Bradyrhizobium japonicum E109: RN69_22535
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Entry
RN69_22535 CDS
T03509
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bjp
Bradyrhizobium japonicum E109
Pathway
bjp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RN69_22535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bjp03400
]
RN69_22535
Enzymes [BR:
bjp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RN69_22535
DNA repair and recombination proteins [BR:
bjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RN69_22535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF3054
Motif
Other DBs
NCBI-ProteinID:
AJA62804
UniProt:
A0AA87UGX4
LinkDB
All DBs
Position
complement(4742059..4742733)
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AA seq
224 aa
AA seq
DB search
MTTSRSEAARSSRQPLTLVPDRDCPLCPRLVAFREANRAREPLWHNAPVPPFGDIKARLL
IVGLAPGMQGANRTGRPFTGDYAGDLLYATLLEYGFAKGTYQARPDDGLKLVDCRIANAV
HCVPPQNKPLPIEINTCRQFLGATLATMPNLRAIVALGRIAHDTVLKPLKLKASQAPFGH
GAVHQAGAFRLYDSYHCSRYNTNTGVLTTDMFRSVFAKVRADLD
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgacgacttcgaggagtgaggcggcccggtcaagccgccagcctctcaccctcgtcccc
gaccgtgactgtccgctttgtccgcgcctggtcgcctttcgcgaggcgaaccgcgcgcgc
gagccgttgtggcacaacgccccggtcccccccttcggcgacatcaaggcacgcctgctg
atcgttggccttgcaccaggcatgcagggcgccaaccgcaccggccgccccttcaccggc
gactatgccggcgacctgctctacgccacgctgctcgaatacggcttcgccaagggcacc
tatcaggcgcggcccgacgacggcctgaagctggtcgactgccggatcgccaatgccgtg
cattgcgttccgccgcagaacaagccgctgccaatcgagatcaacacctgccgccagttc
ctcggggctaccctcgcgacgatgccgaacttgcgcgccatcgtcgcgctcggacgcatt
gcgcacgacacggtgctcaagccgctgaagctgaaggcctcgcaagctcccttcggccac
ggcgccgtacatcaggccggcgcattcaggctctacgacagctatcattgctcgcgctac
aacacgaacaccggcgtgctgacgacggacatgttccggagcgtgttcgcgaaggtgagg
gccgacctggactag
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