Bradyrhizobium japonicum USDA 6: BJ6T_26450 Help Entry BJ6T_26450        CDS       T01848                                  Name (GenBank) hypothetical protein   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism bju  Bradyrhizobium japonicum USDA 6 Pathway bju03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:bju00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     BJ6T_26450  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bju03400]     BJ6T_26450 Enzymes [BR:bju01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      BJ6T_26450 DNA repair and recombination proteins [BR:bju03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      BJ6T_26450 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M RNA_ligase DNA_primase_S Motif Other DBs NCBI-ProteinID:  BAL07923 LinkDB All DBs Position 2716406..2719072 Genome browser AA seq 888 aa AA seqDB search MLRKLSTYRQKRDFEKTPEPSGKTAVAPSAQRRFVIQKHDATRLHYDLRLEFDGVFKSWA VTKGPSLDPHDKRLAVEVEDHPLDYGDFEGTIPEGQYGGGTVMLWDRGTWESEDPERGFQ KGDLKFTLHGDKLHGSWVLVRMRHDRNGGKRTNWLLIKHRDEYASESDDILSEDKSVASG RAMAEIADGKGRAPKPFMLAKGAKAKADAVWQSNRAEEPKGRTVRPAPGAALKRGTGAKT KATTATNAKKVSEMPDFVAPQLCTPVERPPAADGWCHEIKFDGYRVQLRVEDGEATLKTR KGLDWTDKFAAIAKEAGELPDVMIDGEIVALDHNGAPNFSSLQAALSDGKTEDLIFFAFD LLFAEGLDCRRLPLGERKDRLRQLLDAGKRKSSQIRYVEHFESSGDAVLQSACKLELEGV VSKKLDAPYRSGRTESWTKAKCRAGHEVVIGGWKTTNGKFRSLMAGVHRGDHLAFVGMVG TGFGADTVKRIMPSLKAMEAGQSPFGGKNAPKKTRDVHWLKPELVAEIEFAGFTADGNIR QAAFKGLRQDKPAEEVEAETPADTELAKPSARKRAVPSAGKRKDAGTAEVMGVVISKPDK ELWPDGGDGEGVTKLDLARYFEAVGAWMIEHIKGRPCSILRAPDGIGGEKFFQRHAMQGT SNLLELAKVSGDRKPYLQIDRVEGLAAVAQIGGVELHPWNCAPDAYDTPGRLVFDLDPAP DVKFADVVDAAKEMRQRLSDVGMESFCKTTGGKGLHVVVPLLHGARDKVSWKEAKAFAQG VCQWMADDDPERYLLNMSKKLRNGKIFLDYLRNDRLSTAVAPLSPRARDGATVSMPVTWA QVKGDLDPKRYTVRTVPGLLARSKAWDGYDDAAISIKAAAKKLAGKKK NT seq 2667 nt NT seq  +upstreamnt  +downstreamnt gtgctgcgaaaactctccacctaccgacagaaacgcgatttcgagaagacaccggagccg tcgggcaagaccgcggtggcgccatcggcgcagcggcgcttcgtgatccagaagcacgat gcgacgcggctgcactatgatctgcggctcgagttcgacggcgtgttcaagtcgtgggcg gtcaccaagggaccctcgctcgatccgcatgacaagcggctggcggtcgaggtcgaggac catccgctcgactatggcgatttcgaaggcacgattccggaaggacagtatggcggcggc acggtcatgctctgggaccgcggcacctgggagtcggaggatcccgagcgcggtttccag aagggcgacctcaagttcacgctccacggcgacaagctgcatggaagctgggtgctggtg cggatgaggcatgaccgcaacggcggcaagcgcaccaactggctcctgatcaagcatcgc gacgaatatgccagcgagagcgacgacattctaagcgaggacaagtcggtggcctccggc cgcgcgatggcagagatcgccgatggcaagggccgcgcgccaaaaccgttcatgctggcg aagggtgccaaggccaaggccgatgcggtctggcagtccaatcgtgccgaggagccgaaa gggcgcaccgtcaggccggcgcccggcgcggcgttgaagcgcgggacgggcgcaaagaca aaggcgacgaccgcgacaaatgcgaaaaaggtctcggagatgccggacttcgtcgcgccg cagctctgcaccccggtcgagcggccgccggcggccgacggctggtgccacgagatcaag ttcgacggctatcgcgtccagctccgcgtcgaggacggcgaggcgacgctgaagacgcgc aagggcctcgactggaccgacaagttcgcggccatcgcgaaggaggcgggggagcttccc gacgtcatgattgacggcgagatcgtcgcgctggatcacaacggcgcgccgaatttctcc tcgctccaggccgcgctgtcggacggcaagaccgaggacctgatcttctttgccttcgac ctcctgttcgccgaggggctcgattgccggcgcctgccactcggcgagcgcaaggaccgc ctcaggcaactcctggacgcgggcaagaggaagtcgagccaaatccgctatgtcgagcat ttcgagagcagcggcgatgccgtgctgcaatcggcctgcaagctcgagctcgaaggcgtg gtgtcgaagaagctcgatgcgccttaccggtcggggcgaacggaaagctggaccaaggcc aaatgccgcgccggccatgaggtcgtgatcggcggctggaagaccaccaacggcaaattc cgctcgctgatggccggcgtgcaccgcggcgatcatctcgccttcgtcggcatggtcggc accggcttcggcgcggacacggtcaagcgcatcatgccgtccttgaaggccatggaggcc gggcaaagccccttcggcggcaagaacgcgccgaaaaagacgcgcgacgtgcactggctg aagccggagctcgtcgccgagatcgagttcgccggcttcaccgccgacggcaatatccgc caggccgccttcaagggcctgcggcaggacaagccggccgaggaggtcgaggcggaaaca cccgccgataccgaactcgccaagccctcggccaggaagcgtgccgtgccgagtgcaggc aagcggaaggatgccggcacggccgaggtgatgggtgtcgtcatctcgaagccggacaag gagctgtggccggatggcggcgacggcgagggtgtcacaaagctcgatcttgcgcgctac ttcgaggccgtcggtgcctggatgatcgagcacatcaagggccggccctgttcgatcctg cgcgcgcctgatggcatcggcggcgaaaaattcttccagcgccatgccatgcagggcacg tcgaacctgctggagctcgcgaaagtctcgggcgatcgcaagccgtatctgcagatcgat cgcgtcgaggggctcgccgcggtcgcgcagatcggcggcgtcgagctgcatccctggaat tgtgccccggacgcctacgatacgccgggccggctggtgttcgatctcgatcccgcgccg gacgtcaaatttgcagatgtcgtggacgccgccaaggagatgcggcagcgcctttccgac gtcggcatggagagcttttgcaagaccaccggcggcaagggcctgcacgtggtggtgccg ctgctccacggcgcgcgcgacaaggtgagctggaaggaggccaaggcgttcgcgcaaggc gtttgccagtggatggccgacgacgatcccgagcgctatctgctcaacatgtcaaagaag ctgcgcaacggaaagatcttcctggattatttgcgcaatgaccgcctgtcgacggcggtg gccccgctgtcgccccgtgcgcgcgatggcgcgaccgtgtcgatgcccgtgacgtgggcg caggtgaagggcgatctcgatccgaagcggtacacggtgcggacggtgccgggtctgctg gcgcgctcgaaagcctgggatggctatgacgacgcggcgatatcgatcaaggcggcggcg aagaagctcgcggggaaaaagaagtag

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