Bacillus sp. JS: MY9_2899
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Entry
MY9_2899 CDS
T02027
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bjs
Bacillus sp. JS
Pathway
bjs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MY9_2899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bjs03400
]
MY9_2899
Enzymes [BR:
bjs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MY9_2899
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MY9_2899
DNA repair and recombination proteins [BR:
bjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MY9_2899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Mrpl_C
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
AFI29432
LinkDB
All DBs
Position
complement(2836660..2837493)
Genome browser
AA seq
277 aa
AA seq
DB search
MDVPELPEVETVRRTLTGLVKGKTIKSVEIRWPNIIKRPAEPEEFARNLAGETIQSIGRR
GKFLLFHLDHYVMVSHLRMEGKYGLHQAKEPDDKHVHVIFTMTDGTQLRYRDVRKFGTMH
LFKPGEEAGELPLSQLGPEPDAEEFTSAYLKERLAKTNRAVKTALLDQKTVVGLGNIYVD
EALFRAGVHPETKANQLSDQTIKTLHAEIKNTLQEAIDAGGSTVRSYINSQGEIGMFQLQ
HFVYGKKDKPCKNCGTMISKIVVGGRGTHFCARCQKK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgccggaattaccagaggttgagacggtccggcgcactctgaccgggcttgta
aagggaaaaacaatcaaatcggtagagatcagatggccgaatatcatcaaacggcctgcc
gagccggaggaatttgcgcgaaatctagcaggagaaacgatacagtctatcggaagacgg
ggaaagtttttgctgtttcatttagatcattatgtcatggtttcccacctgcgaatggaa
gggaaatacgggcttcatcaagcgaaggagccagacgataaacatgtgcatgtcatattt
acgatgacggatggaacccagctccgttacagagatgttcggaagtttggaaccatgcac
ttatttaaaccgggagaagaggcgggcgagctcccgctttctcagttaggtccggagccg
gatgcagaagaatttacgagtgcatatttaaaagaacggcttgccaaaacaaaccgcgct
gtcaaaactgccctgctggatcaaaaaacggtcgtcggactagggaacatttatgtggac
gaggctcttttcagagcgggtgtccatcccgagacaaaagcaaatcaattatcagatcag
acaatcaaaacccttcacgctgaaatcaaaaataccctgcaggaagcgattgatgcaggc
ggcagcacagtccgctcgtatatcaactcccaaggggaaatcggaatgttccagctgcag
cattttgtgtacggaaaaaaagacaagccatgcaaaaattgcggaacgatgatttcgaaa
attgtcgtcgggggaaggggcacgcatttttgcgcaaggtgccagaaaaaatag
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