Bradyrhizobium japonicum USDA 6: BJ6T_04210
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Entry
BJ6T_04210 CDS
T01848
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
bju
Bradyrhizobium japonicum USDA 6
Pathway
bju00020
Citrate cycle (TCA cycle)
bju00785
Lipoic acid metabolism
bju01100
Metabolic pathways
bju01110
Biosynthesis of secondary metabolites
bju01120
Microbial metabolism in diverse environments
bju01200
Carbon metabolism
bju01210
2-Oxocarboxylic acid metabolism
Module
bju_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bju_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
bju00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BJ6T_04210
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BJ6T_04210
Enzymes [BR:
bju01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
BJ6T_04210
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
BAL05719
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All DBs
Position
complement(441641..444610)
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AA seq
989 aa
AA seq
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MSRQDANAAFALSSFLQGTNATYIDEIYARYEKDPSSVDAEWQEFFKSLNDQPGDISKNA
EGPSWERANWPLTPQDDLTSALDGNWAQVEKAVGAKIAAKAQAQAGNKGADFSSADVLQA
TRDSVRALMLIRSYRMRGHFHAKLDPLGIEAPRNREELDPRTYGFSEADFDRKIFLDHVL
GLEYATLREITAICERTYCQTLGVEFMHISNAAQKAWIQERIEGPDKEISFTREGRRAIL
MKLVEAEGFEKFCDTKFTGTKRFGLDGGESLIPALEQIIKRGGNLGVKEVVLGMPHRGRL
NVLTQVMGKAHRALFHEFKGGSANPDAVEGSGDVKYHLGASSDREFDGNRIHLSLTANPS
HLEIVDPVVLGKVRAKQDQHGDPPDQRISVMPLLMHGDAAFAGQGVVAECFGLSDLKGYR
TGGSVHFIVNNQIGFTTYPRYSRSSPYPSDVAKMIDAPIFHVNGDDPEAVVFAAKVATEF
RQKFHKPVVIDMFCYRRHGHNEGDEPAFTQPVMYKRIAAHPSTLELYARRLISEGVMTEG
EVDKAKADWRARLDAEFEAGTSYKPNKADWLDGKWSGFKIADQEEDARRGVTGVDTAALK
EIGRKITKVPDGFRVHRTIQRFLDNRAKAIDTGVGIDWATGEALAFCTLLNENHHVRLSG
QDSERGTFSQRHSVLIDQEDESRYTPFNHLGHEQGHYEVINSLLSEEAVLGFEYGYSLAE
PNTLTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGPEHSSARLE
RYLQMCAEDNMQVVYPTTPANYFHVLRRQLHREIRKPLILMTPKSLLRHKRAVSRLEELA
KGTTFHRILYDDAQMLPNEAIKLVPDEKVRRIVLCSGKVYYDLYEEREKRGIDDIYLMRV
EQLYPVPLKALVAELSRFKKAEVVWCQEEPRNMGAWHFIEPYLEWVLNQVHGASRRPRYV
GRAASAATATGLMSKHQAQLKAFLDEALS
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccaagacgcgaacgcagcctttgccctctcttcctttttgcagggcaccaac
gccacctacatcgacgaaatctacgcccgctacgagaaggacccgtcctcggtcgacgcc
gagtggcaggagttcttcaagagcctcaacgaccagcccggcgatatcagcaagaacgcc
gaaggcccgtcctgggagcgcgccaactggccgctgaccccccaggacgacctcacctcc
gctctcgacggcaactgggcccaggtcgagaaggcggtcggtgccaagatcgccgccaag
gcgcaggcccaggcgggcaacaagggcgccgatttctcgtccgccgacgtgctccaagcc
acgcgcgactccgtccgcgcgctgatgctgatccgctcctaccgcatgcgcggccacttc
