Bos indicus (zebu cattle): 109578304
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Entry
109578304 CDS
T04792
Symbol
CUX1
Name
(RefSeq) protein CASP isoform X1
KO
K09313
homeobox protein cut-like
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
biu03000
]
109578304 (CUX1)
Transcription factors [BR:
biu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
109578304 (CUX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
ATG17_like
HTH_23
Motif
Other DBs
NCBI-GeneID:
109578304
NCBI-ProteinID:
XP_019842916
UniProt:
A0A6P5DX46
LinkDB
All DBs
Position
25:complement(36850660..37098446)
Genome browser
AA seq
1537 aa
AA seq
DB search
MCKYALLCSECNYNLVFPFCFSQQRELDATATVLANRQDESEQSRKRLIEQSREFKKNTP
EDLRKQVAPLLKSFQGEIDALSKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQ
RLHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAETIALEKEQ
KLQNDFAEKERKLQETQMSTTSKLEEAEHKVQTLQTALEKTRTELFDLKTKYDEEITAKA
DEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRS
SLEAELAAKEREIAQLVEDVQRLQANLSKLRENSASQISQLEQQLSAKNSTLKQLEEKLK
GQADYEEVKKELNILKSMEFAPAEGAGTQDASRPLEVLLLEKNRSLQSENAALRISNSDL
SGSARRKGKDQPESRRPGPLPASPPSQLPRNTGEQASNTNGTHQFSPAGLTQDFFSSSLA
SPSLPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFSTGPYSTNSISSQSPLQQS
PDVNGMAPSPSQSESAGSVSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSV
SEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQSLNRLFQEVP
KRRNGSEGNITTRIRASETGSDEAIKSILEQAKRELQVQKTAEPAQPSSASSGGSADDAI
RSILQQARREMEAQQAALEPALKPAPPSQTDITLLTPKLIPASPMSSVSSYSPLAVSLKK
PPSAPDASAPALPNPPALKKESQDAPGPDLPGAADPTTQGVLRHVKSELGRGTVWKDHWW
SAVQPERKSSAPPEDPKAEDASSSKEKGSGGQTRAERSQLQGPSSSEYWKDWPSAESPYS
QSSELSLTGASRSETPQNSPLPSSPIVPLSKPTKPSVPPLTPEQYEIYMYQEVDTIELTR
QVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGEL
GQGVLPVQGQQQGPVLHSVTSLQDPLQQGCVSSESTPKTSASCSPAPESPMSSSESVKSL
TELVQQPCPPIETSKDSKPPEPSDPPASDSQPATPLPLSGHSALSIQELVAMSPELDTYG
ITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLN
DPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQPCEPPSVGIDYSQGASPQPQHQLKKPRVV
LAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQA
GSQGQAGASDSPSARSGRAAPSSEGDSCDGVEAAEGPGAADAEESGGPAAAAXXXXXXXX
XXXAPEEREEAPRPAEKAEPPPSGTPVPDAAADEGRPRAPPPPPEGPADGPGPVPNPAAA
AAPAAGEDAATSAAPPGEGPCRARDGADRSSALPSTSAPAAARRPSSLQSLFGLPEAAGA
RDSRDNPLRKKKAANLNSIILXLEKAASREEPFEWEF
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaatacgctctcctctgttcagagtgtaattacaatctggtcttccctttttgt
ttctctcaacagagggaactcgatgccaccgcaacagtattggcaaaccggcaagatgaa
agtgagcagtcaagaaagcggcttatcgagcagagccgtgagttcaagaagaacactcca
gaggatttgcgcaagcaggtagcaccgctgctgaagagcttccaaggcgagattgatgca
ctgagtaagagaagcaaagaagctgaggcagccttcttgaatgtctacaagagattgatt
gatgttccagatcccgttcccgcgctggaccttgggcagcagctccagctcaaagtgcag
cgcctgcacgacattgagacagagaaccaaaaacttagggaaactctcgaagaatacaac
aaggaattcgctgaagtaaaaaatcaagaggttacgataaaagcacttaaagagaaaatc
cgagaatatgaacagactctgaagaaccaggctgagaccatagctctcgaaaaggaacaa
aagttacaaaatgattttgcagaaaaggagagaaagctgcaggagacccagatgtccacc
acctcaaagctagaagaagccgaacataaagtccagactctgcaaacagccctggaaaaa
actcgaacagaattatttgacctgaaaaccaaatatgatgaagaaattactgccaaggcc
gacgaaattgaaatgatcatgacggaccttgaaagagcaaaccagagggcagaggtggct
caaagagaggcagagaccttgagggagcagctctcgtcggccaaccactctctccagctg
gcctcccagatccagaaggcgccggacgtggagcaggccatagaggtgctgacccgctcc
agcctggaagctgagttggccgccaaggagcgggagatcgcccagctggtggaggatgtg
cagagactccaggccaacctcagcaagctgcgcgagaactcagccagtcagatctcccag
ctcgagcagcagctgagcgccaagaacagcaccctcaagcaactggaagaaaaactcaag
ggacaggctgactatgaagaggtgaagaaagagctaaacatcctgaagtccatggagttt
gcgccggccgagggagctgggacgcaggacgcatccaggcccctggaggtgctgctgctg
