERESEVGGLEVKGPQELLDRGPQMRETEAGGQDQKXQASG
PPSEPGAGAGDLQGFTSDPVASGSQXGGGRGAPGSPRRQQRGDLNFEMPPAEKASRGDQE
SPDACLPPAAPEASAALPNSLISQXQKHPAPQSLLFPSPAPLELPIPRTRRNESQEAPET
PFSSELNSVHPEPKVRPQGSSPVSSLPLEPHPATPTGQPIALEPTSGVSGSGTHSSFDVT
ASSVVPTALALQPSTSTDQPVTPKPTLGAPRGRAQRSSVKTPEPSVRIDQPIAPELTAKA
TRGRAQRSSVKTPKPDNSTTPKPQPSTSTDQPVTPKPTSQAPRGRTPKSSAKTPEPAVPT
ASELQPAAPKDQPVAPELTSRATRGRTQRSSIKTSKPDTSTAPKPQPSTSTDQPVTPKPT
SRASRGRTPRSSTKTPEPVVSTASELQPSALTDQPITPELTSRATRGRAQRSSVKTPDPV
TTTTPELQPSTXTDQLVTPKRPSRAPRGRTRRSSAKTPEPVVPTASELQPSAPADQPVGP
WATQCRRHRSSVKTPEPVVPTVPEPQPSTSKDQSVAPEPTSQATQSQTHRSSVKTSQPTE
PTAPDLKPSSPTDQPVTPKVIAQGGPSRTRRASTASAVLVPTTPEFQSPVRSEQPLSPDP
IPEVNCSLRPRATRKHGSPTAHVHEPCTTPPEPNSRSSRNQTHGAMKAAKPLSTIXEPAF
AQLPEAPPHTPQMPKEEAADGSGFTPEPQPRASQNRKRPSATAHSPPLQKRLQRGRVPQK
AASLKEEENPAVRPRKEEGVVIPGPGKRRREQTEEESQGRPSRSLRRTKPVQESTAPKVL
FTGVVDARGERTVLALGGSLASSVAEASHLVTDRIRRTVKFLCALGRGIPILSLAWLHES
RKAGCFLPPDEYLVTDPEQEKNFGFSLREALSRARERRLLEGYEIHVTPGVQPPPPQMGE
IINCCGGAILPSMPRSYKPQRVVITCSQDFPRCAVPYRVGLPVLSPEFLLTGVLKQEVKP
EAFAFSTVEMSST
NT seq 5442 nt   +upstreamnt  +downstreamnt
atgagtcatcgtttgcgggaccgggagttgattctctttgctgacttgccctgccagtac
catcgcttggatgtcccccggccttttgtctctcggggccctctaactgtagaggagaca
cccagggtacagggaggaactcaaccccccaggcttctgttggctgaggactcagaggaa
gaagtagattcccttttggacaagtgtgtggtgaaaggaccaaggacctcctctttggca
acagtcgttccagagagtgatgaagaagggccttcccctgccccagatgggcccgggcca
ccttctgccttcaacttgaacagcgacacagatgaggaagaaagtcaggaatcaggagca
ggggaggcctcttcagctcccagaagaggtaccgctgcagagacagaacagcctaaacct
gtcacagccgaaatccagattgagaaggatcagtgttccgtgaaggagaggaacagggac
acagaaatcgagagggatgtgaagaatggggtggttccgactggagtgattctggagagg
agccagccttctggggaggacagtgacacagatgtgagtgatgagagtgggcctccaaga
aggcttgctggggtccgtccgaaaagggcctggtcttgtaacttcatagacagtgatact
gatggggaggacaaggggatccctgctgccccagcagtggttcccatgaaggagaggcag
atcttccacgaagctggtacacagagcccccaggcacctggtgtggcatgtcggcaggag
agcccagctgatggtgatacagatatagaggagggagaggcccccctggacagaagccaa
gcctccatggtgatcgacagcaatacagacgatgaggaagaagtctcggcagcactgaca
ctggcacgtctaagagagagccaggctggtaagtggaaccgagatccagrtgcagaagag
gacagggcccaaccagtggcccttctggagcgaagccaggcctctgctaggggagacagt
gacacagatgtggaggaagaggggctcccagtgggaaggaggggaatggttcccaagggt
cacatggacagggaatattcaaaaaagagccagcatcctcccagggacagtgatacagag
gggaagaaagatgagagctctccgggggtccacctggagagaagccaggcctctgcacaa
gtggaggacgaggtcccactggggccagctgttgcacttccggagaaacatcaggtacaa
ggcatagtgtggacacatcacaccgatgcggaggcagaagggggcccggcacagctcccc
gtgctgcgtctagaggaagcccggcctcctctagctggggactgtgagctggatgcggag
aacacatcctcagcagcagctggtgtcagaaagagccagcttccggcggaaaaagatgct
gggaccacgtgrgccgcagccattcctgaacaggacagaacacttgccaccaggacccag
ggtgggtcatccayggcaccaggggagcaggaccttctcccggtctcaagggaaaaccta
gcaaatctggtggtggatacaggcactccacgggagccccagccacagagagagggggcc
cagaccaccacaggaagggagaaagaaccacatgggaatagggccacagactctggagag
agcctccatgattctgaagatctggacctaccagctacccagtgctttgcagacagagag
aatcagagcctggaagcccccagcatggaggatgagcccacccaggccttcctgtttact
ctgccccargagcctggcccttcctgttgcagctcccaggccacaggttccctgaatgag
gcatgggaggtcttggcgacacagccattctgtccgagagagtatgaggcctccgagacc
caaaccgctgtcaccctccttgacacccgtgcatcttgcccccctccatctaggacagca
cagcaagagcaacatccagagagcccagtccatgcagaagcactggggatggaaggcaga
gggatgcagactgtggagaaagacatgggtacccaaagagaaacagcagagagggtgatc
cctgagggagggccaccgcagaatgaaaccaagaaactgccctcggaaggagagagggaa
gatgtgacgggagaggaagaattaatcggggggatacagggtagagaacaaaatcaggtg
