Bradyrhizobium diazoefficiens USDA 110: blr6438
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Entry
blr6438 CDS
T00109
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00470
D-Amino acid metabolism
bja00550
Peptidoglycan biosynthesis
bja01100
Metabolic pathways
bja01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
blr6438 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
blr6438 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
blr6438 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bja01011
]
blr6438 (ddlA)
Enzymes [BR:
bja01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
blr6438 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
bja01011
]
Precursor biosynthesis
Amino acid ligase
blr6438 (ddlA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
BAC51703
UniProt:
Q89GA7
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All DBs
Position
7087712..7088833
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AA seq
373 aa
AA seq
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MADKIRVVVLYGGRSGEHEVSLKSAASVFRHLDRTRFEVIPVSIDKTGRWQWNDLRSLDQ
AHAAALPILPDAPEMRLARGPDGRGVLVPITQGAAAPIAIDVVFPVIHGPLCEDGTVQGL
LELADVAYVGSGVLASAVSMDKDVAKRLAEFAGIPVAPYRVLTRKAFVQDRVSSLAKAVE
GLSLPVFVKPCNMGSSVGIHKVKTQDALEAALDDAFRYDVKVLVQQGIDAREIEVAVLED
ETLFASLASELNPNAHHEFYSYEAKYLDPDGARVDLPARLDAAQMERVRSLATRVFAALE
CSGFARVDFFLDRKTGEFCFNEINTLPGFTSISMYPKMMEASGVPYGELLSRLVDLALDR
HRQRQSLERGYAS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaattcgcgtcgttgttctctatggcggcaggtccggtgagcatgaggtc
tcgctgaaatcggccgcttcggtattcaggcatctcgaccgcacccgcttcgaggtgatc
ccggtctccatcgacaagacgggccggtggcaatggaacgatcttcgttcgctcgatcag
gcgcacgcggcggcgttgccgatcctgcccgatgcgccggagatgcggctcgcgagggga
cccgacggacgcggcgtccttgtgccgatcacgcaaggcgcggccgccccgatcgcgatc
gacgtcgtctttcccgtcatccacgggccgctttgcgaggacggcaccgtgcagggcctg
ctggaattggccgacgtcgcctatgtgggatcgggcgttctcgcctccgccgtcagcatg
gacaaggatgtcgccaagcggctcgctgaattcgccggcattccggtcgcgccctatcgc
gtgctgacccgcaaggccttcgtccaggaccgcgtctcatcgcttgcgaaggcggtcgag
ggtctgagcctcccggttttcgtcaagccgtgcaacatgggctccagcgtcggcatccac
aaggtcaagacgcaggatgcgctcgaagcggcgctcgacgacgcgtttcgctatgacgtc
aaggtgctggtccaacagggcatcgacgcgcgcgagatcgaggtcgcggtgctcgaggac
gagacgctgttcgccagtctcgccagcgagctgaaccccaacgcccatcacgagttctat
tcgtacgaggcaaaatatctcgatcccgatggcgctcgggtcgaccttccggccaggctc
gacgcggcacagatggagcgcgtccggtcactcgcaacccgggtgttcgcggcgctcgaa
tgcagcggcttcgcgcgcgtcgacttcttcctcgaccggaaaaccggcgagttctgcttc
aacgagatcaacaccctgcccggcttcacgtcgatcagcatgtatccgaagatgatggaa
gcgtcgggcgtaccgtatggcgagctgctgagccgcctcgtcgatctggcgctggaccgg
caccggcagcgtcaatcgctggaacggggttacgcgagctag
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