KEGG   Bradyrhizobium japonicum USDA 6: BJ6T_88520
Entry
BJ6T_88520        CDS       T01848                                 
Name
(GenBank) hypothetical protein
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
bju  Bradyrhizobium japonicum USDA 6
Pathway
bju00470  D-Amino acid metabolism
bju00550  Peptidoglycan biosynthesis
bju01100  Metabolic pathways
bju01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:bju00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BJ6T_88520
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BJ6T_88520
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    BJ6T_88520
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bju01011]
    BJ6T_88520
Enzymes [BR:bju01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     BJ6T_88520
Peptidoglycan biosynthesis and degradation proteins [BR:bju01011]
 Precursor biosynthesis
  Amino acid ligase
   BJ6T_88520
SSDB
Motif
Pfam: Dala_Dala_lig_C ATP-grasp_4 ATP-grasp_3 GARS_A RimK TTL ATPgrasp_ST
Other DBs
NCBI-ProteinID: BAL14094
LinkDB
Position
9182595..9183641
AA seq 348 aa
MRVAVVWNDDHRGVINHFGQPCPEKYGRKTVESVVAALQEGNHDTLLCEGDKGLLATLER
FMPPDSQARPSGIVFNMAYGIQGECRYTHVPAMLEMAGVPYTGSSPLGHALALDKAITKQ
LIRDCGVPTPNFRVMRRGTESTGDLCFPLVVKPRHESTSFGLQLVYEPAQLRQAVEVIVT
QYAQDALVEEYIEGREICVALLGNGELEALPLVEQDFGERETRLITWEDKMHMAVVEPQK
ICPAQVGSNLATILRDISVATFRACRCRDYARVDIRIDRSGHPFVLEINSMAALGIGASY
VLAAKAAGYTFSSLVNGILDVAHARYFGTGISQAEQPSNRERIYYAAG
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgcgggtagccgtcgtgtggaacgatgatcataggggcgtgatcaaccacttcggtcaa
ccttgcccggagaaatacggccgcaagacggtcgaaagcgtggtggcggcactgcaagag
ggtaaccacgacacgctgctgtgcgaaggtgataaaggactgctcgcgacgcttgagcgg
ttcatgccacccgattcgcaagcccgcccttcagggatcgttttcaacatggcgtacgga
attcagggcgagtgccgctacacgcacgttccggccatgctcgagatggctggcgttccg
tacaccggctccagcccgctcgggcacgcactggcgctcgacaaggccattaccaaacag
ctcatccgcgattgcggcgtgccgacgccgaactttcgtgtgatgcgtaggggcaccgag
agtaccggcgatctgtgcttcccgttggtagtaaagccgcgtcatgaatccacgagcttc
ggattgcagctcgtatatgagcccgcccagttgagacaggccgtagaagtgatcgtcacg
caatatgcgcaggatgcactcgtagaagaatacatcgaagggcgggagatctgcgttgcc
ctgctgggaaacggagagcttgaggcgttgcctctggtggagcaggacttcggcgagcgc
gagacgcgtcttatcacttgggaagacaagatgcacatggcggtcgtggagccccagaag
atttgcccggcgcaggtcgggagcaatctcgcgacaatactgcgggatatttcggttgcg
accttccgcgcctgccgctgccgggattacgcccgcgtcgacatccggatcgaccgctcc
gggcacccctttgtcctggagatcaactcgatggccgcactcggtatcggcgcgtcttat
gtcctggccgcgaaagccgccgggtacaccttctcgagtttggtcaacggtatcctcgac
gtcgcccacgcgcggtatttcggaactggcatttcccaggccgaacaaccgtcaaatcgc
gagcggatttattatgccgctgggtag

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