KEGG   Brevibacterium linens BS258: A2T55_13945Help
Entry
A2T55_13945       CDS       T04319                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bly  Brevibacterium linens BS258
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bly00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    A2T55_13945
Enzymes [BR:bly01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A2T55_13945
DNA repair and recombination proteins [BR:bly03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     A2T55_13945
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(3163057..3165615)
Genome map
AA seq 852 aa AA seqDB search
MAGHEQKVTVEGHRLTLSNLDKVLYPETGTTKGEILDYCARIAPHLIRHARDRIATRKRW
VDGVGTPDDPGDVFFEKNLPDSAPSWIRTRAIRHSTGTKRYPLVNDLATLTYLTQMAAIE
IHVPQWRVSAGAKDPGTIDAETRCPDRMVFDLDTGPGRGLADCIEVAQLVRELLEGMDLE
VYPVTSGSKGVHLYAPLDGSVSSQQVSDVAHELARSLEADHTNLIVSAMKKTLRENKVLI
DWSQNSASKTTVAPYSLRGRFTPLVAAPRRWDEFDDPAAVEQVRFEEVLDRVDEVGDLLE
PLAEAVGGTASAPESRADSESEADPKSDDAPKAERDRLEVYRSKRDPKRTSEPVPGKQGT
SGDELTFVIQEHHARSLHWDFRLEHDGVLVSWALPKGPPTDPGKNHLAVQTEDHPLEYGS
FEGTIPKGEYGAGDVEIWDAGTIEVEKWQEGKEIIAVLHGREDGGLGGVRRFALFNTGDH
GPNKEPEKNWMIHLMEDEPKKQSAAADDSSKKGTPTGRTSKKRAAQKEALPADLAPMLAS
IGDIGSLRREAEAWAFEMKWDGIRALARVQPGDGEHTGSIELTSRNGHDMTNTYPELHEL
VECIDVDCILDGEIVALGQGSRPDFGRLQRRMGLSRDSDIEREQRRTPVYLMLFDVLHAD
GSSLLRAPYTERRARLFELVTESEHIHVPEAFEGSVDAAFESSRKLRLEGVLAKRTDSVY
LPGKRTRTWAKLKHASTRDVIIVGWRTGEGERSSSFASLLVAAHDDEGLHYLGRVGTGFD
EAALRTLRSSLDRRSRKTPALTVPADESRDAHWVRPDLVGEVRFSGLTEAGRLRHPVWRG
LRSDIDAEDLRV
NT seq 2559 nt NT seq  +upstreamnt  +downstreamnt
gtggcaggtcacgagcagaaggtcacggtcgagggtcatcgactgacattgagcaatctg
gacaaggttctctacccggagaccggcacgacgaagggggagatcctcgactactgcgcc
aggatcgccccgcacctcatccgccatgcccgggaccggatcgccacgcgcaaacgctgg
gtcgacggcgtcggcactcccgatgacccgggggacgtgttcttcgagaagaacctcccg
gactccgcaccgtcgtggatccgaacacgggcgatccggcactccacgggcaccaaacgc
tatcccctggtcaacgatcttgcgaccctgacctatctcacgcagatggccgcgatcgag
atccatgtgccccagtggagggtgagcgcgggagcgaaggaccccggcacaatcgacgcg
gagacccgctgccccgaccgcatggtcttcgacctggacacgggccccggacgcggcctc
gccgactgcatcgaggtggcccagctcgtgcgcgaactgctcgagggcatggacctggag
gtctacccggtgaccagcggatcgaaaggcgtccacctctatgcgccgctggacgggtcg
gtgagctcgcagcaggtctccgatgtcgcccatgagctcgcccgcagcctggaggccgac
cacacgaacctcatcgtctctgcgatgaagaagacgctgcgggagaacaaggtactcatc
gactggtcgcagaattcggcgtcgaagaccacggtggctccgtattcgctgcgcggacgc
ttcacccccttggtcgccgcaccgcgcaggtgggacgaattcgacgacccggccgccgtc
gagcaggtgcgcttcgaagaggtcctcgaccgggtcgatgaggtcggggacctcctcgag
cccctcgccgaggcggtcggaggaaccgcttcggccccggagtccagggccgattcggag
tccgaagccgacccgaagtcggacgatgccccgaaagccgagcgcgaccgactggaggtc
tatcggtccaaacgggatccgaagcgcacgagcgaacccgtgccagggaaacagggaacg
agcggggacgagctgactttcgtcatccaggaacaccatgcgaggagcctccactgggac
ttccgactcgaacacgatggagtattggtgtcctgggcgctgccgaaggggccgccgacc
gaccccgggaagaaccacctggcggtccagaccgaggatcaccccctcgaatacggcagc
ttcgaaggcacgatcccgaaaggggagtacggggccggcgacgtcgagatctgggacgca
ggcaccatcgaggtcgagaagtggcaagaaggcaaggagatcatcgcggtcctccacggg
cgtgaggacggcggtctcgggggagtgcggcggttcgccctgttcaacaccggtgaccac
ggaccgaacaaggagcccgagaagaactggatgatccacctcatggaggacgagccgaag
aagcagtcggcggcagcggacgactcatcgaagaagggcacgccgaccgggcgtacctcc
aagaagcgagccgcgcagaaggaggctctgccggcggatttggccccgatgctcgcaagc
atcggcgacatcggctccctccggcgggaggccgaggcttgggccttcgagatgaaatgg
gacggcatccgtgcgctggcgagggtgcagcccggtgacggggagcacaccggcagcatc
gagctgaccagtcgcaacggccatgacatgacgaacacgtacccggagcttcacgaactg
gtcgagtgtatcgatgtcgactgcatcctcgacggtgagatcgtcgccctcgggcagggc
agccgaccggacttcggacgcctccagcgcagaatggggctgagccgggacagcgatatc
gaacgggaacagcgacgcacccctgtctacctcatgctcttcgacgtcctccacgcggac
ggatcgtcgttgctgcgcgccccctatacggaacggcgcgcacgtctgttcgaactcgtg
accgagagcgagcacatccatgtgcccgaggccttcgagggaagcgtcgacgccgccttc
gaatccagtcggaagcttcgactcgaaggagtgctggcgaagcggaccgacagcgtctat
ctgcccggcaagcgcacccgcacctgggccaagctcaagcacgcctcgacccgcgatgtc
atcatcgtcggctggcggaccggagaaggagaacgctcatccagcttcgcctcgctattg
gtcgccgcccatgacgacgaagggctccactacctcggtcgcgtgggcaccgggttcgac
gaggcggccctgcggactctgcgctccagcctcgatcgccggtcgcggaagacgccggcg
ctcaccgtgccggccgacgagtcgcgagatgcccactgggtgcgacccgacctcgtcggg
gaggtccggttctctggcctgaccgaggccggacgtctgcggcacccggtctggcgcggc
ctgcgctccgacatcgacgcagaggacctccgagtctga

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