KEGG   Bos indicus (zebu cattle): 109577863
Entry
109577863         CDS       T04792                                 
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
  KO
K15623  protein SSXT
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu03082  ATP-dependent chromatin remodeling
biu05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:biu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    109577863 (SS18)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    109577863 (SS18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:biu03036]
    109577863 (SS18)
Chromosome and associated proteins [BR:biu03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    109577863 (SS18)
   GBAF(ncBAF) complex
    109577863 (SS18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 109577863
NCBI-ProteinID: XP_019842346
UniProt: A0A6P5DVL3
LinkDB
Position
24:31761965..31839547
AA seq 417 aa
MSVAFAAPRQRGXGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMSPSGPPPPPRAHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHIPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMSMQPNQGPVMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMSQVNQ
GNHMLGQRQIPPYRPPQQGPPQQYSGQEDYYGEQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQYPGQQGYPGQ
QQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgtccgtggcgttcgcggccccgaggcagcgcggcawgggggagatcactcccgccgcg
attcagaagatgctggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcaacagatgttgcataccaacttggtctac
cttgctacaatagcagattctaatcagaacatgcagtctctcttaccagcaccacccaca
cagaatatgcctatgggtcccggagggatgagtccgagcggccctcccccacctccgcgc
gctcacaacatgccttcagatggaatggtaggtgggggtcctccggcaccacacatgcag
aaccagatgaacggccagatgcctgggcccaaccatatccctatgcagggacctggaccc
aatcaacttaatatgacaaacagttccatgaacatgccttcaagtagccacgggtccatg
ggaggttacaaccattccgtgccgtcatcccagagcatgccggtacagaaccagatgacc
atgagtcaaggacagcccatgggaaactacggccccagaccaaatatgagtatgcagcca
aaccaaggtccagtgatgcaccagcagcctccttctcaacagtacaacatgccccaggga
ggtgggcagcattaccaaggccagcagccaccaatgggaatgatgagtcaagttaaccaa
ggcaatcatatgctgggtcagaggcagatccctccctatagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaacaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcagtattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaattcgcagtatggccaacagcaagatgcctaccaaggaccacct
ccccagcagggctacccaccccagcagcagtacccagggcagcaaggctacccaggacag
cagcagggctacggtccttcacagggtggcccaggtcctcagtatcctaactacccacag
ggacaaggtcagcagtatgggggttacagaccggcacagcctggacccccacagccacca
cagcagaggccttatgggtacgaccaggggcagtatggaaactaccagcaatga

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