Bombyx mandarina (wild silkworm): 114241945
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Entry
114241945 CDS
T05882
Name
(RefSeq) serine/threonine-protein kinase SMG1-like isoform X1
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114241945
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bman01001
]
114241945
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114241945
Enzymes [BR:
bman01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
114241945
Protein kinases [BR:
bman01001
]
Serine/threonine kinases: Other
PIKK family [OT]
114241945
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114241945
mRNA cycle factors
Common to processing body (P body) and stress granule
114241945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FATC
DUF2130
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
114241945
NCBI-ProteinID:
XP_028028783
UniProt:
A0A6J2JHL5
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MRRGRETLLTLLEAFVYDPLVEWGGSSGGKRRRTQRDVKSALDMMAVRAQELQHSLAQVT
EQFLAILPGIIESADKWQKEHEELVEVEARLQDCHQQMALIKEIEAYGPNLNNHPLHAIS
QKYSSYKQAKNAVEDSKKALVKILNDFDAQIESFSATSELLNGPQLMAWVQEFSAPNEEE
DTPIFEHIKDFLTNAGQSSMITQCEQAEKEFYQSLKQTQCIIRACLELLSQYVAVSQYFP
QSQTEYHRIVMFRKFLAAALDSKSPEVCREVASQVNAIINAENNKGDPQQIIAYNYRLET
ISAKANANLAKCVEKLQLEGGPEAMAVAQEAYREAKASIGNWVRSEEGAATALECAVISM
LCHLNRRYLMLESGAQSAGDCLVDLTSREGEWFLDDMSALSTQAVELLSLLPLQSASVED
AALPVAVECVRNVNYLLADLVQLNYNFSTIILPEALKKIHSEEPSVLLMINELNVVIMNS
TVPLNELLAQLEVHLRYLVMDMEYIVLQSPASSAQVVAAELRARYEALLSAPTSDVEGQS
SGRMLLMGFNGLFAAVELRGRELADHLAIPIPPAWRKIDHISESMHMSATLQSPVMRSVL
EDIFLVRRIQTIAEVFAMCTQMACAFKGTGPLSVYDDAALCKPVKRFTAEYVSRCTLGVG
SRALAAALCLLLHRHGVDIAAEVEQKEIGASWSVSLESLCEKAVGGERGAALVRDVQAAR
AALCAAAAVLRAHARALTTSHHAARAHLAHLHLHHETVGGHRDLCALLARRSRELSAGLE
RLTAAAAKMKSLLNSAHQRVKWGAGANPSLSSIVSRLEQAGAAADTRAARALSAAAALTA
PARCAARARLRPPRHARTLAAALHHWEKACTLAQKYALDVSPVEEALMEMLHPEGNIDTQ
WVENVSALLREMIAQLVADVAARQERAASAGASVRESVRGAGAAGAAWRDVTAAAAPHLL
VLQPALQGNNPAQEYLSMERELSRELAALTAGAAGSGAAGGAAGGAAAGDVSRGARRVRE
LLPALAHTLLHVHENWPTEQGGRKLTRQAAVTSNNKHACESAVGASVWRRVRLKLEGRPQ
PHELVDHLISEATSAENLCLMYEGWMAWV
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtggccgcgaaaccctgttgacgttgttggaagcgttcgtgtacgacccgctg
gtcgaatggggcggcagcagcggagggaagcgacgccgcacgcagagagacgttaaatcg
gctttggacatgatggcggtgagagcacaagaattgcaacatagtctggcccaagtcaca
gaacaatttctggccatcttgcctggtatcattgaaagtgctgacaagtggcaaaaagaa
catgaagaactggttgaagtcgaggcgagactccaagattgccaccaacaaatggcacta
atcaaagaaatagaagcatatggacctaatctgaacaaccatccattacacgcaatctcg
caaaagtactcttcatacaaacaagctaagaatgctgttgaagattccaaaaaagcgtta
gtcaaaatactgaatgattttgacgcacagatcgaaagtttctcagcgacttctgaactt
cttaatggtccgcaattgatggcttgggtacaagaattttccgctccaaacgaagaagaa
gacacgccgatctttgaacacataaaagattttctaacaaatgcaggtcaaagctccatg
atcactcaatgcgaacaagccgaaaaagaattttatcaatctttaaaacagacccagtgc
