KEGG   Burkholderia metallica: WJ16_17055Help
Entry
WJ16_17055        CDS       T04871                                 

Definition
(GenBank) DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bmec  Burkholderia metallica
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bmec00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    WJ16_17055
Enzymes [BR:bmec01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     WJ16_17055
DNA repair and recombination proteins [BR:bmec03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     WJ16_17055
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
3:253025..255760
Genome map
AA seq 911 aa AA seqDB search
MAGKLDPYRRKRRFDATPEPQGAHGRRRAHADANAQTARDTPKARPARKAGAAARTARPL
RFVIQEHHARRLHYDFRLELDGTLKSWAIPKGPSVDPSVKRLAVHVEDHPLEYASFEGEI
PAGHYGAGSVTVWDEGTWTPDGGIAQARAGYRAGKLTFRLDGTKLHGGWALVRSGRQQGR
QEQWLLIKERDDDARDAEAFDVVAERPGSVHGSPPASAAAPHDSGGASTAAVDPSRVEGA
VRAALPDWIAPQLATLVDTPPAQDDWRYEVKFDGYRILARIAGRGTRRRVTLMTREGRDW
TAKLRVQRDALAALDVDNAWLDGEAVVLGENGLPNFQALQNALGAGRSEAVTLFVFDLPY
LDGYDLRDAPLTARRALLGPLLAGSDPARLRDSPDLGGDVAALFANACDTGLEGLIGKRA
DSRYRGGRSSTWIKLKCRRRQEFVIGGYTEPSGSRHGFGALLLGVHEPPAGGKRQRGAAP
LRYVGRVGTGFDTRMLDRLAALLRRHERATPPFDPPPRERSRTRVHWVEPTLVAECEFAE
WTGDGIVRQAAFIALREDKPARQIVREVPKPTGTETTMNEPREAHESSPPARKTDTGRRS
ARSSASSGKSHGEAADHVGRVRITHPDRVLDPQSGTRKIDLAHYWQWVAPWLLPDLKGRP
VSLVRAPGDIGGELFFQKHAERREIPFVTQHDGLDPGHGPLLSIDSVDALLGAAQMGTIE
LHTWNAHASNIERPDRMVFDLDPDPALPWRAMIDAAQLVRGLLDALGLVSFCKTSGGKGL
HVVVPLTRHAGWDDVKAFSRAVAQHVAGTLPERFTATMGPRHRRGKIFVDYLRNGRGAST
IAAYSVRARPGLGVSVPLDWDEVPTTTGGAQWTIDTLHERLDALTRDPWEGYANARQRIT
AAMRAELGADS
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggccggcaagctcgacccctatcgccgcaagcgccgcttcgatgcgacgccggagccg
cagggcgcgcacgggcggcggcgcgcgcatgccgacgcgaatgcgcagacggcccgcgat
accccgaaggcccggcctgcgcggaaggcgggcgcggccgcgcgcacggcccggccgctg
cgcttcgtgatccaggagcatcacgcgcggcggctgcactacgacttccggctcgaactc
gacggcacgctgaagtcgtgggccatcccgaaggggccgagcgtcgacccgtcggtgaaa
cggctggccgtgcacgtcgaggatcatccgctcgaatacgcgtcgttcgaaggtgagatc
ccggccgggcactacggcgccggctcggtcaccgtatgggacgaaggcacgtggacgccc
gacggcggcatcgcgcaggcacgcgccggctatcgtgccggcaagctgacgttccgcctc
gacggcacgaagctgcacggcggctgggcgctggtgcgcagcgggcggcagcaggggcgg
caggagcaatggctgctgatcaaggagcgtgacgacgacgcacgcgatgcggaggcattc
gacgtggtcgcggagcggccgggcagcgtgcacggctcgcccccggcgtcggctgcggcg
ccgcatgacagcggcggcgcgagcacggccgcggtcgatccgtcgcgcgtggaaggcgca
gtgcgcgccgcgttgcccgattggatcgcgccgcaactcgcgacactggtcgatacaccg
cccgctcaggacgactggcgctacgaagtgaaattcgacggttaccggatcctggcgcgg
atcgcgggccgcggcacgcggcggcgcgtcacgctgatgacgcgcgaaggtcgcgactgg
accgcgaaactgcgcgtacagcgcgacgcgctcgccgcgctcgacgtcgacaatgcgtgg
ctcgacggcgaggcggtcgtgctcggcgagaatggcctgcccaatttccaggcactgcag
aacgcgctcggcgcgggccgctcggaggccgtgacgctgttcgtgttcgacctgccgtat
ctcgacggctacgacctgcgcgatgcgccgctcaccgcgcgtcgcgcgctgctcgggccc
ttgctcgccggcagcgatcccgcgcggctgcgcgattcgcccgacctcggcggcgacgtc
gccgcgctgttcgcgaacgcgtgcgacacggggctcgaagggctgatcggcaagcgcgcg
gattcccgctatcgcggcggccgctcgtccacgtggatcaagctgaaatgccggcgccgg
caggagttcgtgatcggcggctataccgagccgtcgggcagccggcacggcttcggcgcg
ctgctgctcggcgtccacgagccgcccgcgggcggcaagcggcagcgcggtgcggcgccg
ttgcgctatgtcggccgcgtcggcaccggcttcgatacgcgcatgctcgaccggctcgcc
gcgctgctgcgccggcacgaacgcgcgacgccgccgttcgatccgccgccgcgcgaacgt
tcccgcacgcgtgtccactgggtcgagccgacgctcgtcgccgaatgcgaattcgcggaa
tggacgggcgacggcatcgtgcggcaggctgcgttcatcgcgctgcgcgaagacaagccg
gcgcggcagatcgtccgcgaagtgccaaagccaaccggaacggagacgaccatgaacgaa
ccgcgcgaagcgcatgaatcttccccgccggcaagaaagacggacacggggcgcagaagc
gcgcgctcgtccgcgtcttcaggaaagtcgcacggcgaggccgccgaccacgtcggccgc
gtgcgcatcacgcaccccgaccgcgtgctcgacccgcaaagcggcacgcgcaagatcgat
ctcgcgcattactggcaatgggtcgcgccgtggctgctgccggacctgaagggccggccc
gtgtcgctcgtgcgcgccccgggcgacatcggcggcgagctgttcttccagaagcatgcg
gagcgccgcgagattccgttcgtcacgcagcacgacgggctcgacccgggccacggaccg
ctgctgtcgatcgacagcgtcgacgcgctgctcggcgccgcgcagatgggcacgatcgag
ctgcacacatggaacgcgcatgcgtcgaacatcgagcggccggaccgcatggtgttcgac
ctcgatcccgatccggcgctgccgtggcgcgcgatgatcgacgccgcgcagctcgtgcgc
gggctgctcgacgcgctcgggctcgtgtcgttctgcaagacgagcggcggcaaggggctg
cacgtcgtcgtgccgctcacgcgccacgcgggctgggacgacgtgaaggcattttcgcgc
gcggtggcccagcacgtcgccggcacgctgcccgagcgcttcacggcgacgatggggccg
cgtcaccggcgcggcaagatcttcgtcgactacctgcgcaacgggcgcggcgcgagcacg
atcgccgcgtactcggtgcgcgcgcggcccgggttgggcgtgtcggtgccgctcgactgg
gacgaggtgccgacgacgacgggcggcgcgcaatggacgatcgacacactgcacgagcgc
cttgacgcgctgacgcgcgacccgtgggaaggttatgcgaacgcgcgtcagcgcatcacc
gcggcgatgcgcgctgaactgggcgccgattcgtga

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