Bombyx mori (domestic silkworm): 101738468
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Entry
101738468 CDS
T02817
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
bmor
Bombyx mori (domestic silkworm)
Pathway
bmor03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bmor00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101738468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmor03021
]
101738468
Transcription machinery [BR:
bmor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
101738468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
101738468
NCBI-ProteinID:
XP_012552862
UniProt:
A0A8R2GBJ4
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Position
15:complement(15603755..15617342)
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AA seq
508 aa
AA seq
DB search
MSTPGSSTTPAATVQEYKIRVPKNVKKKYHVMRFNATLNVDFAKWTHVKMERENNSKEFK
GAEEEMPKFGAGSEYGRDMREEARRKKFGIISRKYKPEDQPWILKVGGKTGKKFKGIREG
GVSENAAYYVFTHAADGAIDAYPLQEWYNFQPIQRYKALSAEEAEQEFGRRNKVMNFFSL
MLRKRLRGVDDADEEDPDEKKAKGKAKKDLKISEMDEWIDSDDASSDSGAGEKEKEEDSD
SGAKKKKKGKGPPPKKKRKVNDEAFEESDDGDEEGREKDYVSDSSESESDHETKTNKELK
GVAEEDALRKLLTSDEDSEEEQEQKQESEHEDEPTKEGEERASKLTKKKKKTDETKKDSS
SDFSSDSDTEPEAGNTKKPKKSKNADKNAGAGASGAAGGGGAGAAGGEAAAPSAAAAAVA
AAAAASAQQPPSKRPKLDASYTECGVTEEAVRRYLARKPMTTTELLTKFKSKRTGVSSER
LVETMTQILKRINPLKQNINGKMYLSIK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctacacctggaagtagtacgacaccggccgccacagtacaggagtataaaataaga
gtgccaaagaatgtaaagaagaagtatcatgttatgaggttcaatgccacattgaatgta
gattttgcaaaatggactcatgtcaagatggagcgagagaacaacagcaaagaattcaaa
ggagctgaagaggaaatgcccaaatttggtgcaggctcggaatacggacgggacatgcgt
gaggaagcacgtcgcaagaaattcggtataatatcaagaaagtacaaaccggaagaccag
ccgtggatcctgaaagtcggtggaaagaccggcaagaaattcaaaggtattcgtgaaggt
ggagtatcagagaatgctgcatattatgtgttcactcacgcagcggatggcgcaatagac
gcctatccactccaggaatggtacaatttccaaccgattcagagatacaaagcgctgtca
gctgaagaagccgaacaggaatttggcaggcgtaacaaggttatgaatttcttctcgttg
atgttacggaaacggctccgcggagtcgacgatgcagacgaagaggacccagacgaaaag
aaagctaaagggaaagctaaaaaagacctcaagatatccgagatggacgaatggatagac
tccgacgacgcttcctcggactccggtgctggtgaaaaagaaaaggaagaggacagtgac
tccggggccaaaaagaagaaaaagggtaaaggtccgccccccaagaagaagcgaaaagta
aatgacgaagcgttcgaagagagcgacgacggggacgaggagggtcgggagaaggactac
gtgtccgactcctcggagagtgaatcggatcacgaaactaaaactaataaggaactcaaa
ggagtggcagaagaagacgcgctcaggaaactgctgacttccgacgaagactccgaagag
gagcaggagcagaaacaggagtcggaacacgaggacgagcccacgaaggaaggcgaagag
agagccagcaagctcaccaagaaaaagaagaaaactgacgaaactaaaaaagattcgagc
agcgacttcagttcggactctgacacggagcccgaggctggcaacacaaagaagccgaag
aagagtaagaacgccgacaagaacgcgggcgccggtgcctcgggagcagcgggcggcggc
ggggcgggggctgcgggcggggaggcggcggctcccagcgcggcggcggcggcggtggcg
gcggcggcggcggcgagcgcgcagcaaccgcccagcaagagacccaagctcgacgcctcg
tacaccgaatgcggggtgacggaagaggcggtgagaaggtacttggcgaggaagccgatg
accacgactgagctgctcaccaagttcaaatcgaaacgcaccggagtcagcagcgagcgc
ttggtcgaaaccatgacgcagatactgaagaggatcaaccctttgaagcagaacatcaac
gggaaaatgtacctcagcattaaatga
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