atcattagggcttgtctggaacttttgtcacaatacgtagctgtctctcaatatttccca
cagagtcaaacggaataccatcgcatagttatgttccggaagttccttgctgctgctcta
gacagcaaatcgcccgaggtttgccgagaggttgccagtcaagtcaacgccatcatcaat
gcggagaacaacaaaggcgatccgcaacaaattattgcttataattatcgcttggaaacc
atcagtgctaaagcgaacgcaaacttggctaagtgtgttgagaagttgcaactagaaggt
ggaccagaagccatggctgttgctcaagaagcttacagagaggcaaaggcgagcatcggc
aactgggtcaggtctgaagaaggagccgcaaccgctttagaatgtgctgttatcagcatg
ctgtgtcatttaaatcgaagatatctgatgcttgagagcggtgcccaaagtgctggtgat
tgtctcgtggacttaacgtcgagagaaggagagtggttcctagatgatatgagcgctttg
tcgacccaagctgtggagcttttatcgctgctgccgttgcagtctgcttcagtagaagac
gctgctttaccagtagcagtggagtgtgttcggaatgtgaattacctgctagctgatttg
gtccaactaaattacaatttcagcacgatcatacttcctgaagcgttaaagaagatacat
tctgaagaaccgtctgtcctactaatgataaatgaactgaatgtggtcataatgaattct
actgtgcctttgaacgagttattggcccagcttgaagtgcatcttagatacttggtcatg
gatatggagtacattgttttgcagtctccagcaagcagcgctcaagttgtagcggcagaa
ctgcgtgctcgttatgaagcactgctttctgccccgacttctgatgtggagggacagtct
tcaggacgaatgctccttatgggtttcaacggactattcgctgctgtagaattgagagga
agagaactggccgaccacttggcaatacctatacctccggcttggaggaagattgatcat
atcagcgaatctatgcacatgtctgcgactctccaaagccccgtgatgcggtcggtcttg
gaggacatattcctggtgcgccgcatccagaccatcgcggaagtgttcgccatgtgcacg
cagatggcgtgcgccttcaagggcaccggacctttgagtgtttatgatgacgcagcgctc
tgcaagcccgtcaaacgcttcacagcggagtacgtatcgcgctgtacgctgggcgtgggc
tcacgagctctggcggccgcgctctgtctcctgctgcatcggcacggagtcgacattgct
gccgaagtggaacagaaggaaattggtgcgtcgtggagcgtgtcgctggagtcgttgtgc
gagaaggcggtgggcggggagcgcggggcggcgctcgtgcgcgacgtacaggccgctcgt
gccgcgctctgtgccgccgccgccgtgctgcgcgcgcacgcacgggcgctcaccacctcg
caccacgcggcccgcgcgcacctcgcgcacctgcatctgcaccacgagaccgtcggcggg
caccgcgacctgtgcgcgctgctggcgcggcgctcgcgggagttgtccgcgggcctcgag
cggctcaccgccgccgccgccaagatgaagtctctgctaaactcggctcaccagagagta
aaatggggcgccggcgccaacccgtcgctgtcgagcatcgtgtcgcggctggagcaggcc
ggcgccgccgcagacacgcgggctgcgcgagccctatccgccgccgccgcgctcaccgcg
cccgcccgctgcgccgctcgcgcccgcctgcgaccgccgcgacacgcgcgcaccctcgcc
gccgccctgcaccactgggagaaggcgtgcaccctagcgcagaagtacgccctggatgtg
tcgccggtggaagaagccctcatggagatgttgcaccctgaagggaatatagatacacaa
tgggtcgagaacgtctcggcgctgctccgcgagatgatagcgcagctggtggcagatgtt
gccgcccgccaggagcgcgcggcgagcgcgggtgccagcgtgcgggagagcgtgcggggt
gcgggcgcggcgggcgcggcctggcgtgacgtcacggccgccgcggcgccgcatctgctg
gtgctgcagccggcgctgcagggcaacaaccccgcgcaggagtacctgagtatggagcgc
gagctgtcgcgcgagctggcggcgctgacggcgggtgcggcggggagcggcgcggcgggg
ggtgcggcggggggcgcggcggcgggcgacgtgtcccgcggcgcgcggcgcgtgcgcgag
ctgctgccggcgctggcgcacacgctactgcatgtccacgagaactggccgacggagcag
ggcggccgcaagctgacgagacaggccgccgtcacctccaacaacaaacacgcgtgcgag
agcgcggtgggcgccagcgtgtggcgccgggtgcggctcaagctggaggggaggccgcag
ccgcacgagctggtggaccacctgatatctgaggccaccagcgcggaaaacctgtgcctg
atgtacgaaggctggatggcctgggtgtga
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