KEGG   Brevibacillus laterosporus: BRLA_c033620Help
Entry
BRLA_c033620      CDS       T03762                                 

Gene name
ykoU
Definition
(GenBank) putative ATP-dependent DNA ligase YkoU
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
blr  Brevibacillus laterosporus
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:blr00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    BRLA_c033620 (ykoU)
Enzymes [BR:blr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BRLA_c033620 (ykoU)
DNA repair and recombination proteins [BR:blr03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BRLA_c033620 (ykoU)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
3718558..3719454
Genome map
AA seq 298 aa AA seqDB search
MAIATKEYRLEIEGKELVITNPDKPLWPKASVTKLIYLQYLIQMAPYILPYTTDRFLTVI
RYPHGVEDKSFYQKNLPDYAPEWIPRAVDGSITYALLNDTATLIWMANQAVLEWHIAFHT
YQEEWPTELVFDLDPSTPDFRDAIEASLYLKEILDELQLNSYPKTSGASGIQVYIPIQPG
YAFEQTRKVGEFICNYLTQKYPKTLTIERLTKNRGTKLYLDYLQHWRGKTLPAPYTTRAK
ELATVSAPLSWSEIESVHPSDFTIHTMPERVKQKGDLFLPLQQQENRSTLDHILDILS
NT seq 897 nt NT seq  +upstreamnt  +downstreamnt
atggcgattgctacgaaagagtatcgtttagagatcgaaggaaaagaactagttatcacc
aatcccgataagcctctttggcctaaagccagcgtaaccaaactcatctatttacaatat
ctcatacaaatggctccttatatactcccttatacaactgatcgatttttaactgtgatt
cgctatccgcatggagtcgaggataaatcgttttaccaaaaaaatcttccagattatgcg
ccagagtggattccacgtgctgtagatggctctatcacctatgcattgttaaatgatact
gccacactgatctggatggccaatcaggctgtattagaatggcacattgcttttcatacc
tatcaagaggaatggcctactgagttggtttttgatcttgatccatccactcccgatttt
agagatgcaatagaagctagtttgtatctaaaagagattctggatgagctacagctcaac
agctatcccaaaacatcgggggccagtggtatccaagtttatattcctattcagccaggc
tatgctttcgaacaaactcgaaaggtaggagaatttatttgtaactatctgacgcaaaaa
tatccgaaaacattaaccatcgaacgtttgacgaagaatcgaggaacgaagttatatctc
gattacttacagcattggcgcggcaaaacattacccgctccctacacaaccagagccaag
gaactagcaacagtctccgcccctctaagctggtcggaaatagagagtgtacatcctagt
gattttactatccacacaatgcctgaacgggtcaaacaaaaaggagacttatttcttcct
ttacaacagcaagaaaatcgatctactctagaccatattttagatatattaagctaa

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