cacgccaagctcgatccgctcggcatcgaagccccgcgcaaccgcgaagagctcgacccg
cgcacctacggcttcagcgaagccgatttcgaccgcaagatcttcctcgatcacgtgctg
ggtctcgaatacgccacgctgcgcgagatcaccgcgatctgcgagcgtacttactgccag
acgctcggcgtcgagttcatgcacatcagcaacgctgcgcagaaggcgtggatccaggag
cgcatcgagggcccggacaaggaaatctcgttcacccgcgaaggccggcgcgcgatcctg
atgaagctggtcgaagccgaaggcttcgagaagttctgcgacaccaagttcaccggcacc
aagcgcttcggcctcgacggcggtgaatcgctgattcccgcgctcgagcagatcatcaag
cgcggcggcaatctcggcgtgaaggaagtcgtgctcggcatgccgcatcgcggccgcctc
aacgtgctgacccaggtgatgggcaaggcgcaccgcgccctgttccatgaattcaagggc
ggctcggccaaccccgatgcggtcgaaggctccggcgacgtcaaatatcacctcggcgcc
tcctcggaccgcgagttcgacggcaaccgcatccatctgtcgctgaccgccaacccctcg
catctcgagatcgtcgatcccgtggtgctcggcaaggtccgcgccaagcaggaccagcac
ggcgatccgccggaccagcgcatctcggtgatgccgctcttgatgcatggcgacgctgcg
ttcgccggccagggcgtggtcgcggaatgcttcggcctgtccgacctgaagggctaccgc
accggcggctccgtccacttcatcgtcaacaaccagatcggcttcaccacctatccgcgc
tactcgcgctcctcgccctatccgtcggacgtggcgaagatgatcgacgcgccgatcttc
cacgtgaacggcgacgacccggaagcggtggttttcgcggccaaggtcgcgaccgaattc
cgccagaagttccacaagcccgtcgtcatcgacatgttctgctaccgcaggcatggccat
aacgagggcgacgagccggccttcacccagccggtgatgtacaagaggatcgcggcccat
ccgtcgacgctcgagctctacgcccgccgcctgatcagcgaaggcgtgatgaccgagggc
gaggtcgacaaggccaaggctgactggcgcgcgcggctcgacgccgagttcgaggccggc
acctcctacaagccgaacaaggccgactggctcgacggcaagtggtccggcttcaagatc
gccgaccaggaagaggatgcgcgccgcggcgtcaccggcgtcgacaccgccgcgctgaag
gaaatcggccgcaagatcaccaaggtgccggatggcttccgcgtccaccgcaccatccag
cgcttcctcgacaatcgcgccaaggcgatcgacaccggcgtcggcatcgattgggcgacc
ggcgaggcattggcgttctgcacgctgctcaacgagaaccaccatgtccgcctgtcgggc
caggattccgagcgcggcacgttctcgcagcgccattcggtcctgatcgaccaggaagac
gagagccgctacacgccgttcaaccatctcggccacgagcagggccattacgaggtcatc
aactcgctgctgtcggaagaagccgtgctcggcttcgaatatggctactcgctcgccgag
ccgaacacgctgacgctgtgggaagcccagttcggcgacttcgccaacggtgcgcaggtc
gtgttcgaccagttcatctcctcgggcgagcgcaaatggctgcgcatgtccggcctcgtc
tgcctcttgccgcacggctatgagggccagggaccggagcactcctcggcgcgtctggag
cgttatctgcagatgtgcgccgaagacaacatgcaggtggtctacccgaccacgccggcg
aactacttccacgtgctgcgccgccagcttcatcgcgagatccgcaagccgctgatcctg
atgacgccgaagtcgctgctgcgtcacaagcgggcggtgtcgcgtctggaggagctcgcg
aagggaacgaccttccaccgcatcctctatgatgacgcccagatgctgccgaacgaggcg
atcaagctcgtccccgacgagaaggtccgccgcatcgtgctctgctccggcaaggtctat
tacgacctctacgaggagcgcgagaagcgcggcatcgacgacatctacctgatgcgcgtc
gagcagctttatccggtgccgctgaaggcgctggtggccgagctgtcgcgcttcaagaag
gctgaagtggtgtggtgccaggaagagccccgcaacatgggtgcctggcacttcatcgag
ccctatctggaatgggtgctgaaccaggtgcacggtgcgagccggcgtccgcgttatgtc
ggccgcgccgcttccgccgcgaccgccactggtctgatgtccaagcatcaggcgcagttg
aaagcgttcctggacgaagcactgagctga
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