Bos indicus (zebu cattle): 109577863
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Entry
109577863 CDS
T04792
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03082
ATP-dependent chromatin remodeling
biu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109577863 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
109577863 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109577863 (SS18)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109577863 (SS18)
GBAF(ncBAF) complex
109577863 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
109577863
NCBI-ProteinID:
XP_019842346
UniProt:
A0A6P5DVL3
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Position
24:31761965..31839547
Genome browser
AA seq
417 aa
AA seq
DB search
MSVAFAAPRQRGXGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMSPSGPPPPPRAHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHIPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMSMQPNQGPVMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMSQVNQ
GNHMLGQRQIPPYRPPQQGPPQQYSGQEDYYGEQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQYPGQQGYPGQ
QQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcgttcgcggccccgaggcagcgcggcawgggggagatcactcccgccgcg
attcagaagatgctggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcaacagatgttgcataccaacttggtctac
cttgctacaatagcagattctaatcagaacatgcagtctctcttaccagcaccacccaca
cagaatatgcctatgggtcccggagggatgagtccgagcggccctcccccacctccgcgc
gctcacaacatgccttcagatggaatggtaggtgggggtcctccggcaccacacatgcag
aaccagatgaacggccagatgcctgggcccaaccatatccctatgcagggacctggaccc
aatcaacttaatatgacaaacagttccatgaacatgccttcaagtagccacgggtccatg
ggaggttacaaccattccgtgccgtcatcccagagcatgccggtacagaaccagatgacc
atgagtcaaggacagcccatgggaaactacggccccagaccaaatatgagtatgcagcca
aaccaaggtccagtgatgcaccagcagcctccttctcaacagtacaacatgccccaggga
ggtgggcagcattaccaaggccagcagccaccaatgggaatgatgagtcaagttaaccaa
ggcaatcatatgctgggtcagaggcagatccctccctatagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaacaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcagtattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaattcgcagtatggccaacagcaagatgcctaccaaggaccacct
ccccagcagggctacccaccccagcagcagtacccagggcagcaaggctacccaggacag
cagcagggctacggtccttcacagggtggcccaggtcctcagtatcctaactacccacag
ggacaaggtcagcagtatgggggttacagaccggcacagcctggacccccacagccacca
cagcagaggccttatgggtacgaccaggggcagtatggaaactaccagcaatga
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