Bacillus mobilis: MLA2C4_01835
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Entry
MLA2C4_01835 CDS
T06928
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bmob
Bacillus mobilis
Pathway
bmob03030
DNA replication
bmob03410
Base excision repair
bmob03420
Nucleotide excision repair
bmob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MLA2C4_01835
03410 Base excision repair
MLA2C4_01835
03420 Nucleotide excision repair
MLA2C4_01835
03430 Mismatch repair
MLA2C4_01835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmob03032
]
MLA2C4_01835
03400 DNA repair and recombination proteins [BR:
bmob03400
]
MLA2C4_01835
Enzymes [BR:
bmob01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MLA2C4_01835
DNA replication proteins [BR:
bmob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MLA2C4_01835
DNA repair and recombination proteins [BR:
bmob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MLA2C4_01835
NER (nucleotide excision repair)
GGR (global genome repair) factors
MLA2C4_01835
MMR (mismatch excision repair)
DNA ligase
MLA2C4_01835
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MLA2C4_01835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
RNA_pol_A_CTD
HHH
PTCB-BRCT
BRCT_2
HHH_3
RNA_ligase
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AYF04513
LinkDB
All DBs
Position
338728..340737
Genome browser
AA seq
669 aa
AA seq
DB search
MSKEIAKQRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP
SIRVGGTVLDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDDANVRYICELKIDGL
AVSLHYEKGRFIQGATRGDGVTGEDITQNLKTIKAIPLRLNEEVTLEARGEAYMPKRSFV
KLNEEKEQNGEDVFANPRNAAAGSIRQLDPKIAAKRNLSMFVYGLANVEEKTIPSHSESL
DFLGELGFKTNPNRRTCETIEEVIAYVEEWQEKRPHLDYEIDGIVIKVDDVALQESLGTT
AKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNEDL
IREKDIRIGDYVVVKKAGDIIPEVVNVLFDKRTGEEEEYHMPTHCPACESELVRLEEEVA
LRCINPTCPAQIREGLIHFVSRNAMNIDGLGERVITQLFDADYIRTFADLYSLTKEQLLQ
LERFGEKSATNLVQAIENSKENSLERLLFGLGIRHVGAKAARTFAEHFETMDALVKATEE
ELKAINEIGEKMAQSVVTYFDNEDVLELLQQFKEYGVNMAYKGIKIADLQNVESYFAGKT
VVLTGKLEVMGRSEAKKKIEALGGKVTGSVSKSTDLVVAGEAAGSKLAQAEKHNVEVWNE
ERFLQELNK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagagatagcaaaacaacgtatagaagaactgcgtgatttgttaaatacattt
aactatcagtatcacgtattagacaatccttctgtttctgatgcggagtatgaccgtaat
atgcaggagcttataaaattagaagcagagaatccagagtttatgagtgaagactcgccc
tccattcgcgttggggggactgttcttgatatatttgaaaaagtaacacataaatcaccg
atgttaagtttaggaaatgcatttaacgaaggagatttacgtgatttcgaccgacgagta
cgccaaggaattgatgatgcgaatgtaagatatatatgcgaattaaaaattgacggactt
gctgtttcacttcattatgaaaaaggacgcttcattcaaggggcaacacgtggtgatggt
gtaacaggtgaagatattacccaaaatttaaaaacgattaaagcgatcccgctccgttta
aatgaagaagtaacgttagaagcacgaggcgaagcttatatgccgaagcgttcattcgtt
aagttaaatgaagaaaaagaacaaaatggtgaagatgtatttgcgaatccgcgtaatgcg
gcggcaggttcaatacgccaacttgatccgaaaattgcagcgaagcgtaacttatctatg
tttgtgtatggtcttgcgaatgtagaagaaaaaacaattccatcacatagtgaatcgctt
gatttcttaggtgaacttggattcaaaacaaatccaaatcgtcgtacatgtgaaacaatc
gaagaagttatagcttatgtagaagaatggcaagaaaaacgcccgcatcttgattatgag
attgatggaatcgttataaaagtagatgatgttgctcttcaagaaagtttaggaactaca
gcaaagagtccaagatgggcaattgcttataaattcccggctgaagaagttgtaacaaga
ttaacaggcattgaattaagtgttggtcgcacaggagttgtaacaccgacagcagagtta
gagccagtgcgagtggctggtactatcgttcgtcgtgcttctttacataacgaagattta
attcgtgaaaaggacattcgaattggtgactatgttgtagtgaagaaggccggagatatt
attcctgaagttgtgaacgttcttttcgataagcgtactggtgaggaagaagaatatcat
atgccaacgcattgcccagcatgtgagagtgaactagttcgtttagaagaagaagtagca
cttcgttgtataaatccaacttgtccagctcaaattcgagaagggttaattcatttcgtt
tcaagaaatgcaatgaatattgatggacttggagaacgtgtcattacacaactctttgat
gcggattatattcgtacatttgctgatttatattcgttgacgaaagagcaattattgcag
ctagaacgattcggtgaaaaatcagcaacgaatttagtgcaagcaattgagaattctaaa
gaaaactcattagagcgattattatttggccttggcattcgccatgtcggagcaaaagca
gcacgtacatttgcagagcatttcgaaacgatggatgcgcttgtgaaagcaacggaagaa
gaactaaaagcaattaatgagattggtgaaaaaatggctcaatctgtcgtgacgtatttt
gataatgaagatgtattagagttattacaacaatttaaagagtatggcgtgaatatggca
tacaaaggtataaaaattgctgatttacaaaatgttgagtcgtacttcgcaggaaaaact
gtcgttttaacaggtaaattagaagttatgggacgtagtgaagcgaagaagaagattgag
gcattaggtggaaaagtaacaggaagtgttagtaaaagtacggatttagttgttgcaggt
gaagcagcaggttcgaaattagcacaagcagagaagcataatgttgaggtttggaatgaa
gagaggttcttacaagagctaaataagtaa
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