gagaagaaccgctcgctgcagtccgagaacgccgcgctgcgcatctccaacagcgacctg
agcgggtcagccaggagaaaagggaaagaccagcctgagagtcggcgtcctggacctttg
ccggcctcccctccttctcagttgccccgcaacacgggggagcaggcttccaatactaat
ggtacacaccagttctcaccagcggggttaacgcaagactttttcagctcatccctggca
agccccagcctgcccctggcttctacgggaaaatttgcactaaactctctcctccaacga
cagctaatgcagtccttctactccaaggccatgcaggaagcaggaagcacaagcatgatt
ttttcaacaggtccatacagcacaaactccatatcttcccaaagtccattacaacaaagc
ccagatgtaaatggcatggccccatctcccagccagtcagaaagtgctgggagcgtctcc
gagggcgaggagatagacactgcagaaatcgcccggcaggtgaaagagcagctgatcaag
cacaatatcggacagcgcatttttggacactacgtcttgggactgtctcaggggtccgtg
agcgagatcctggcccggcccaagccgtggaacaaactgacrgtgcgtggcaaggagccr
tttcacaagatgaagcagttcctctcagacgagcagaacatcctggctcttcgcagtatc
caaggcagacaaagagagaatccaggccagagcctgaacagactctttcaggaagtaccg
aaacgaagaaatgggtctgaaggtaacatcaccactcggattcgagcctccgagaccggg
tctgacgaagccatcaagtccatcctggaacaagccaagagggagctgcaagtccagaaa
accgcagagccggcccagccttcctcggcatccagtggcgggagcgcggacgacgccatc
cgctccatcctgcagcaggcccgccgggagatggaggcccagcaggccgccctcgagccc
gccttaaagcccgcgccgccgtcccagacagacatcaccctcctgacccccaagctgata
cccgcctcgcccatgtcgtcggtgtccagttactcccctttagccgtctccctgaagaag
cccccctcggctcccgacgccagcgcccctgccctgcccaacccaccagccctgaagaag
gagtcccaggacgcgcccgggccggacctcccgggggcagccgaccccaccacacagggg
gtcttgagacacgtgaagagtgagctcggccgcggcaccgtgtggaaggatcactggtgg
agcgccgtccagcccgagaggaagagcagcgctccgcccgaagaccccaaggccgaagac
gccagcagcagcaaagaaaaaggcagcggcgggcagacgcgggcggagcgcagccagctc
cagggcccctcctcctccgagtactggaaggactggcccagcgcagagtcgccctactcc
cagagctcagagctgagcctgaccggagccagccgcagygagacgccccagaacagccca
ctgccctcctcgcccatcgtgcccctgtcgaagcccaccaagccctcagtcccgccgctg
acccccgagcagtacgagatctacatgtaccaggaggtggacaccatcgagctcacccgg
caggtgaaggagaagctggccaagaacggcatctgtcagaggatcttcggggagaaggtg
ctaggcctgtcacagggcagtgtcagcgacatgctgtcccggccgaagccatggagcaag
ctgacccagaaaggacgagaacccttcatccggatgcagctctggctgaacggcgagctg
ggccagggcgtcctgcccgtccaaggccagcagcaggggccagtcctgcactccgtgacg
tcactacaagaccccctgcagcagggctgcgtgagctcagaaagcactccaaagacctcc
gccagctgcagccctgcacccgagtcacccatgagctccagcgagtcagtgaagagtctg
actgaactggtccagcagccctgcccccccatcgaaaccagtaaggacagcaaacctcca
gaacccagcgacccgcccgcctcagactcccagcccgccaccccactgcctctctccgga
cactcagcgctcagcattcaagagctggtggccatgtctccagagytggacacctacggc
atcaccaagagggtcaaggaggtgttgacygacaacaacctcggtcagcgcttatttggg
gagaccatcctggggctcacccaaggctctgtctctgacctccttgctcgccccaagccc
tggcacaagctcagtctgaagggacgggagccctttgtccggatgcagctgtggctgaat
gaccccaacaatgtggagaagctgatggacatgaaacggatggaaaagaaagcctacatg
aagcggcggcacagctcggtcagcgacagccagccctgtgagcccccgtccgttggcatc
gactacagccagggcgccagcccccagccccagcaccagctgaagaaaccccgagtagtg
ctggcccctgaagagaaagaagctctgaaacgagcatatcagcaaaagccatacccgtca
ccaaaaaccatcgaagaactcgccacccagctcaacttgaaaaccagcactgtcatcaac
tggttccacaattacaggtctcggatccgcagagaactgttcattgaggagattcaggcc
gggagccagggccaggcgggggccagcgattcgccgtcggcccggagcggccgggccgca
cccagctcagaaggcgacagctgcgacggcgtggaggccgccgagggcccgggcgccgcg
gacgccgaagagtcgggcggccccgcggccgccgcgaannnnnnnnnnnnnnnnnnnnnn
nnnnnnnnggccccggaggagcgggaggaggcgccgcggccggcggagaaggcagagccg
ccgccctcggggaccccggtcccggacgccgccgccgacgaaggccggccccgggcgccg
ccgccgccacccgagggtcccgcggacggcccggggcccgtgccaaaccccgccgccgcc
gccgcgcccgcggccggggaggacgccgctacctcagccgccccgcccggcgagggcccc
tgccgggcccgggacggcgccgacaggagttccgctttgccaagcaccagcgcgcccgcg
gccgcccgcagacccagctcgctgcagagcctcttcggcctcccggaggcggcgggcgcc
agggactcgcgagacaaccccttgaggaagaagaaggccgcgaacttgaacagcataatc
ctttwtctggagaaggctgccagccgcgaggagccctttgaatgggagttctga
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integrated database retrieval system
