Blastomonas marina: T8S45_04470
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Entry
T8S45_04470 CDS
T09636
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bmaa
Blastomonas marina
Pathway
bmaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T8S45_04470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmaa03400
]
T8S45_04470
Enzymes [BR:
bmaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
T8S45_04470
DNA repair and recombination proteins [BR:
bmaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
T8S45_04470
BRITE hierarchy
Motif
Pfam:
DUF4130
UDG
STI1-HOP_DP
Motif
Other DBs
NCBI-ProteinID:
WPZ04801
LinkDB
All DBs
Position
complement(921804..923240)
Genome browser
AA seq
478 aa
AA seq
DB search
MTALQHVELGTYYVVHLIEPDDFDFWRERARALVRCDVPPDRIAWVEPGGSGDLFAHGER
RMPIPDDDAPPVRASKRFVKLAKNAILHSDPERFALLYRLLWRLQANPRAMENKADPDVR
RIEELDKNVRRDSHKMHAFVRFRLVENEEDDEEHYVAWFEPEHHILRANAGFFVRRFANM
KWSILTPQGSLHWDGEALTEGPPAQRDDAPSGDPTEDLWRKYYASIFNPARLKVGAMLKE
MPRKYWKNMPEAALIPELVAGAQSRESQMVAAGALEFEQRPDTLAAIDTAIHACRKCPIG
ELENEAVMGEGPQDATLMIVGEQPGDHEDRAGRPFVGPAGQLLDVHLEQAGIDRRRAYVT
NTVKHFKYVQRGKRRLHQNPGAKEIDTCRWWIEAERAIVKPKLVLAMGASAARGMLGKTV
SISRARGEPILLEDGSELWITAHPSYLLRLEGTAREEQARLFDADLVAVAERLAELEA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgctgcagcacgtcgagctgggcacctattacgtggtgcatctgatcgagccc
gacgatttcgatttctggcgcgaacgcgcgcgggcgctggtccggtgcgatgtgccaccc
gatcggatcgcctgggtcgaaccgggtggcagcggggatctctttgcccatggtgagcgc
cggatgccgatcccggacgacgacgcgccgccggtgcgcgcgagcaagcggttcgtgaag
ctggcgaagaacgcgatccttcattccgatcccgaacgcttcgcgctgctctatcgcctg
ctgtggcggttgcaggccaatccccgcgcgatggagaacaaggccgatccggacgtgcgg
cggatcgaggagctcgacaagaacgtccgccgcgacagccacaagatgcacgccttcgtg
cgtttccgcctcgtcgaaaacgaggaggatgacgaggagcactacgtcgcgtggttcgag
cccgagcaccatatcctgcgcgccaatgcgggcttcttcgtgcgccgcttcgccaacatg
aaatggtcgatcctgaccccgcagggctcgctgcactgggatggcgaggcgctgaccgag
ggtccgcccgcgcagcgcgacgatgcgcccagcggcgatccgaccgaggatctgtggcgc
aagtactacgcctcgatcttcaaccctgcgcggctcaaagtgggcgcgatgctcaaggag
atgccgcgcaaatactggaagaacatgcccgaggccgcgctcatccccgaactggtcgcg
ggtgcgcagagccgcgaatcgcagatggtcgcggcgggcgcgctcgagttcgagcaacgc
cccgatacgctcgcggcgatcgacaccgccatccatgcctgccgcaaatgcccgatcggc
gaactcgagaacgaggcggtgatgggcgagggaccgcaggacgcgacccttatgatcgtc
ggcgagcagccgggcgaccacgaggaccgggccgggcgccccttcgtggggccggcgggg
caattgctcgacgtccatctcgaacaggccgggatcgatcgtcgccgcgcctatgtcacc
aacacggtcaagcacttcaaatatgtccagcgcggcaagcggcgcctgcaccagaacccg
ggggcgaaggagatcgacacctgtcgctggtggatcgaggccgagcgcgcgatcgtgaag
ccgaagctggtactcgccatgggcgcgagcgcggcgcggggcatgctcggcaagacggtg
agcatttcgcgggcgcgcggcgaaccgatcctgctcgaggacgggagcgagctgtggatc
accgcgcatccgtcctacctgctccgcctcgagggcacagcgcgcgaggaacaggcgcgg
ctgttcgatgccgatctcgtcgcggtcgccgaacgcctggcggaactggaggcgtga
DBGET
integrated database retrieval system