ttagctagagatactcagagccaagaatctgacaaaacagtgaaaagtgcaagtactgga
aggggaatggagattgtaaagttagaaactgagacacccaaggaaacacaggagaaagag
agagaaaagcagactctcgcaggggaaatatttgagagtgaagcagggaaactggtagca
gagagagagagtgaggtaggtgggttagaagtcaagggaccccaagagctactggacaga
ggcccacagatgagggagacagaggcggggggccaggaccagaaagkccaagcctctggt
ccgccatcagagcctggagcaggggcaggagaccttcagggatttacttcagatccagta
gcttctgggagccaggmaggtggaggaaggggagccccagggagccccaggaggcagcag
agaggtgacttgaatttcgagatgccacctgctgagaaggcttccaggggtgatcaggaa
tccccagatgcttgtctgcctcctgcagcgcctgaagcctcagccgcactcccaaactcc
ctcatctctcagatscaaaaacatcccgcacctcagtccctcctttttccctctccagct
cctttagaactgcctattcccaggaccagacgaaatgagagtcaggaagctccagagact
cccttctcctcagagctgaactctgtccacccagaacccaaagtcaggccccaggggtcc
tctccagtttcttctctaccccttgagccccaccctgccacccccacaggccarcctatt
gcccttgaacccacatctggsgtctctgggagcgggacacatagttcctttgatgtaact
gcctcatcagttgtccccacagcccttgcactgcagccatccacctccacagaccagcct
gtcacccctaagcccacacttggggcccctcggggcagggcacagaggtcttctgtcaaa
acccctgaacccagtgtccgcatagaccagcctattgcccctgagctcacagctaaggcc
actcggggcagggcacagaggtcttctgtcaagactcccaaaccagataactccacaaca
cccaagccccagccttccacttccacagaccagcctgtcacccccaagcccacatctcag
gcccctcggggcaggacacctaagtcttctgccaagactcctgaaccagctgtccccaca
gcctctgagctccagcctgctgcccctaaagaccagcctgttgctcctgagctcacatct
agagccactcggggcaggacacagaggtcttctatcaagacttccaaaccagatacgtcc
acagccccsaagccccagccttccacttccacagaccagcctgtcacccccaaacccacg
tctcgggcctctcgaggcaggacacctaggtcttccaccaagactcctgaaccagttgtc
tccacagcctctgagctccagccttctgccctcacagaccagcctatcactcctgagctc
acatctagggctactcggggcagggcacagagatcctctgtcaaaacccctgatccagtt
accaccacaacacctgagctccagccttccaccyccacagaccagcttgtcacccccaaa
cgcccatctcgggcccctcgaggcaggacacgtaggtcgtctgccaagactcctgaacca
gttgttcccacagcctctgagctccagccttctgcccctgcagaccagcctgttggtcct
tgggccactcagtgtagaagacataggtcttctgtcaagaccccrgaaccagttgtcccc
acagtccctgaacctcagccttctacttctaaagaccagtctgtcgctcctgaacccaca
tctcaggccactcagagccaaacacataggtcttctgtcaagacatcccagccaactgaa
cccacagcccctgacctcaaaccttcctcccccacagaccagcctgtcactcccaaggtc
atagctcagggtggtccaagcaggacacgaagggcttctacagcaagtgctgtgctggtt
cctactacccctgaattccagtctccagtccgctcagaacagcctctttcccctgacccc
atccccgaagtcaactgcagcctgaggccgagggccactaggaaacatgggtctcccaca
gctcatgttcatgagccctgcaccacaccccctgaacctaactcycgctcctcaaggaac
caaacacatggggcaatgaaggcagccaagccccttagcaccattyctgagcctgccttt
gcccagctccctgaggcaccgcctcacactccccagatgccaaaggaggaggcagctgat
gggtcaggcttcaccccagagccccagcctagggcctctcaaaaccgcaagaggccttca
gctactgcacattcacctccacttcaaaaacggctccagagagggagagtccctcagaag
gcagcatcccttaaggaagaagaaaatccagcagtaaggccgaggaaggaagagggtgta
gtgattccaggtccaggcaagagaaggagagagcagacagaggaagagtcccagggaaga
ccgagccgtagcctgcgacggaccaaacctgtccaggagtccacggcccccaaagtgctc
ttcacgggcgtggtggatgctcgcggagagaggacggtgctggccctggggggcagtctg
gccagctcagtggctgaggcttctcacctggtgactgatcggatccgccgtacggtcaag
tttctgtgtgccctgggccggggcatccccatcctctccctggcctggctgcatgagtcc
cgcaaggcaggctgcttcttgcccccggacgaatatttggtgactgatcctgagcaggag
aagaacttcggcttcagccttcgggaggccctgagccgagctcgggagcgaaggctgctg
gagggctatgagattcacgtgacccccggagtccagccaccgccacctcagatgggagaa
atcatcaactgctgtggaggcgccatcctgcccagcatgccycggtcctacaagcctcag
agggtcgtgatcacatgttcccaggacttccctcgatgtgccgttccatatcgggttggg
ctgcctgtcctctcacccgagttcctgctgacgggagtactraagcaggaagtcaagcca
gaggcctttgccttctccactgtggaaatgtcatccacctga

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