Bacillus mojavensis: HC660_06980
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Entry
HC660_06980 CDS
T07122
Symbol
ligA
Name
(GenBank) DNA ligase (NAD-dependent)
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bmoj
Bacillus mojavensis
Pathway
bmoj03030
DNA replication
bmoj03410
Base excision repair
bmoj03420
Nucleotide excision repair
bmoj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HC660_06980 (ligA)
03410 Base excision repair
HC660_06980 (ligA)
03420 Nucleotide excision repair
HC660_06980 (ligA)
03430 Mismatch repair
HC660_06980 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmoj03032
]
HC660_06980 (ligA)
03400 DNA repair and recombination proteins [BR:
bmoj03400
]
HC660_06980 (ligA)
Enzymes [BR:
bmoj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
HC660_06980 (ligA)
DNA replication proteins [BR:
bmoj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HC660_06980 (ligA)
DNA repair and recombination proteins [BR:
bmoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
HC660_06980 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HC660_06980 (ligA)
MMR (mismatch excision repair)
DNA ligase
HC660_06980 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HC660_06980 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
HHH
PTCB-BRCT
BRCT_2
zf-NADH-PPase
RNA_pol_A_CTD
HHH_8
zf-IS66
HNOB
zf-tcix
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QJC95195
UniProt:
A0A6H2JMP1
LinkDB
All DBs
Position
706593..708599
Genome browser
AA seq
668 aa
AA seq
DB search
MDKETAKQRAEELRRTINKYSYEYYTLDEPSVPDAEYDRLMQELIAIEEEHPDLRTPDSP
TQRVGGAVLDAFQKVTHGTPMLSLGNAFNADDLRDFDRRVRQAVGDDVAYNVELKIDGLA
VSLRYEDGYFVRGATRGDGTTGEDITENLKTIRTIPLKMKRSLSIEVRGEAYMPKRSFEA
LNEERIKNEEEPFANPRNAAAGSLRQLDPKIAAKRNLDIFVYSIAELDEMGVETQSQGLD
FLDDIGFKTNQERKKCGSIEEVIAMIDELQAKRADLPYEIDGIVIKVDSLDQQEELGYTA
KSPRWAIAYKFPAEEVVTKLLDIELNVGRTGVITPTAILEPVKVAGTTVSRASLHNEDLI
KEKDIRILDKVVVKKAGDIIPEVVNVLVEQRTGEEKEFSMPTECPECGSELVRIEGEVAL
RCINPECPAQIREGLIHFVSRNAMNIDGLGERVITQLFQENLVRNVADLYKLTKEQVIQL
ERMGEKSTENLISSIQKSKENSLERLLFGLGIRFIGSKAAKTLAMHFESLDNLKKATIEE
LLAIDEIGEKMADAVITYFHKEEMLELLAELEELGVNTLYKGPKKVKAEDSDSYFAGKTI
VLTGKLEELSRNEAKAQIEALGGKMTGSVSKNTDLVIAGEAAGSKLSKAQELNIEVWNEE
QLIGELKK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagaaacagcgaagcagcgggcagaagaactgcgccgcaccatcaacaagtat
agctatgaatattacaccttagatgaaccgagcgtcccggatgccgaatacgacagattg
atgcaggagctgattgcgattgaggaggagcatccagacctcagaacgcctgattctcct
acacagcgtgtcggcggcgctgtgcttgatgcgtttcaaaaagtcactcacggcacgccg
atgctcagtctgggcaacgcgtttaatgctgacgatctccgcgactttgaccgccgtgtg
cgacaggccgtgggtgatgatgtggcgtataatgtggagctgaaaatagacggtcttgct
gtttctctccgttatgaagacggctattttgtcagaggcgcgacaagaggcgacgggacg
acgggagaggatattacggaaaatctgaaaacgatccgcactattccgctcaaaatgaaa
cgcagcctttcgattgaagtgcgaggagaggcgtatatgccgaagcgttcgtttgaagcg
ctcaatgaagaacggatcaaaaacgaggaagaaccgttcgcaaatccgcgcaatgccgct
gcgggatcactcagacagctcgaccctaaaattgcggcgaaacgaaatctcgatatcttc
gtctacagtatagcggagcttgacgaaatgggtgtggagacacaaagccaaggacttgat
tttctcgacgacatcggctttaaaacgaaccaggaacggaaaaaatgcggcagcatagaa
gaagtcattgcgatgatcgatgagcttcaagcgaaacgcgccgatctcccgtatgaaatt
gacggcattgtcatcaaagtggattctctcgatcagcaggaggagctcggctatacggcg
aaaagcccgcgctgggccattgcgtataagtttcctgcagaagaggtcgtgaccaagctt
ctcgatatcgaattaaatgtcggaagaacgggtgtgattacgccgaccgcgattcttgag
ccggtaaaagttgccgggacaacggtctcaagagcatcccttcataacgaagatttaatt
aaagagaaggatatccggattttggataaggtagtcgtcaaaaaagcgggcgatattata
cctgaagtcgtgaacgttctcgttgaacagcgcacgggggaagaaaaggaattcagcatg
ccgacagaatgccctgaatgcggcagtgaactcgtccgcattgaaggagaagtggcactt
cgctgcatcaatcctgaatgccctgcacaaatcagagaagggctgattcattttgtctcc
cgcaatgccatgaacattgacgggcttggcgaacgagtgatcacacagctgtttcaggag
aatctcgtccgaaatgtggcagatttgtataagctgacgaaggaacaggtgattcagctc
gaacgcatgggcgaaaaatcaactgaaaacctgatcagctctatacaaaaatcaaaggaa
aattcattagagcgcctgttattcggcctcggcatccgatttatcggctcgaaggctgca
aagacgctcgccatgcactttgaaagcttggacaatctgaaaaaagctaccatagaggaa
cttctcgcaatagatgaaatcggtgaaaaaatggctgacgcagtcattacctatttccat
aaagaagaaatgctcgagcttttggccgaacttgaggagcttggcgtaaacacactttat
aaaggtccgaaaaaagtaaaagcagaggacagcgattcctattttgcaggcaaaaccatc
gttctgacaggaaagttggaagagctgtcaagaaacgaagcgaaagcgcaaattgaagcg
ctcggcggaaagatgactggaagcgtcagcaaaaacacagacttggtcatcgccggagaa
gcggcgggaagcaagctgtcaaaagcgcaagagctgaacattgaagtgtggaatgaagaa
cagttaataggagagctaaagaaataa
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