Brevundimonas mediterranea: GYM46_01980
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Entry
GYM46_01980 CDS
T06564
Name
(GenBank) DUF4982 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
bmed
Brevundimonas mediterranea
Pathway
bmed00052
Galactose metabolism
bmed00511
Other glycan degradation
bmed00600
Sphingolipid metabolism
bmed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bmed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
GYM46_01980
09103 Lipid metabolism
00600 Sphingolipid metabolism
GYM46_01980
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
GYM46_01980
Enzymes [BR:
bmed01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
GYM46_01980
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2_N
Glyco_hydro_2
Invasin_D3
Motif
Other DBs
NCBI-ProteinID:
QIH71851
UniProt:
A0A6G7EDY5
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All DBs
Position
401439..403898
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AA seq
819 aa
AA seq
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MQGATAAAVAAILPSTPALAATPETRRRIKLAFDWKFALGHAADIDKDFGFGRDQRTYAK
TGGSETSPIAEAAKADFDDSAWTDVQTPHDWAIDLPYDSTPRILAPDQDDPRAAHGFHAL
GRDHPENSVGWYRRPLDIPADWAGRRIGLEFDGAFRQVVVFVNGIIVDEHAGGYSPFRID
ITDVAQPGRPNWLTVRVDASLGEGWFYEGAGLYRHVWLTAANPVHVPPDGVFIRAEPQGS
GARATVEAAVRNQSDSSRTATVRTVVVAPNGLEKARREVMLSLAPWRNENADLALAWDVA
PLWSPADPQLHRLTTEIEIDGVVVDRIETPFGVRSAVFDAQRGFLLNGQPLKLLGACCHQ
DHAGVGAAIPDRLQDWRIEQLKAMGCNAYRASHNPAMPELMDACDRLGMLVIAETRRMSS
DEESMTELATLVRRDRNRPSVIAWSIGNEEQAIQGNETGAAIARTMKRLVNRLDPSRPVT
AAKDQDFDTGVSRVVDVLGFNYRTPQMEGYHARFPDQPILGSETGSTVSTRGEYVLDAAR
HIVPAYDREHPWWASTAEEWWTIAAERPYIAGGFIWTGFDYRGEPTPYSRWPSVGSYFGA
MDSCGFPKDNYWYYRAWWRPEPLLHLFPHWNWEGREGEEIEVWVHSNLDRVELFVNGRSV
GAKTVERNRHLAWSVPYAPGVLEARGYKNGHLVSTQRRETAGAPAALRLSVDRQRLTADG
EDVAMIATSVVDARGRPCPRANDLVAFEVAGDARVIGVGNGDPVSHEPDRSDRRHLFNGL
AQAIVQTGRKGGPITVTARADGLRPAVLRLDARNTKLST
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcgcaacggcggcggctgtggcggcgattcttccctcaaccccggccttggcg
gcgacgcccgagacccgacgacgcatcaagctggcgttcgattggaagttcgctctcggc
cacgcggcggacatcgacaaggatttcggcttcggtcgagatcaacgcacctacgccaaa
acgggcggctccgagacctcccccatcgccgaggcggcgaaggcggacttcgacgattcc
gcctggaccgacgtccagactccgcacgactgggcgatcgacctgccctacgattccacg
cctcgcatcctggcgcccgatcaggacgatccccgcgccgcgcatgggttccacgccctg
ggccgcgaccatcccgagaacagcgtcgggtggtaccgacgccccctggacatcccggcc
gactgggccggccgccgcatcggactggagttcgacggcgcgttccgccaggtcgtggtc
ttcgtcaacgggatcatcgtcgacgagcatgccggcggctattcgcccttccgcatcgac
atcaccgacgtggcgcaacccggccgccccaactggctgaccgtccgtgtggacgccagc
ttgggcgagggctggttctatgaaggcgcgggtctttaccgacatgtctggctgacggcg
gcgaacccggtccatgtgccccccgacggcgtgttcatccgggcggagccgcagggttcg
ggtgcacgggcgacggtcgaggcggccgtgcgcaaccagtcggactcgtctcgcacggcg
acggtgcgtaccgtcgtcgtggcgccgaacggcctggagaaggcgcgacgggaagtcatg
ctgtcgctggcgccctggaggaacgaaaacgccgacctggccctggcctgggacgttgct
cccctgtggtcgcccgccgatccccagctccatcggctgaccaccgaaatcgagatcgac
ggcgtcgtggtcgaccggatcgagacgcccttcggcgtccggtccgcggtcttcgacgcc
caacgcggcttcctgctcaatggacaaccgctgaaactgctcggcgcctgctgtcaccag
gaccacgccggcgtcggcgccgccatcccggatcggctccaggattggcggatcgaacag
ctgaaggccatgggctgcaacgcctatcgcgcctcgcataatccggccatgccggagctg
atggacgcctgcgaccggctgggaatgctggtcatcgccgagacgcggcgtatgtcctcc
gacgaagagtccatgacagagctggccaccctggtgcggcgcgaccgcaaccgaccctcg
gtcatcgcctggtcgatcggcaatgaagaacaggcgatccagggcaacgaaaccggcgcc
gccatcgcccgcaccatgaagcggctggtcaaccgcctggacccgtcccgccccgtcacg
gccgcaaaggaccaggacttcgacaccggcgtatcgcgcgtcgtcgacgttctgggcttc
aactatcgcaccccccagatggagggctatcacgcccgcttcccagatcagcccatcctc
ggcagcgagacgggcagcacggtctcgacccggggcgaatatgtgctggacgcggcccgg
cacatcgtccccgcctatgaccgcgaacacccctggtgggcctcgaccgccgaggaatgg
tggaccattgcggctgagcgcccctatatcgccggcggcttcatctggaccggcttcgac
tatcgcggcgaaccgacgccctacagccgttggcccagcgtcggctcctacttcggcgcc
atggactcctgcggcttcccgaaggacaattactggtactaccgcgcctggtggcggccc
gaaccgctgctgcacctgttcccgcactggaattgggaagggcgcgaaggcgaggagatc
gaggtctgggtccattccaacctggatcgcgtcgaactgttcgtgaacggccgctcggtc
ggagcgaagaccgtcgaacgcaatcgtcacctggcctggtccgtcccctatgcgccgggc
gtgctggaggcgcgcgggtacaagaatggtcacctagtctcgacccagcgtcgcgagacc
gccggcgccccggcggctctgcgtctgtccgttgatcgtcaacgattgactgccgacggc
gaggacgtggccatgatcgccaccagcgtcgtggacgcccgtggccgaccctgtccgcgc
gccaacgaccttgtcgccttcgaggttgcgggcgacgcccgggtcatcggcgtcggcaac
ggcgatcctgtcagccacgagccggatcgcagcgaccgccgacatctgttcaacggactg
gcccaggccatcgtccagacgggccgcaaaggcggccccatcaccgtcaccgcgcgggcc
gacgggctgcggcccgccgtgcttcgtctcgacgcccgcaacaccaaactatcgacctga
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