Bos indicus (zebu cattle): 109577237
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Entry
109577237 CDS
T04792
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109577237 (TRERF1)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
109577237 (TRERF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
zf-C2H2_2
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
109577237
NCBI-ProteinID:
XP_019841652
UniProt:
A0A6P5DTD6
LinkDB
All DBs
Position
23:complement(16515987..16725033)
Genome browser
AA seq
1201 aa
AA seq
DB search
MGDQQLYKTNHVAHGGENLFYQQPPLGVHGGLNHSYGNTVPGAGMDAPQASPISPHFPQD
TRDGLGLAVGSKNLGQVDTSRQGGWGGHAGPGNHVQLRGNLTNSNMMWGAPAQAEPTDGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGAPDSA
LRQLLSQKPMEAPAAALPSRYQQASQQPHPGFTGGLSKPALQVGQHPSQGHLYYDYQQPL
AQMPVQGGQSLQAPQMLSQHMQQLQPHQYYPPQQQTHAGQQRVSMQEMQPPPQQQIRPPQ
PQPQPQPRQGSMQIPQYYQSPPMIQPLPEPQQPQMHLQPSSYHRDPHQYTPEQAHAVQLI
QLGSMPQYYYQEPQQPYGHPVYQQSHLPQHQQPEDGQPKTYPGDRQAQAMLSSHGDLGPP
DTGMGDAASSDLNRASSALPHRPLLSPGSIHLNNMGSQHQQLSPSAVWPQMHLPDGRAQP
GSPESSGQPKGVFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRASPSLKQEEGE
KAPAPPPQPQPPLPPPPPPPQLPPEAESLTPMVMPVSVPVKLLPPKPSSQGFANSVAAAP
SARDKPASSMSDDEMPVLEIPKKHQPGAAKAEEALRSAPAEKKKFRHRPEPLFIPPPPSY
TPNLAASHSGATLYQSQLRSPRVXGDHLLLDPAHELPPYTPPPMLSPVRQGSGLFSNVLI
AGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSNLTVTPGPGEQTVDVEPRINIGLRFQA
EIPELQDVSALAQDTHRATLVWKPWPELENHDLQQRVENLLNLCCSSALPGGGTNSEFAL
HSLFEAKGDVMAALEMLLLRKPVRLKCHPLANYHYAGSDKWTSLERKLFNKALATYSKDF
IFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLSEIIDDCVTSEEDEEVEEEEDPEE
DRKSTREEESELPKSPEPPQGPVLAPAEGPPLQALGQPSGSFICEMPNCGADCRCHVTPF
LPQVFSSRQALNGHARIHGGTNQVTKARGTVPSGKQKPGSAQSGYCSVKSSPSHSTTSGE
TDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAFAAEMAATIERTTGPV
GPQGLLPLDQLSLIKPIKDVDLLDDDVVQQLGGVMAEAEVVDTGLLLDDQASVLLQGDTE
L
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccagcagctatacaagaccaatcatgtggcccacggtggtgagaaccttttc
taccaacagccaccacttggcgtccacggcgggctgaaccacagctatgggaatacagtg
cccggggctggaatggatgcccctcaggcatcacccatctccccccacttccctcaagac
actcgggatggtctaggcttggctgttggctccaaaaaccttggccaagtggatacctcg
aggcagggagggtggggaggccaygcagggcctggaaaccatgtccagctacgtggaaac
ctgaccaattcgaacatgatgtggggggcgccggcccaggcggagcccaccgatggctac
cagtacacctactcgcaggccagcgagatccggacccagaagctcaccagcggtgtcctg
cacaagctagactctttcacccaggtgtttgccaaccaaaacctgcgaattcaggtcaac
aatatggcccaggtgctgcacacccagtcagcagtaatggatggagcgcccgacagcgcc
ctccgccagttgctgtcccagaagcccatggaggccccagcagcggctctcccgtcscgc
taccagcaggcgtcccagcagcctcaccctggtttcactggtgggctgtccaaaccggct
ctccaggtcgggcagcacccgagccaagggcacctgtattacgactaccagcagccgctg
gcccaaatgccggtgcagggcggacagtcgctgcaggccccccagatgctatcycagcac
atgcagcagctgcagccgcatcagtattacccrccgcagcaacagacacacgccgggcaa
cagcgggtgtccatgcaagaaatgcagccgccrccacaacagcagattcgcccgccacag
