Bradyrhizobium japonicum E109: RN69_40320
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Entry
RN69_40320 CDS
T03509
Name
(GenBank) lytic transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
bjp
Bradyrhizobium japonicum E109
Brite
KEGG Orthology (KO) [BR:
bjp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bjp01011
]
RN69_40320
Enzymes [BR:
bjp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RN69_40320
Peptidoglycan biosynthesis and degradation proteins [BR:
bjp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RN69_40320
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Gene cluster
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_2
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AJA67162
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All DBs
Position
8633788..8635131
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AA seq
447 aa
AA seq
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MTGAMMLATAVLLPVSANAQAQNGLSNLFGGIFSGPNPAPSQAPPGPGGALPWTGEDGAS
GHPLMTAAAIREAAANFNNCVAGMWPDAARRNITQENFQRFTAGLTPDLRIMDLMDSQPE
FTKSIWDYLDILVNDNRLAKGREVLAKYKAQFDATEKATGVDRYIIASIWGIESNYSTQM
GDRSVLQSTATLACIGRRQAYFKDEFLSALEILNRGDLRPEQMRGSWAGAFGPTQFMPTA
FKRFAVDGDGDGRRDVVDNPSDLIASTANNLKKDGWQAGQTWGYEVVVPQGFNYMLADRA
KAMTMAQWEKLGLKRPANQPFPHPAEKAYLLAPAGAQGPGFLMLQNYRVIMKYNPAEAYA
LAIGHFADRLRGGQPFVQPWPRQERELSRTERLELQQLLAQRGFYKGTPDGQFGGQTREA
LRNFQASIGVPADGFASSDVLDRLRGR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcgcaatgatgcttgcgaccgctgtgctgctgcctgtcagcgcgaacgcccag
gcgcagaacggcttgtcgaacctgttcggcggcattttctccggcccgaatccggcgccc
tcgcaagccccgcccggccccggcggcgcgctgccctggaccggcgaggacggcgcctcc
ggtcatccgctgatgacggccgccgcgatccgcgaggcggccgccaacttcaacaattgc
gtcgcggggatgtggcccgatgccgcacgccgcaacatcacgcaggagaatttccagcgc
ttcacggccgggctcacacccgatctacgcatcatggacctgatggattcgcagccggag
ttcaccaagtcgatctgggattatctcgacatcctcgtgaacgacaaccgcctcgccaag
ggtcgcgaggtcctcgccaaatacaaggcgcagttcgacgccaccgaaaaggccaccggc
gtcgaccgctatattatcgcctcgatctggggcatcgagtccaattactcgacgcagatg
ggcgaccgcagcgtgctgcagtcgaccgcgacgctcgcctgcatcggccgccgccaggcc
tatttcaaggacgagtttctctccgcgctggagatcctcaaccgcggcgatctcaggcct
gagcagatgcgcggctcctgggccggtgccttcggcccgacccagttcatgccgaccgcg
ttcaagcgctttgccgtggatggcgatggcgacggacggcgcgacgtcgtcgacaatccc
agtgatctgatcgcctcgaccgccaacaatctgaagaaggacggctggcaggccggccag
acctggggctacgaggtcgtggtgccccagggcttcaactacatgctggccgatcgcgcc
aaggcgatgacgatggcgcagtgggagaagctcgggctcaagcgcccggccaaccagccc
ttcccgcatccggccgagaaagcctatctgctggcgcccgccggggcgcagggcccgggc
ttcctgatgctgcagaattaccgcgtcatcatgaagtacaacccggccgaggcctatgcg
ctggcgatcggccatttcgccgaccgcctgcgcggcggccagcccttcgtgcagccctgg
ccgcggcaggagcgcgagctgtcccgcaccgagcggctggaactccagcagctgctggcc
cagcgcggcttctacaagggcaccccggacggccagttcggcggccagacccgggaggcg
ctgcgcaatttccaggcctcgatcggggtccccgccgacggatttgcctcctccgacgtg
ctggatcggctccgaggacggtaa
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