Bradyrhizobium diazoefficiens USDA 110: blr2428
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Entry
blr2428 CDS
T00109
Symbol
blr2428
Name
(GenBank) ORF_ID:blr2428; putative fatty acid oxidation complex alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00071
Fatty acid degradation
bja00280
Valine, leucine and isoleucine degradation
bja00310
Lysine degradation
bja00362
Benzoate degradation
bja00380
Tryptophan metabolism
bja00410
beta-Alanine metabolism
bja00640
Propanoate metabolism
bja00650
Butanoate metabolism
bja00907
Pinene, camphor and geraniol degradation
bja00930
Caprolactam degradation
bja01100
Metabolic pathways
bja01110
Biosynthesis of secondary metabolites
bja01120
Microbial metabolism in diverse environments
bja01200
Carbon metabolism
bja01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
blr2428 (blr2428)
00650 Butanoate metabolism
blr2428 (blr2428)
09103 Lipid metabolism
00071 Fatty acid degradation
blr2428 (blr2428)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
blr2428 (blr2428)
00310 Lysine degradation
blr2428 (blr2428)
00380 Tryptophan metabolism
blr2428 (blr2428)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
blr2428 (blr2428)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
blr2428 (blr2428)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
blr2428 (blr2428)
00930 Caprolactam degradation
blr2428 (blr2428)
Enzymes [BR:
bja01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
blr2428 (blr2428)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
blr2428 (blr2428)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
blr2428 (blr2428)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
DAO
Pyr_redox_2
NAD_Gly3P_dh_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
BAC47693
UniProt:
Q89SH2
LinkDB
All DBs
Position
2646398..2648545
Genome browser
AA seq
715 aa
AA seq
DB search
MHRRRARRRHADRGGVTMDSRIMTALGDRVLTLGPQPAADSPYKHFKLTRDADGVAWLLF
DRADASANTLSSDVMEEFDAVLAAIETERPAGLVIRSAKPSGFIAGADVNEFRGASDPEM
VETRIRAAHAVVDHLEALRLPTVAVIHGFCLGGGLEIALACQSRIAIEGARFGFPEVMLG
LHPGLGGTARFTALVNPTQSMALMLTGRTIDARRAKSLGLVDTVTQERHVRGAVKDVLFG
RLKRAKPGLLTRAANLGPVRGLLAKRMRSEAAKAAPREHYPAPYALIDLWETHGDSKAAM
LAAEQASFAKLMVTPTAQNLIRVFFLREQMKKAAGAGNAVKHVHVIGAGAMGGDIAAWCA
GQGLRVSLADMKAEPIAGAVKRAAELYGKIIRKPTEVRDALDRLIPDMDGEGVRNADLVI
EAVPEKLELKQKVYAGLEPKMKPGAILATNTSSIPLQDLRTTLARPDRLVGLHFFNPVSR
LQLVEVVSHDGNDAQVLREALAFVGAIDRLPLAVKSSPGFLVNRALTLYMLEAMVMLDEK
IDQRLIDAAAEQFGMPMGPIELADQVGLDICLDVGDMLRTKFGDLLPPTPAWLREKVAKG
ELGRKTGRGFYTWKDGKAEKVPLPETGPRVTDQMIDRLVLPMSNVCVAALREGIVEDPDA
VDGAMIFGTGYAPFRGGPLNYARTRGVDNVVSTLRELADRFGGRFAPDPGWDNLK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggcggcgggctcggcggcgccatgctgatcgaggcggtgtgaccatggattcc
aggatcatgaccgcgctcggcgaccgcgtgctgacgctcgggcctcagcccgcggcagac
agtccatacaagcacttcaagctcacacgcgatgccgacggtgtcgcctggctgctgttc
gatcgcgccgatgcgagcgccaatacgctctcctccgacgtgatggaagagttcgacgcg
gtgctcgccgcgatcgagaccgaacgccccgcaggtctcgtgatccgctcggccaaaccg
tccggcttcatcgccggcgccgacgtcaacgaattccgcggtgccagcgatcccgagatg
gtggagacgcgcatccgcgccgcgcatgccgtcgtcgaccatctggaggccttgaggctg
ccgacggtcgcggtcatccacggcttctgcctcggcggcgggctcgagatcgcgctcgcc
tgccagtcgcgcatcgccatcgagggtgcgcgcttcggcttcccggaggtgatgctcggc
ctgcatcccggtctcggcggcactgcccgtttcacggcgctggtcaatccgacccagtcg
atggccttgatgctgaccggccgtaccatcgatgcgcgccgcgccaaatcgctaggcctc
gtcgacaccgtgacgcaggaacgccacgtccgtggcgccgtgaaagacgtgctgttcggc
cggctgaagcgggccaagcctggcctgctgacgcgggcggccaatctcgggccggtgcgt
ggactgctggccaagcgcatgcgctcggaggcggcgaaggccgcaccgcgcgagcactat
ccggcgccttacgcgctgatcgatctctgggaaacgcatggcgacagcaaagccgcgatg
ctggcggccgagcaggcctcgttcgccaagctgatggtgacgcccaccgcgcagaatctg
atccgcgtcttcttcctgcgcgagcagatgaagaaggcggcaggcgccggcaacgcggtg
aagcatgtccatgtcatcggcgccggcgccatgggcggcgacatcgcagcatggtgtgcg
gggcaggggctgcgggtctcgctcgccgacatgaaggcggagccgatcgcaggggcggtg
aagcgtgcggccgagctttacggcaagatcatccgaaaacccaccgaggtgcgcgacgcg
ctcgatcgcctgattccggacatggacggcgagggcgtccgcaacgccgatctcgtcatc
gaggcggtgccggaaaagctggagctcaagcagaaagtctatgccggtctcgagccgaag
atgaagccgggtgcgattcttgcgaccaacacctcgagcattccgcttcaggacctgcgc
accacgctggcgcggcccgatcggctggtcgggctgcactttttcaatccggtgtcgcgg
ctgcaattggtcgaggtcgtcagccatgacggcaacgatgcacaggtcttgagggaggca
ctcgcctttgtcggtgcgatcgaccgcctgccgctcgccgtgaagagctcgcccggcttc
ctcgtcaaccgcgcgctgacgctctacatgctggaggcaatggtgatgctggacgagaag
atcgaccagcgcctgatcgacgccgcggccgagcagttcggcatgccgatggggccgatc
gagcttgccgaccaggtcgggctcgacatctgcctcgatgtcggcgacatgctgcgcacc
aagttcggcgatctgctgccgccgacgccggcatggctgcgcgagaaggtcgccaaaggc
gagctcggccgcaagaccggcaggggcttctacacctggaaggacggcaaggccgagaag
gtgccgcttcccgagaccggcccgcgcgtgaccgaccagatgatcgaccgcctggtgctg
ccgatgtccaacgtctgcgtcgcggcgctgcgcgagggcattgtcgaggatcccgatgcg
gtcgacggcgccatgatcttcggcacagggtatgcgccgttccgcggcggcccgctgaac
tatgcgcgcacgcgcggcgtggataatgtcgtgtccaccttgcgcgagctcgccgatcgg
ttcggcggtcgtttcgcgcccgatccgggctgggacaatttgaaatag
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