Bifidobacterium longum subsp. longum JDM301: BLJ_0317
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Entry
BLJ_0317 CDS
T01240
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
bll
Bifidobacterium longum subsp. longum JDM301
Pathway
bll03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BLJ_0317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bll03400
]
BLJ_0317
Enzymes [BR:
bll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLJ_0317
DNA repair and recombination proteins [BR:
bll03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BLJ_0317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecG_dom3_C
AAA_16
AAA_30
Flavi_DEAD
AAA_22
SLFN-g3_helicase
IstB_IS21
nSTAND3
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
ADG99799
UniProt:
D6ZY03
LinkDB
All DBs
Position
385938..388571
Genome browser
AA seq
877 aa
AA seq
DB search
MSITMDTTLASLVTNKRRVSALKSLGIVTVGDALTYYPFRVTEPVPLRAIREAAPGQQMA
FAAVIRDMRVVPMNARRGYRLEATVDDADFARSRRVPGSTARLTFFSYRKSYVDWVSMRL
RAGTSVVVSGMPSEYMGQLQFTHPEILTVAPGSAGAGAGLEGYARGAASGNGAFAGSTDP
YASVQSAYPPAAAASSGAALKYDADTVQEALTRVCRPRPVYHASSRISSEHIHETILGLL
WMMGARTSSTPDGQLAGAGSAGIVAPTTDTIAVQNGEENSGTTAESGAEALSQSIPDVLP
ESVRKAKNLMHRAEAFLAIHDPASTTRFKEAIETLRYEEAFVSQTSLLKARSHAHKSAAH
SCPLVTDSLRDQFIASLPFSLTAGQQQVIHDIAADLAHDWPMQRLLQGEVGSGKTVVALA
AMLQAVDAGYQAVLVAPTQVLAEQHAETIGRMVEQLKPAIPVTLLTGGMKLAARRKALAA
ASSGEPGIIVATHAAFSKTFQAPHLALVVIDEQHRFGVEQRESLNAKTDDGTTPHLLVMT
ATPIPRTAAMTWFGDLDISWLTELPGGRKPIRTVVVNEADAATMGRMFAHIRARVDAGER
AYIVCPRIDADDEGNEGGSGVSAAAGSARGRAAASGSSARTAAGGRATRAAADAIGIDDP
YETFDENGETVARPPLHAVAEIADRLQKLPQFQGIRFATLTGRDKDDVKTQVMADFAGGE
TPILVSTTVIEVGVDVKQASCIVIFDADRYGLSQLHQLRGRVGRGGTNSWAFLISRAEPG
SPAEQRLEVIHHSLDGAEIAQADLEFRGAGDVLGDAQSGGKSSLKLLRVVKDADMIADAR
TRAEQLLAADPELADEVQLAGAVLDFTRGNETFLTSS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcactatggacaccactctcgcttcgctggtcaccaacaagcgtcgcgtgtcc
gcgctcaaatcgctgggaatcgtcactgtcggcgacgccctgacctactatcccttccgc
gtcaccgaaccggtgccgcttcgcgccatccgcgaggccgcacccggccagcagatggca
tttgccgccgtgatacgagacatgcgcgtggtgccgatgaacgctcgccgcggctaccga
ctcgaggcgacggttgacgacgccgactttgcccgttcgcgtcgcgtacccggcagcacg
gcccggctcacgttcttttcgtatcgtaaatcgtatgtggattgggtcagcatgcggctg
cgcgccggcacgtctgtggtggtctccggtatgcccagcgaatacatggggcagctgcaa
ttcacgcaccccgaaatcctcactgtcgcgcccgggtcggccggagcaggagcggggctt
gagggttacgctcggggtgcggcatccggcaatggtgcgtttgcgggaagtaccgatccg
tatgccagtgtgcagtccgcgtatccgccggccgcggctgcctcttccggggccgcgctg
aaatacgacgccgataccgtgcaagaggcgcttacccgcgtctgccggccccgcccggta
tatcacgccagttcgcgtatctcgtccgaacatattcatgagacgattctgggattgctg
tggatgatgggggcccgcacgtcatccacgcctgacgggcaactcgctggcgctgggtca
gccggcattgtggctcccacgaccgacaccatcgccgtccaaaacggggaagagaattcc
ggtacgaccgccgaatccggtgctgaggcgctctcccaatccatcccagatgtgctgccc
gaatcggtgcgcaaggccaagaacctcatgcatcgggctgaggcgttcctggccattcat
gatccggcctccacgacccggttcaaggaggccatcgaaaccctgcgctatgaggaggct
ttcgtttcgcagacctcgctgcttaaagccaggtcgcacgcccataaatccgcggctcac
tcttgcccgttggtaaccgacagtctgcgcgatcagttcatcgcatccctgccgttctcc
ctcactgcagggcagcagcaggttattcatgatattgccgccgatttggctcatgactgg
ccaatgcagcgtctgctgcaaggcgaggtgggctccggcaaaaccgtagtggcgctcgct
gccatgctccaagccgtagacgccggctatcaggccgtgcttgttgccccgactcaggtg
ctggccgagcagcatgccgaaaccattggccggatggtggagcaactcaagccagcgatt
ccagtcacgttgttgacgggcggcatgaagcttgctgcgcgacgtaaagcacttgctgcg
gcgtccagtggcgagccgggcattatcgtggccacgcacgcggcgttttccaagaccttt
caagccccgcacttggccttggtggtaatcgacgagcagcaccggttcggtgtggaacag
cgcgaaagtctcaacgccaaaaccgatgacggcaccacgccgcatctattggtgatgacc
gccacgcccatcccgcgcactgccgccatgacttggtttggcgatctcgatatttcctgg
ctcaccgaattgcctggcggccgcaaaccgattcgcaccgtggtggtcaatgaggccgac
gccgccaccatgggccgtatgttcgcgcacattcgcgcgcgagtcgacgcgggggagcgg
gcctatatcgtgtgcccgcgcattgatgcggatgatgaggggaacgaaggcggttccggc
gtttcggcagcagccggttctgcccgcggacgcgccgcagcatctggttccagtgcccgc
acagctgcgggcggccgtgcaacgcgcgcggcggccgacgccatcggcatcgacgacccc
tacgaaaccttcgacgaaaacggcgaaaccgtggctcgcccgccattgcatgcggtggcc
gaaatcgccgaccggttgcagaaactcccgcaattccaaggcattcggtttgcgactctg
accggccgcgacaaggatgacgtcaaaacccaggtcatggccgattttgccggcggcgag
actccgattctggtgtccaccacggtgatcgaagtcggcgtggacgtcaagcaggccagc
tgcatcgtgatctttgatgccgaccgatacggcctctctcagttgcatcagctgcgcggc
cgcgtggggcgtggcggcaccaactcgtgggcgttccttatttcccgtgcggaacccggc
tccccggccgagcaacggctcgaagtgattcaccactcgctcgacggtgccgaaatcgcc
caagccgacttggaattccgcggtgccggcgatgtgctcggcgacgcccaatccggcggc
aagtccagcctgaagctcctgcgcgtggtcaaggacgccgacatgatcgccgacgcccgc
acccgtgccgagcagcttctggctgccgaccccgaactggcagacgaggtccaactcgcc
ggtgccgtcctcgacttcacccgaggcaacgaaaccttcctgacctccagctga
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