ccccagccgcagccgcagccgcggcagggttcaatgcagatacctcagtattaccagtcc
ccacccatgatacagcctttgccagagccgcagcagccccagatgcacctacagccctct
tcttatcatagggacccccatcaatacaccccagagcaggcgcaygcagtccagctgatt
cagctgggctccatgccccagtactactaccaggagccccagcagccctacggccacccc
gtgtaccagcagagccacctgcctcagcaccagcagcctgaggatggtcagcccaagact
tatccaggcgacaggcaggcccaggccatgctgagctcycacggggacctgggacctcca
gatacaggaatgggagacgcagccagctccgacctgaaccgggccagcagtgccctcccr
caccggccgctcctgtcccctggcagcatccacctcaacaacatggggtctcagcaccag
cagctgtctcccagtgccgtgtggccccagatgcacctacctgatggccgagcccagcca
gggtctcctgagtcaagtggccaacccaaaggagtgtttggggagcagtttgatgccaag
aacaagctgacatgctccatctgcctgaaggagttcaagagcctgcccgccctgaatggc
cacatgcggtcccatggggggatgagggcctcccccagcctcaaacaggaggaaggagag
aaggccccggcgcctccgcctcagccccagccgccactgccgcctccgccgccgccacct
cagctccctcccgaggcggaaagcctcacgcctatggtcatgcccgtgtctgtccctgtc
aagcttctcccgcccaagcccagctctcagggcttcgccaacagcgtcgctgccgccccc
tcggccagagacaagccagccagctcgatgtcggacgacgagatgcccgtgctcgaaatt
cccaagaagcaccagccaggcgcggccaaagccgaggaagccctcaggagcgcgccagca
gagaagaagaagttccggcaccggccggagccgctcttcatcccgccaccgccctcctac
acgcccaacctcgccgcctcgcactcgggcgccaccctgtaccagagccagctgcgctcc
ccacgggtnntgggcgaccacctgctcctggaccccgcccacgagctgcccccctacacg
cccccgcccatgctcagcccggtgcgccagggctcggggctcttcagcaacgtgctcatc
gccggccacggccccggcgcccacccgcagctgcccctcacgcccctgacgcccacgccg
cgcgtgctgctctgccgctccaacagcatcgatggcagcaacctgacggtcaccccgggg
cctggagagcagaccgttgatgtcgaaccacgcatcaacattggcttgcgattccaagcg
gagatcccagaactccaggatgtctctgccctggcccaggacacacacagggccacacta
gtatggaagccctggccagagctggaaaaccacgacctccagcaaagagtggagaatctc
ctgaatttatgctgttcaagtgcgttgccaggtggagggaccaattctgaatttgctttg
cactctctcttcgaggccaaaggtgatgtgatggctgctctggaaatgctgctgttgcgg
aaaccagtcaggttaaaatgtcatcctttagcaaattaccactatgccggttcggacaag
tggacctccctagaaagaaaactgtttaataaagcactagccacttacagcaaagacttt
atttttgtacagaagatggtgaagtccaagacggtggctcagtgtgtggagtactattac
acgtggaaaaaaatcatgaggttggggaggaaacaccggacacggctctcagaaatcatc
gatgactgtgtgacgagtgaagaagatgaagaggtagaggaggaggaggatccggaagaa
gacaggaaatccacaagagaagaggagagtgaattgcccaagtccccggagccgccgcaa
ggcccggtcctggctcccgcagaggggccgcccctgcaggccctgggccagccctcgggc
tccttcatctgtgaaatgcccaactgcggggcggactgtagatgtcatgtcactcccttt
cttccccaggtgttcagctcccggcaggcactgaacggccacgcccgcatccatggtggc
accaaccaggtgaccaaagctcggggcactgttccctctgggaagcagaagcctggcagt
gcccagagtgggtactgctcggtgaagagctcaccctcccacagcaccaccagcggcgag
acagaccccaccaccatcttcccctgcaaagagtgcggcaaagtcttcttcaagatcaaa
agccgaaatgcacacatgaaaactcacagacagcaggaggaacagcagaggcagaaagcg
cagaaggcggcgttcgcggccgagatggcagccacaatcgagaggactacggggccggtg
gggccgcaggggctgctgcccctggaccagctgagtctgatcaaacccatcaaggacgtg
gacctcctcgatgacgacgtcgtccagcagctaggaggcgtcatggcagaggccgaggtt
gtggacaccggtctcctcctggatgatcaggcttcagttttgcttcagggtgacacggaa
ctctaa
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