Bos indicus (zebu cattle): 109578539
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Entry
109578539 CDS
T04792
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu05014
Amyotrophic lateral sclerosis
biu05017
Spinocerebellar ataxia
biu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
109578539 (ATXN2L)
05017 Spinocerebellar ataxia
109578539 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
109578539 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
biu03019
]
109578539 (ATXN2L)
Messenger RNA biogenesis [BR:
biu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109578539 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
Motif
Other DBs
NCBI-GeneID:
109578539
NCBI-ProteinID:
XP_019843408
UniProt:
A0A6P5DYM2
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All DBs
Position
25:complement(27765974..27778063)
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AA seq
1078 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGSLASTSAPPGPPAAASPCLG
PAAAAGSGLRRGAEGILAPQPPAPQQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYN
NSRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKVSEPAGGPRREDI
VDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSD
DYDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQL
AREIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLAAREGKYIPLPQRVREG
PRGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGA
KTLSSPSSRPSGEASVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPMGSAVPTSSASIP
VTSAVGDPGVGSVSPASPKISLAPTDVKELPAKEPGRTLESQELSRIAAKVPGLQNEQKR
FQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLASEPLGSPVSSK
AESVSDKEDKPPLPAAGGAEGPEQPPAPCPSQTGSPPVGLIKGDDKDEGPVAEQVKKSTL
NPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHM
GPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPL
VAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSS
TPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPPSQHAAPSPVQHQA
GQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQLPHGF
TNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSAST
PSPYPYIGHPQGEQPGQAPGFPGGADDRIREFSLAGGIWHGRADGLQVGQDARVLGGE
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgtcgccctcccgggggcaccagcccgcccaacggcggtctcccgggg
tccctggcctccacctcggctcccccaggacctcctgcggccgcctccccctgcctgggg
cctgcagccgctgccgggagcgggctccgccggggagccgagggtatcttggcgcctcaa
ccgccggcaccgcagcagcaacatcaggagaggccaggggcagcggccatcggcagcgcc
aggggacaaagcacaggaaagggacctccacagtcaccggtgtttgagggtgtctacaac
aattccagaatgctgcatttccttaccgctgttgtgggttccacttgtgatgtaaaggtg
aagaacggtaccacctatgagggtatcttcaagacgctgagctcaaagtttgaactggca
gtggacgctgtgcaccggaaggtatcggagccagcgggtggccctcgtcgggaagacata
gtggacaccatggtgtttaagccaagtgatgtcatgcttgtccacttccgaaatgtcgac
ttcaattatgctactaaagataagttcactgactcggccattgccatgaactcgaaggtg
aatggggagcacaaagagaaggtgcttcagcgctgggagggcggtgatagcaacagtgat
gactacgacctggagtctgacatgtctaatggatgggaccccaacgaaatgttcaagttc
aatgaggagaactatggtgtaaagaccacctatgacagcagtctctcttcttacacggtg
cccttagagaaggacaattcagaagaattccgtcagcgggagctgcgtgctgcccagttg
gcccgagagattgaatcgagcccccagtaccgcctgcggatcgccatggagaatgatgat
gggcgcacggaggaggagaagcacagtgcagttcagcgacagggctcagggcgtgagagc
cccagcttggcagccagggagggaaagtatatccctctaccccagcgagttcgggaaggt
ccccggggaggcgttcgctgcagtagttctcggggcggccggcctggccttagctctttg
ccgcctcgtggccctcaccatcttgacaatagcagccctggcccaggttctgaggcacgc
ggtatcaatggaggcccttcccgcatgtcccctaaggcccagcgacctctgagaggtgcc
aagactctgtcttcccccagcagcaggccttctggagaagcctctgttccacctcctcct
gcagtgggccggatgtacccgccgcgctctcccaaatcagctgcccccgccccaatctca
gcttcctgtcctgagcctcccatgggctcagcagtaccaacctcttcagcttccatccca
gtgacatcagcagttggggatcctggagtaggctccgtttccccagcttctccaaagatc
tcactggcccccacagatgtaaaagaactcccggccaaggaacctggaaggacgctggag
tcccaggagttgtcccggattgcagcgaaagtccctggccttcagaatgaacagaagcgt
tttcagctggaagaactgagaaagtttggggcccagtttaagcttcagcccagtagctcc
cctgagaccagcttggatccttttcctccacggatcctgaaagaggaggccaaagggaag
gagaaggaggtggatggtcttttggcttcagagcccctggggtctcctgtttcctcgaag
gccgaatcagtatcggacaaggaggacaaaccgcccctgccagcagcagggggtgccgag
gggccggagcagcctccggcaccttgcccaagccaaactggcagccccccagtgggcctc
atcaagggagatgacaaggatgagggcccagttgctgaacaagtaaagaagtcaacattg
aaccccaatgccaaggagttcaatcccactaagcccctgctctctgtgaataaatccacc
agtactccgacttctcctgggccccggactcattcaactccctccatcccggtgctgaca
gcaggccagagtgggctctatagcccccagtacatttcctacatacctcagatccacatg
ggaccagctgttcaggcaccgcagatgtatccttatcctgtgtccaactcagtgcctgga
cagcagggcaagtaccggggcgccaaaggctccctgcccccccagcgctcggaccaacac
cagccagcctccgcccctcccatgatgcaggctgccgccgccgctgccggtccacctctg
gtggccgccaccccttactcttcctacatcccctacaacccacagcagttcccaggccag
cccgccatgatgcagcccatggcccactatccctcgcagccggtgtttgcccccatgctt
caaagcaacccacgcatgctgacgtcggggagccatccccaggccatcgtgtcatcctcc
acccctcagtacccttctgcagagcagcccaccccccaggccctttatgccaccgttcac
cagtcctatccgcaccatgccacgcagctccatgcccaccagccgcagccggccaccacg
cctactgggagccagccgccgtcccagcatgcggcccccagtcctgtccagcaccaggcg
gggcaggccccacacctgggcagtggacagccgcagcagaacctgtaccacccaggggcc
ctgacaggcacgccgccttctctgccaccgggaccttctgcccagtcccctcagagcagc
ttcccccaaccagccgctgtatatgccatccatgcccaccagcagctgccccacggcttc
accaacatggcccatgttacccaggcccatgtccaaactggaatcacagcagccccgccc
cctcaccctggggctccccacccgccccaggtgatgctgctgcacccrccccagagccat
gggggccccccccaaggcgcggtgccccagagtggggtgcctgcactctcagcttccaca
ccctcaccctatccctacatcggacacccccaaggtgagcagcctggccaggcgcctgga
tttccaggaggagccgatgacaggattcgtgagttctcgttagctgggggtatttggcat
ggaagagctgatgggctgcaggtggggcaggatgcacgggttctgggcggggagtga
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